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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42874

Naturalized species drive functional trait shifts in plant communities Naturalized species drive functional trait shifts in plant communities

Despite decades of research documenting the consequences of naturalized and invasive plant species on ecosystem functions, our understanding of the functional underpinnings of these changes remains rudimentary. This is partially due to ineffective scaling of trait differences between native and naturalized species to whole plant communities. Working with data from over 75,000 plots and...
Authors
Magda Garbowski, Daniel L. McLaughlin, Dana M. Blumenthal, Helen Sofaer, David Barnett, Evelyn M. Beaury, Daniel Buonaiuto, Jeff Corbin, Jeffrey Dukes, Regan Early, Andrea Nebhut, Lais Petri, Montserrat Vila, Ian S. Pearse

Survey effort and targeted landbird community metrics at Indiana lowland forest restoration sites Survey effort and targeted landbird community metrics at Indiana lowland forest restoration sites

Many sampling and analytical methods can estimate the abundance, distributions, and diversity of birds and other wildlife. However, challenges with sample size and analytical capacity can make these methods difficult to implement for resource-limited monitoring programs. To apprise efficient and attainable sampling designs for landbird monitoring programs with limited observational data...
Authors
Benjamin M West, Mark L. Wildhaber, Nicholas S. Green, John P. Isanhart, M. Victoria McDonald, Michael J. Hooper

Free-roaming horses exceeding appropriate management levels affect multiple vital rates in greater sage-grouse Free-roaming horses exceeding appropriate management levels affect multiple vital rates in greater sage-grouse

Since the passage of the Wild Free-Roaming Horses and Burros Act of 1971, federal agencies have been responsible for managing free-roaming equids in the United States. Over the last 20 years, management has been hampered by direct opposition from advocacy groups, budget limitations, and a decline in the public’s willingness to adopt free-roaming horses (Equus caballus). As a result, free...
Authors
Jeffrey L. Beck, Megan C. Milligan, Kurt T. Smith, Phillip A. Street, Aaron C. Pratt, Christopher P. Kirol, Caitlyn P. Wanner, Jacob D. Hennig, Jonathan B. Dinkins, J. Derek Scasta, Peter S. Coates

Climate, hydrology, and nutrients control the seasonality of Si concentrations in rivers Climate, hydrology, and nutrients control the seasonality of Si concentrations in rivers

The seasonal behavior of fluvial dissolved silica (DSi) concentrations, termed DSi regime, mediates the timing of DSi delivery to downstream waters and thus governs river biogeochemical function and aquatic community condition. Previous work identified five distinct DSi regimes across rivers spanning the Northern Hemisphere, with many rivers exhibiting multiple DSi regimes over time...
Authors
Keira Johnson, Kathi Jo Jankowski, Joanna C. Carey, Lienne R. Sethna, Sidney A. Bush, Diane M. McKnight, William H. McDowell, Adam S. Wymore, Pirkko Kortelainen, Jeremy B. Jones, Nicholas Lyon, Hjalmar Laudon, Amanda Poste, Pamela L. Sullivan

Nitrogen fixation and fertilization have similar effects on biomass allocation in nitrogen-fixing plants Nitrogen fixation and fertilization have similar effects on biomass allocation in nitrogen-fixing plants

Plants adjust their allocation to different organs based on nutrient supply. In some plant species, symbioses with nitrogen-fixing bacteria that live in root nodules provide an alternate pathway for nitrogen acquisition. Does access to nitrogen-fixing bacteria modify plants' biomass allocation? We hypothesized that access to nitrogen-fixing bacteria would have the same effect on...
Authors
DNL Menge, A. P. Wolfe, J. Funk, Steven S. Perakis, K.A. Carreras Pereira

Quantifying the importance of ontogeny and prey type in modeling top-down and bottom-up effects of an ectothermic predator Quantifying the importance of ontogeny and prey type in modeling top-down and bottom-up effects of an ectothermic predator

Dietary decisions by predators can affect prey abundance and overall food web dynamics. Many predators do not forage on the same prey at the same frequency throughout their lives. Ontogenetic shifts in prey preference are not, however, often accounted for when modeling food web relationships, despite growing literature that suggests that stage specific dietary relationships may be an...
Authors
Melia Gail Nafus, Levi Gray

Synchrony of alewife, Alosa pseudoharengus, year-class strength in the Great Lakes region Synchrony of alewife, Alosa pseudoharengus, year-class strength in the Great Lakes region

Fish recruitment is interannually variable and challenging to predict. Annual recruitment is often regionally synchronized among populations and identifying drivers of such synchrony may help shed light on recruitment dynamics. We investigated interannual variation of alewife Alosa pseudoharengus recruitment by estimating year-class strength for populations from three of the Laurentian...
Authors
Les D. Warren, Andrew Edgar Honsey, David B. Bunnell, Paris D. Collingsworth, Darryl W. Hondorp, Charles P. Madenjian, David Warner, Brian Weidel, Tomas O. Hook

An integrative paradigm for building causal knowledge An integrative paradigm for building causal knowledge

A core aspiration of the ecological sciences is to determine how systems work, which implies the challenge of developing a causal understanding. Causal inference has long been approached from a statistical perspective, which can be limited and restrictive for a variety of reasons. Ecologists and other natural scientists have historically pursued mechanistic knowledge as an alternative...
Authors
James Grace

Pathology of tissue loss in three key gorgonian species in the Mediterranean Sea Pathology of tissue loss in three key gorgonian species in the Mediterranean Sea

The Mediterranean is known for its marine biodiversity, especially gorgonian forests. Unfortunately, these are experiencing rapid declines due to climate change, manifested by repeated marine heat waves resulting in mass mortality events since the early 1990 s. To better understand why gorgonians are declining, more systematic approaches to investigate the exact causes are needed, and...
Authors
Jacopo Gobbato, Thierry M. Work, Martina P. Facchinelli, Federica M. Siena, Enrico Montalbetti, Davide Seveso, Yohan D. Luisa, Paolo Galli, Simone Montano

Informative priors can account for location uncertainty in stop-level analyses of the North American Breeding Bird Survey (BBS), allowing fine-scale ecological analyses Informative priors can account for location uncertainty in stop-level analyses of the North American Breeding Bird Survey (BBS), allowing fine-scale ecological analyses

Ecological inferences are often based on the locations at which species are present, but many species records have substantial uncertainty in spatial metadata, limiting their utility for fine-scale analyses. This is especially prevalent in historical records such as museum specimens, and in some citizen-science data. For example, the North American Breeding Bird Survey (BBS) has 55+...
Authors
Ryan C. Burner, Alan Kirschbaum, J. A. Hostetler, David Ziolkowski, Nicholas M. Anich, Daniel Turek, Eli D. Striegel, Neal D. Niemuth

Bay Miwok evening primrose: A new subspecies of Oenothera deltoides (Onagraceae) endemic to California Bay Miwok evening primrose: A new subspecies of Oenothera deltoides (Onagraceae) endemic to California

California contains exceptional biodiversity in geography and plant life, including numerous endemic species, some of which are cryptic. The Oenothera deltoides Torr. & Frém. species complex represents a prime example of cryptic diversity. Here, we recognize a new subspecies of Oenothera deltoides, O. deltoides subsp. julpunensis S.F.Jones, subsp. nov., that is a local endemic of...
Authors
Scott F. Jones, Elizabeth R. Milano, Ryan O’Dell, Molly Ferrell, Amy G. Vandergast, Karen M. Thorne

Identifying Pareto-efficient eradication strategies for invasive populations Identifying Pareto-efficient eradication strategies for invasive populations

Invasive species are a major cause of biodiversity loss and are notoriously expensive and challenging to manage. We developed a decision-analytic framework for evaluating invasive species removal strategies, given objectives of maximizing eradication probability and minimizing costs. The framework uses an existing estimation model for spatially referenced removal data—one of the most...
Authors
Amy A. Yackel Adams, Nathan J. Hostetter, William A. Link, Sarah J. Converse
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