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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42701

Paramyxoviruses of fish Paramyxoviruses of fish

The first fish paramyxovirus was isolated from normal adult Chinook salmon returning to a coastal hatchery in Oregon in the fall of 1982. Subsequently, the virus was isolated from other stocks of adult Chinook salmon and one stock of adult coho salmon in California, Oregon, Washington, and Alaska, leading to its designation as the Pacific salmon paramyxovirus (PsaPV). The slow-growing...
Authors
Ted R. Meyers, William N. Batts

Hepeviruses of aquatic organisms Hepeviruses of aquatic organisms

Originally reported in California, the cutthroat trout virus (CTV) has now been isolated from nine species of salmonids in North America. Early work focused on the replication and physical characteristics of the virus, but 20 years later was determined to be most closely related to the hepatitis E virus. The small genome is positive-sense, single-stranded RNA similar to other members of...
Authors
William N. Batts

Using integrated step selection to determine effects of predation risk on bison habitat selection and movement Using integrated step selection to determine effects of predation risk on bison habitat selection and movement

Animal movement is a fundamental mechanism that shapes communities and ecosystems. Ungulates alter the ecosystems they inhabit and understanding their movements and distribution is critical for linking habitat with population dynamics. Predation risk has been shown to strongly influence ungulate movement patterns, such that ungulates may select habitat where predation risk is lower...
Authors
Skye Salganek, Kathryn A. Schoenecker, Miranda L.N. Terwilliger

Modeling the potential habitat gained by planting sagebrush in burned landscapes Modeling the potential habitat gained by planting sagebrush in burned landscapes

Many revegetation projects are intended to benefit wildlife species. Yet, there are few a priori evaluations that assess the potential efficiency of restoration actions in recovering wildlife habitats. We developed a spatial vegetation–habitat recovery model to gauge the degree to which field planting strategies could be expected to recover multi-factor habitat conditions for wildlife...
Authors
Julie A. Heinrichs, Michael S. O’Donnell, Elizabeth Kari Orning, David A. Pyke, Mark A. Ricca, Peter S. Coates, Cameron L. Aldridge

Rising seas could cross thresholds for initiating coastal wetland drowning within decades across much of the United States Rising seas could cross thresholds for initiating coastal wetland drowning within decades across much of the United States

Accelerated sea-level rise is an existential threat to coastal wetlands, but the timing and extent of wetland drowning are debated. Recent data syntheses have clarified future relative sea-level rise exposure and sensitivity thresholds for drowning. Here, we integrate these advances to estimate when and where rising sea levels could cross thresholds for initiating wetland drowning across...
Authors
Michael Osland, Bogdan Chivoiu, James Grace, Nicholas Enwright, Glenn R. Guntenspergen, Kevin Buffington, Karen M. Thorne, Joel A. Carr, William V. Sweet, Brady Couvillion

Epidemiological modeling of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) reveals conditions for introduction and widespread transmission Epidemiological modeling of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) reveals conditions for introduction and widespread transmission

Emerging infectious diseases with zoonotic potential often have complex socioecological dynamics and limited ecological data, requiring integration of epidemiological modeling with surveillance. Although our understanding of SARS-CoV-2 has advanced considerably since its detection in late 2019, the factors influencing its introduction and transmission in wildlife hosts, particularly...
Authors
Elias Rosenblatt, Jonathan D. Cook, Graziella Vittoria DiRenzo, Evan H. Campbell Grant, Fernando Arce, Kimberly M Pepin, F. Javiera Rudolph, Michael C. Runge, Susan A. Shriner, Daniel P. Walsh, Brittany A. Mosher

Comparative toxicity of emulsifiable concentrate and suspension concentrate formulations of 2′,5-dichloro-4′-nitrosalicylanilide ethanolamine salt Comparative toxicity of emulsifiable concentrate and suspension concentrate formulations of 2′,5-dichloro-4′-nitrosalicylanilide ethanolamine salt

The 2-aminoethanol salt of niclosamide (2′,5-dichloro-4′-nitrosalicylanilide) is a pesticide known as Bayluscide that is used in conjunction with TFM (4-nitro-3-[trifluoromethyl]phenol), also known as 3-trifluoromethyl-4-nitrophenol) to treat tributaries to the Great Lakes infested with invasive parasitic Petromyzon marinus (sea lamprey). Adding 0.5 to 2 percent Bayluscide with TFM can
Authors
James A. Luoma, Justin R. Schueller, Nicholas Schloesser, Courtney Kirkeeng, Samantha L. Wolfe

Silver Chub spawning confirmed in the Maumee River, a tributary of Lake Erie Silver Chub spawning confirmed in the Maumee River, a tributary of Lake Erie

Objective Biodiversity is declining due to invasive species and other factors that can affect individual species differently. Silver Chub Macrhybopsis storeriana are declining in their native range, and their conservation status in the Great Lakes ranges from secure to possibly extirpated. Lake Erie once supported a large Silver Chub population until it crashed in the 1950s. Additionally...
Authors
Ryan E. Brown, Christine M. Mayer, Nathan Thompson, Corbin David Hilling, James Roberts, Catherine A. Richter

Sero-epidemiology of Highly Pathogenic Avian Influenza viruses among wild birds in subarctic intercontinental transition zones Sero-epidemiology of Highly Pathogenic Avian Influenza viruses among wild birds in subarctic intercontinental transition zones

Background: The geographic expansion and evolution of A/Goose/Guangdong/1/1996(H5N1) (Gs/GD) lineage H5Nx highly pathogenic avian influenza (HPAI) viruses since 1996 have raised awareness of enzootic circulation among migratory birds and the potential for intercontinental transport and spread. Recent Pacific- and Atlantic-route introductions of HPAI to North America were facilitated by...
Authors
Jonathon D. Gass, Robert J. Dusek, Nichola J. Hill, Laura Borkenhagen, Jeffrey S. Hall, Gunnar Thor Hallgrimsson, Mary Anne Bishop, Andrew M. Ramey, Timothy J. Spivey, Solvi Runar Vignisson, Sunna Bjork Ragnarsdottir, Halldor Palmar Halldorsson, Jon Einar Jonsson, Alexa D. Simulynas, Felicia B. Nutter, Wendy B. Puryear, Jonathan A. Runstadler

Drought as an emergent driver of ecological transformation in the twenty-first century Drought as an emergent driver of ecological transformation in the twenty-first century

Under climate change, ecosystems are experiencing novel drought regimes, often in combination with stressors that reduce resilience and amplify drought’s impacts. Consequently, drought appears increasingly likely to push systems beyond important physiological and ecological thresholds, resulting in substantial changes in ecosystem characteristics persisting long after drought ends (i.e
Authors
Wynne Emily Moss, Shelley Crausbay, Imtiaz Rangwala, Jay Wason, Clay Trauernicht, Camille S. Stevens-Rumann, Anna Sala, Caitlin M. Rottler, Gregory T. Pederson, Brian W. Miller, Dawn Magness, Jeremy Littell, Lee Frelich, Abby G. Frazier, Kimberly R. Davis, Jonathan Coop, Jennifer M. Cartwright, Robert K Booth

Vegetation-generated turbulence does not impact the erosion of natural cohesive sediment Vegetation-generated turbulence does not impact the erosion of natural cohesive sediment

Previous studies have demonstrated that vegetation-generated turbulence can enhance erosion rate and reduce the velocity threshold for erosion of non-cohesive sediment. This study considered whether vegetation-generated turbulence had a similar influence on natural cohesive sediment. Cores were collected from a black mangrove forest with aboveground biomass and exposed to stepwise...
Authors
Autumn R. Deitrick, David K. Ralston, Christopher R. Esposito, Melissa Millman Baustian, Maricel Beltran Burgos, Andrew J. Courtois, Heidi M. Nepf

Diet of Myotis ciliolabrum from six sites in the southwestern United States Diet of Myotis ciliolabrum from six sites in the southwestern United States

With bat populations declining in many parts of the world, detailed life history information will be critical for assessing vulnerabilities of bat populations and associated trophic effects. Myotis ciliolabrum (western small-footed bat) is a species of insectivorous bat distributed from the Great Plains to the Pacific Coast and from British Columbia to Central Mexico. The species is...
Authors
Ashley E Loehn, Dale W. Sparks, Ernest W. Valdez
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