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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Evidence for interannual persistence of infectious influenza A viruses in Alaska wetlands Evidence for interannual persistence of infectious influenza A viruses in Alaska wetlands

Influenza A viruses (IAVs) deposited by wild birds into the environment may lead to sporadic mortality events and economically costly outbreaks among domestic birds. There is a paucity of information, however, regarding the persistence of infectious IAVs within the environment following deposition. In this investigation, we assessed the persistence of 12 IAVs that were present in the...
Authors
Andrew M. Ramey, Andrew B. Reeves, Benjamin Joel Lagasse, Vijay P. Patil, Laura E. Hubbard, Dana W. Kolpin, R. Blaine McCleskey, Deborah A. Repert, David E. Stallknecht, Rebecca L. Poulson

A protocol for modelling generalised biological responses using latent variables in structural equation models A protocol for modelling generalised biological responses using latent variables in structural equation models

In this paper we consider the problem of how to quantitatively characterize the degree to which a study object exhibits a generalized response. By generalized response, we mean a multivariate response where numerous individual properties change in concerted fashion due to some internal integration. In latent variable structural equation modeling (LVSEM), we would typically approach this...
Authors
James B. Grace, Magdalena Steiner

Instrumental variable methods in structural equation models Instrumental variable methods in structural equation models

Instrumental variable regression (RegIV) provides a means for detecting and correcting parameter bias in causal models. Widely used in economics, recently several papers have highlighted its potential utility for ecological applications. Little attention has thus far been paid to the fact that IV methods can also be implemented within structural equation models (SEMIV). In this paper I...
Authors
James Grace

Conservation of northwestern and southwestern pond turtles: Threats, population size estimates, and population viability analysis Conservation of northwestern and southwestern pond turtles: Threats, population size estimates, and population viability analysis

Accurate status assessments of long-lived, widely distributed taxa depend on the availability of long-term monitoring data from multiple populations. However, monitoring populations across large temporal and spatial scales is often beyond the scope of any one researcher or research group. Consequently, wildlife managers may be tasked with utilizing limited information from different...
Authors
Stephanie Manzo, E. Griffin Nicholson, Devereux. Zachary, Robert N. Fisher, Christopher W. Brown, Peter A Scott, H. Bradley Shaffer

How to increase the supply of native seed to improve restoration success: The US native seed development process How to increase the supply of native seed to improve restoration success: The US native seed development process

With the United Nations Decade on Ecosystem Restoration, restoration of damaged ecosystems is turning into a global movement. Restoration actions that are not based on science and an understanding of ecosystem function can thwart desired restoration outcomes at best and cause further damage to ecosystems at worst. Restoration often includes revegetation using seed. Where we source seed...
Authors
Molly Lutisha Mccormick, Amanda N. Carr, Robert Massatti, Daniel E. Winkler, Patricia De Angelis, Peggy Olwell

Contemporary and historic dynamics of lake whitefish (Coregonus clupeaformis) eggs, larvae, and juveniles suggest recruitment bottleneck during first growing season Contemporary and historic dynamics of lake whitefish (Coregonus clupeaformis) eggs, larvae, and juveniles suggest recruitment bottleneck during first growing season

To determine if a survival bottleneck occurs in Lake Erie's lake whitefish (Coregonus clupeaformis) population and explore possible mechanisms responsible, we examined contemporary and historical dynamics of lake whitefish eggs, larvae and juveniles. Widespread spawning and low overwinter egg retention were observed in 2016–2018, however subsequent larval CPUE remained consistent with...
Authors
Z. Amidon, Robin DeBruyne, Edward F. Roseman, Christine Mayer

Extreme precipitation and flooding contribute to sudden vegetation dieback in a coastal salt marsh Extreme precipitation and flooding contribute to sudden vegetation dieback in a coastal salt marsh

Climate extremes are becoming more frequent with global climate change and have the potential to cause major ecological regime shifts. Along the northern Gulf of Mexico, a coastal wetland in Texas suffered sudden vegetation dieback following an extreme precipitation and flooding event associated with Hurricane Harvey in 2017. Historical salt marsh dieback events have been linked to...
Authors
Camille Stagg, Michael Osland, Jena A. Moon, Laura Feher, Claudia Laurenzano, Tiffany C. Lane, William Jones, Stephen Hartley

Towards building a sustainable future: Positioning ecological modelling for impact in ecosystems management Towards building a sustainable future: Positioning ecological modelling for impact in ecosystems management

As many ecosystems worldwide are in peril, efforts to manage them sustainably require scientific advice. While numerous researchers around the world use a great variety of models to understand ecological dynamics and their responses to disturbances, only a small fraction of these models are ever used to inform ecosystem management. There seems to be a perception that ecological models...
Authors
Don DeAngelis, Daniel Franco, Alan Hastings, Frank M. Hilker, Suzanne Lenhart, Frithjof Lutscher, Natalia Petrovskaya, Sergei Petrovskii, Rebecca C. Tyson

Demographic modeling informs functional connectivity and management interventions in Graham’s beardtongue Demographic modeling informs functional connectivity and management interventions in Graham’s beardtongue

Functional connectivity (i.e., the movement of individuals across a landscape) is essential for the maintenance of genetic variation and persistence of rare species. However, illuminating the processes influencing functional connectivity and ultimately translating this knowledge into management practice remains a fundamental challenge. Here, we combine various population structure...
Authors
Matthew Richard Jones, Daniel E. Winkler, Robert Massatti

Growth of greater white-fronted goose goslings relates to population dynamics at multiple scales Growth of greater white-fronted goose goslings relates to population dynamics at multiple scales

The abundance of greater white-fronted geese (Anser albifrons frontalis) on the Arctic Coastal Plain (ACP) of northern Alaska, USA, has more than tripled since the late 1990s; however, recent rate of annual population growth has declined as population size increased, which may indicate white-fronted geese on the ACP are approaching carrying capacity. We examined rates of gosling growth...
Authors
Thomas F Fondell, Brandt W. Meixell, Paul L. Flint

Gut microbiota associated with different sea lamprey (Petromyzon marinus) life stages Gut microbiota associated with different sea lamprey (Petromyzon marinus) life stages

Sea lamprey (SL; Petromyzon marinus), one of the oldest living vertebrates, have a complex metamorphic life cycle. Following hatching, SL transition into a microphagous, sediment burrowing larval stage, and after 2–10+ years, the larvae undergo a dramatic metamorphosis, transforming into parasitic juveniles that feed on blood and bodily fluids of fishes; adult lamprey cease feeding...
Authors
P Mathai, Muruleedhara Byappanahalli, Nicholas S. Johnson, Michael J. Sadowsky

First documentation of long-distance travel by a Florida manatee to the Mexican Caribbean First documentation of long-distance travel by a Florida manatee to the Mexican Caribbean

West Indian manatees (Trichechus manatus) are separated into two allopatric subspecies: the Florida manatee (T. m. latirostris) and the Antillean manatee (T. m. manatus). In the winter of 2020–2021, an adult manatee was sighted off the coast of Cancun, Quintana Roo, Mexico, in areas where Antillean manatees are not typically seen. The individual had distinct watercraft scars on its body...
Authors
Nataly Castelblanco-Martinez, Anmari Álvarez-Alemán, Raul Torres, Amy L. Teague, Sheri Barton, Kari A Rood, Eric A Ramos, Antonio A. Mignucci-Giannoni
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