Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42884
Loggerhead sea turtle (Caretta caretta) diving changes with productivity, behavioral mode, and sea surface temperature Loggerhead sea turtle (Caretta caretta) diving changes with productivity, behavioral mode, and sea surface temperature
The relationship between dive behavior and oceanographic conditions is not well understood for marine predators, especially sea turtles. We tagged loggerhead turtles (Caretta caretta) with satellite-linked depth loggers in the Gulf of Mexico, where there is a minimal amount of dive data for this species. We tested for associations between four measurements of dive behavior (total daily...
Authors
Autumn Iverson, Ikuko Fujisaki, Margaret M. Lamont, Kristen Hart
Climatic correlates of white pine blister rust infection in whitebark pine in the Greater Yellowstone Ecosystem Climatic correlates of white pine blister rust infection in whitebark pine in the Greater Yellowstone Ecosystem
Whitebark pine, a foundation species at tree line in the Western U.S. and Canada, has declined due to native mountain pine beetle epidemics, wildfire, and white pine blister rust. These declines are concerning for the multitude of ecosystem and human benefits provided by this species. Understanding climatic correlates associated with spread is needed to successfully manage impacts from...
Authors
David Thoma, Erin K. Shanahan, Kathryn Irvine
Developing a decision-support process for landscape conservation design Developing a decision-support process for landscape conservation design
Planning for sustainable landscapes is hampered by uncertainty in how species will respond to conservation actions amidst impacts from landscape and climate change. Planning decisions, including tradeoffs among competing species objectives, are complex. We developed a decision-support framework that integrates dynamic-landscape metapopulation models (DLMPs) and structured decision making...
Authors
Thomas W. Bonnot, D. Todd Jones-Farrand, Frank R. Thompson III, Joshua J. Millspaugh, Jane A. Fitzgerald, Nate Muenks, Phillip Hanberry, Esther Stroh, Larry Heggemann, Allison Fowler, Mark Howery, Shea Hammond, Kristine Evans
Survival and density of a dominant fish species across a gradient of urbanization in North Carolina tidal creeks Survival and density of a dominant fish species across a gradient of urbanization in North Carolina tidal creeks
Development in the southeastern U.S. coastal plain generates the need for a better understanding of how demographics (survival and abundance) of estuarine nekton respond to urbanization. Apparent survival and density of the dominant Atlantic coast salt marsh fish, Fundulus heteroclitus, were estimated in four North Carolina tidal creeks using a model simultaneously fitted to mark-resight...
Authors
Paul J Rudershausen, Joseph E Hightower, Jeffery A Buckel, Matthew J. O’Donnell, Todd Dubreuil, Benjamin H. Letcher
The emerging contaminant 3,3’-dichlorobiphenyl (PCB-11) impedes Ahr activation and Cyp1a activity to modify embryotoxicity of Ahr ligands in the zebrafish embryo model (Danio rerio) The emerging contaminant 3,3’-dichlorobiphenyl (PCB-11) impedes Ahr activation and Cyp1a activity to modify embryotoxicity of Ahr ligands in the zebrafish embryo model (Danio rerio)
Background: 3,3’-Dichlorobiphenyl (PCB-11) is a non-legacy PCB congener widely detected in environmental samples and has been detected in human serum, but its toxicity potential is poorly understood. Objectives: We measured PCB-11 in wild caught fish and assessed its embryotoxicity and interactions with the aryl hydrocarbon receptor (Ahr) pathway in developing zebrafish (Danio rerio)...
Authors
Monika A Roy, Karilyn E Sant, Olivia L Venezia, Alix B Shipman, Stephen D. McCormick, Alicia R Timme-Laragy
Speaking the same language: Can the Sustainable Development Goals translate the needs of inland fisheries into irrigation decisions? Speaking the same language: Can the Sustainable Development Goals translate the needs of inland fisheries into irrigation decisions?
Irrigated agriculture and inland fisheries both make important contributions to food security, nutrition, livelihoods, and well-being. Typically, in modern irrigation systems, these components operate independently. Some practices, commonly associated with water use and intensification of crop production, can be in direct conflict with and have adverse impacts on fisheries. Food security
Authors
Abigail Lynch, Lee J. Baumgartner, Craig A. Boys, John Conallin, Ian. G. Cowx, C. Max Finlayson, Paul A. Franklin, Zeb Hogan, John D. Koehn, Matthrew P. McCartney, Gordon C. O’Brien, Kaviphone Phouthavong, Luiz G. M. Silva, Chann Aun Tob, John Valbo-Jorgensen, An Vi Vu, Louise Whiting, Arif Wibowo, Phil Duncan
Global change-driven use of onshore habitat impacts polar bear faecal microbiota Global change-driven use of onshore habitat impacts polar bear faecal microbiota
The gut microbiota plays a critical role in host health, yet remains poorly studied in wild species. Polar bears (Ursus maritimus), key indicators of Arctic ecosystem health and environmental change, are currently affected by rapid shifts in habitat that may alter gut homeostasis. Declining sea ice has led to a divide in the southern Beaufort Sea polar bear subpopulation such that an...
Authors
Sophie Watson, Heidi Hauffe, Matthew Bull, Todd C. Atwood, Melissa McKinney, Massimo Pindo, Sarah Perkins
De facto reuse and disinfection by-products in drinking water systems in the Shenandoah River watershed De facto reuse and disinfection by-products in drinking water systems in the Shenandoah River watershed
De facto reuse is increasingly being studied among the variety of stressors that are relevant to drinking water systems that obtain their source water from surface waters. De facto reuse may influence the levels and types of precursors relevant to formation of disinfection by-products (DBPs) in surface water systems. DBPs such as trihalomethanes (THMs) and haloacetic acids (HAAs) have...
Authors
Richard J Weisman, Larry B. Barber, Jennifer Rapp, Celso M Ferreira
A mosaic of estuarine habitat types with prey resources from multiple environmental strata supports a diversified foraging portfolio for juvenile Chinook salmon A mosaic of estuarine habitat types with prey resources from multiple environmental strata supports a diversified foraging portfolio for juvenile Chinook salmon
Estuaries provide vital nursery habitat for threatened Chinook salmon (Oncorhynchus tshawytscha) by promoting an ecological portfolio effect, whereby multiple habitat types and environmental strata maximize foraging opportunities for out-migrating salmon by varying the abundance and composition of prey through space and time. To study this portfolio effect, we evaluated the foraging...
Authors
Isa Woo, Melanie J. Davis, Christopher S. Ellings, Sayre Hodgson, John Y. Takekawa, Glynnis Nakai, Susan E.W. De La Cruz
Passive restoration of vegetation and biological soil crusts following 80 years of exclusion from grazing across the Great Basin Passive restoration of vegetation and biological soil crusts following 80 years of exclusion from grazing across the Great Basin
Restoration targets for biological soil crusts are largely unknown. We surveyed seven 80‐year‐old grazing exclosures across northern Nevada for biocrusts to quantify reference conditions at relatively undisturbed sites. Exclosures were associated with the following plant communities: Wyoming big sagebrush, black sagebrush, and areas co‐dominated by winterfat and Wyoming big sagebrush...
Authors
Lea A. Condon, Nicole Pietrasiak, Roger Rosentreter, David A. Pyke
Quantifying trends and uncertainty in prehistoric forest composition Quantifying trends and uncertainty in prehistoric forest composition
Forest ecosystems in eastern North America were in flux over the last several thousand years, well before Euro-American land clearance and the 20th-century onset of anthropogenic climate change. However, the magnitude and uncertainty of prehistoric vegetation change have been difficult to quantify because of the multiple ecological, dispersal, and sedimentary processes that govern the...
Authors
Andria Dawson, Christopher J. Paciorek, Simon Goring, Stephen Jackson, Jason S. McLachlan, John W. Williams
Artificial intelligence and avian influenza: Using machine learning to enhance active surveillance for avian influenza viruses Artificial intelligence and avian influenza: Using machine learning to enhance active surveillance for avian influenza viruses
Influenza A viruses are one of the most significant viral groups globally with substantial impacts on human, domestic animal and wildlife health. Wild birds are the natural reservoirs for these viruses, and active surveillance within wild bird populations provides critical information about viral evolution forming the basis of risk assessments and countermeasure development...
Authors
Daniel P. Walsh, Ting Fung Ma, S. Ip, Jun Zhu