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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 43023

El Niño increases high‐tide flooding in tidal wetlands along the U.S. Pacific coast. El Niño increases high‐tide flooding in tidal wetlands along the U.S. Pacific coast.

Periodic oscillations between El Niño and La Niña conditions in the Pacific Basin affect oceanographic and meteorological phenomena globally, with impacts on the abundance and distribution of marine species. However, El Niño effects on estuarine hydrology and tidal wetland processes have seldom been examined rigorously. We used detailed wetland elevation and local inundation data from 10...
Authors
Arianna Goodman, Karen M. Thorne, Kevin J. Buffington, Chase M. Freeman, Christopher N. Janousek

A review of coastal management approaches to support the integration of ecological and human community planning for climate change A review of coastal management approaches to support the integration of ecological and human community planning for climate change

The resilience of socio-ecological systems to sea level rise, storms and flooding can be enhanced when coastal habitats are used as natural infrastructure. Grey infrastructure has long been used for coastal flood protection but can lead to unintended negative impacts. Natural infrastructure often provides similar services as well as added benefits that support short- and long-term...
Authors
Emily J. Powell, Megan C. Tyrrell, Andrew Milliken, John M. Tirpak, Michelle D. Staudinger

Rhizophagy cycle: An oxidative process in plants for nutrient extraction from symbiotic microbes Rhizophagy cycle: An oxidative process in plants for nutrient extraction from symbiotic microbes

In this paper, we describe a mechanism for the transfer of nutrients from symbiotic microbes (bacteria and fungi) to host plant roots that we term the ‘rhizophagy cycle.’ In the rhizophagy cycle, microbes alternate between a root intracellular endophytic phase and a free-living soil phase. Microbes acquire soil nutrients in the free-living soil phase; nutrients are extracted through...
Authors
James F. White, Kathryn L. Kingsley, Satish Kumar Verma, Kurt P. Kowalski

Mapping the relationships between trail conditions and experiential elements of long-distance hiking Mapping the relationships between trail conditions and experiential elements of long-distance hiking

Trail users that experience acceptable social and ecological conditions are more likely to act as trail stewards, exhibit proper trail etiquette, and use low-impact practices. However, the relationships between specific trail conditions and experiential elements of long-distance hiking are not well understood. Therefore, the purpose of this study was to identify how trail conditions...
Authors
Brian A. Peterson, Matthew T.J. Brownlee, Jeffrey L. Marion

Integrated diet analyses reveal contrasting trophic niches for wild and hatchery juvenile Chinook Salmon in a large river delta Integrated diet analyses reveal contrasting trophic niches for wild and hatchery juvenile Chinook Salmon in a large river delta

Hatchery programs have been used as a conservation tool to bolster declining populations of Chinook Salmon Oncorhynchus tshawytscha along much of the North American Pacific coast. In many watersheds, hatchery stocks are released concurrently with the wild population, thus raising the potential for density‐dependent effects. Competition for prey resources during the critical period for...
Authors
Melanie J. Davis, Isa Woo, Christopher S. Ellings, Sayre Hodgson, David A. Beauchamp, Glynnis Nakai, Susan E.W. De La Cruz

Mercury and lead exposure in avian scavengers from the Pacific Northwest suggest risks to California condors: Implications for reintroduction and recovery Mercury and lead exposure in avian scavengers from the Pacific Northwest suggest risks to California condors: Implications for reintroduction and recovery

Mercury (Hg) and lead (Pb) are widespread contaminants that pose risks to avian scavengers. In fact, Pb exposure is the primary factor limiting population recovery in the endangered California condor (Gymnogyps californianus) and Hg can impair avian reproduction at environmentally relevant exposures. The Pacific Northwest region of the US was historically part of the condor's native...
Authors
Garth Herring, Collin A. Eagles-Smith, Daniel E. Varland

Weathering of oil in a surficial aquifer Weathering of oil in a surficial aquifer

The composition of crude oil in a surficial aquifer was determined in two locations at the Bemidji, MN, spill site. The abundances of 71 individual hydrocarbons varied within 16 locations sampled. Little depletion of these hydrocarbons (relative to the pipeline oil) occurred in the first 10 years after the spill, whereas losses of 25% to 85% of the total measured hydrocarbons occurred...
Authors
Mary Jo Baedecker, Robert P. Eganhouse, Haiping Qi, Isabelle M. Cozzarelli, Jared J. Trost, Barbara A. Bekins

Microbial community composition of a hydrocarbon reservoir 40 years after a CO2 enhanced oil recovery flood Microbial community composition of a hydrocarbon reservoir 40 years after a CO2 enhanced oil recovery flood

Injecting CO2 into depleted oil reservoirs to extract additional crude oil is a common enhanced oil recovery (CO2-EOR) technique. However, little is known about how in situ microbial communities may be impacted by CO2 flooding, or if any permanent microbiological changes occur after flooding has ceased. Formation water was collected from an oil field that was flooded for CO2-EOR in the...
Authors
Jenna L. Shelton, Robert S. Andrews, Denise M. Akob, Christina A. DeVera, Adam C. Mumford, John E. McCray, Jennifer C. McIntosh

Exploring the amphibian exposome in an agricultural landscape using telemetry and passive sampling Exploring the amphibian exposome in an agricultural landscape using telemetry and passive sampling

This is the first field study of its kind to combine radio telemetry, passive samplers, and pesticide accumulation in tissues to characterize the amphibian exposome as it relates to pesticides. Understanding how habitat drives exposure in individuals (i.e., their exposome), and how that relates to individual health is critical to managing species in an agricultural landscape where...
Authors
Jennifer E. Swanson, Erin L. Muths, Clay Pierce, Stephen J. Dinsmore, Mark W. Vandever, Michelle L. Hladik, Kelly L. Smalling

Toward salt marsh harvest mouse recovery: A review Toward salt marsh harvest mouse recovery: A review

The salt marsh harvest mouse (SMHM, Reithrodontomys raviventris) is an endangered species, endemic to the San Francisco Estuary. Despite being protected for almost half a century and being included in a large number of recovery, restoration, and management plans, significant data gaps hinder conservation and management of the species, a challenge further complicated by developing threats...
Authors
Katherine R. Smith, Melissa K. Riley, Laureen Barthman-Thompson, Isa Woo, Mark J. Statham, Sarah Estrella, Douglas A. Kelt

Exotic invasive Pomacea maculata (Giant Apple Snail) will depredate eggs of frog and toad species of the Southeastern US Exotic invasive Pomacea maculata (Giant Apple Snail) will depredate eggs of frog and toad species of the Southeastern US

Pomacea maculata (Perry) (Giant Apple Snail) is a freshwater snail native to South America (Hayes et al. 2015) that is an invasive species in the freshwater wetlands and waterways of the northern Gulf of Mexico, peninsular Florida (Benson 2017, Burks 2017) and globally (Hayes et al. 2015). Karraker and Dudgeon (2014) found that Pomacea canaliculata (Lamarck) (Channeled Apple Snail)
Authors
Jacoby Carter, Darren Johnson, Sergio Merino

Aquatic vegetation responses to island construction (habitat restoration) in a large floodplain river Aquatic vegetation responses to island construction (habitat restoration) in a large floodplain river

The Upper Mississippi River is maintained in its current navigable state through impoundments, dredging, and other engineering projects. These stressors, along with anthropogenic impacts and natural system processes, led to declines in aquatic vegetation and the loss of fish and wildlife habitat, with a major downturn the late 1980s and early 1990s. Large‐scale restoration projects, such...
Authors
Deanne C. Drake, Brian R. Gray, Nora Forbes
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