Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42704
Global synthesis of the documented and projected effects of climate change on inland fishes Global synthesis of the documented and projected effects of climate change on inland fishes
Although climate change is an important factor affecting inland fishes globally, a comprehensive review of how climate change has impacted and will continue to impact inland fishes worldwide does not currently exist. We conducted an extensive, systematic primary literature review to identify English-language, peer-reviewed journal publications with projected and documented examples of...
Authors
Bonnie Myers, Abigail Lynch, David B. Bunnell, Cindy Chu, Jeffrey A. Falke, Ryan Kovach, Trevor J. Krabbenhoft, Thomas J. Kwak, Craig P. Paukert
Seasonal movements of the Short-eared Owl (Asio flammeus) in western North America as revealed by satellite telemetry Seasonal movements of the Short-eared Owl (Asio flammeus) in western North America as revealed by satellite telemetry
The Short-eared Owl (Asio flammeus) is a widespread raptor whose abundance and distribution fluctuates in response to the varying amplitudes of its prey, which are predominately microtines. Previous efforts to describe the seasonal movements of Short-eared Owls have been hindered by few band recoveries and the species' cryptic and irruptive behavior. We attached satellite transmitters to...
Authors
James A. Johnson, Travis L. Booms, Lucas H. DeCicco, David C. Douglas
Book review: Reptiles and amphibians: Self-assessment color review Book review: Reptiles and amphibians: Self-assessment color review
No abstract available. Book information: Reptiles and Amphibians: Self-Assessment Color Review. 2nd Edition. By Fredric L. Frye. CRC Press, Taylor and Francis Group, Boca Raton, Florida USA. 2015. 252 pp. ISBN 9781482257601.
Authors
David E. Green
Serosurvey for West Nile virus antibodies in Steller's Jays (Cyanocitta stelleri) captured in coastal California Serosurvey for West Nile virus antibodies in Steller's Jays (Cyanocitta stelleri) captured in coastal California
West Nile virus (WNV) was first detected in New York in 1999 and, during its expansion across the continental US, southern Canada, and Mexico, members of the Corvidae (ravens, crows, magpies, and jays) were frequently infected and highly susceptible to the virus. As part of a behavioral study of Steller's Jays (Cyanocitta stelleri) conducted from 2011–2014 in the coastal California...
Authors
Elena West, Erik K. Hofmeister, M. Zach Peery
Responses of juvenile black-tailed prairie dogs (Cynomys ludovicianus) to a commercially produced oral plague vaccine delivered at two doses Responses of juvenile black-tailed prairie dogs (Cynomys ludovicianus) to a commercially produced oral plague vaccine delivered at two doses
We confirmed safety and immunogenicity of mass-produced vaccine baits carrying an experimental, commercial-source plague vaccine (RCN-F1/V307) expressing Yersinia pestis V and F1 antigens. Forty-five juvenile black-tailed prairie dogs (Cynomys ludovicianus) were randomly divided into three treatment groups (n=15 animals/group). Animals in the first group received one standard-dose...
Authors
Elsa M. Cardenas-Canales, Lisa L. Wolfe, Tripp. Daniel W., Tonie E. Rocke, Rachel C. Abbott, Michael W. Miller
Transcriptional response to West Nile virus infection in the zebra finch (Taeniopygia guttata) Transcriptional response to West Nile virus infection in the zebra finch (Taeniopygia guttata)
West Nile virus (WNV) is a widespread arbovirus that imposes a significant cost to both human and wildlife health. WNV exists in a bird-mosquito transmission cycle in which passerine birds act as the primary reservoir host. As a public health concern, the mammalian immune response to WNV has been studied in detail. Little, however, is known about the avian immune response to WNV. Avian...
Authors
Daniel J. Newhouse, Erik K. Hofmeister, Christopher N. Balakrishnan
Investigation of plastic debris ingestion by four species of sea turtles collected as bycatch in pelagic Pacific longline fisheries Investigation of plastic debris ingestion by four species of sea turtles collected as bycatch in pelagic Pacific longline fisheries
Ingestion of marine debris is an established threat to sea turtles. The amount, type, color and location of ingested plastics in the gastrointestinal tracts of 55 sea turtles from Pacific longline fisheries from 2012 to 2016 were quantified, and compared across species, turtle length, body condition, sex, capture location, season and year. Six approaches for quantifying amounts of...
Authors
Katherine E. Clukey, Christopher A. Lepczyk, George H. Balazs, Thierry M. Work, Jennifer M. Lynch
Potential for water borne and invertebrate transmission of West Nile virus in the Great Salt Lake, Utah Potential for water borne and invertebrate transmission of West Nile virus in the Great Salt Lake, Utah
In November and December of 2013, a large mortality event involving 15,000 - 20,000 eared grebes (Podiceps nigricollis) occurred at the Great Salt Lake (GSL), UT. The onset of the outbreak in grebes was followed by a mortality event in > 86 bald eagles (Haliaeetus leucocephalus). During the die-off, West Nile virus (WNV) was detected by RT-PCR or viral culture in carcasses of grebes and...
Authors
Melissa Lund, Valerie I. Shearn-Bochsler, Robert J. Dusek, Jan Shivers, Erik K. Hofmeister
Seasonal and diel environmental conditions predict western pond turtle (Emys marmorata) behavior at a perennial and an ephemeral stream in Sequoia National Park, California Seasonal and diel environmental conditions predict western pond turtle (Emys marmorata) behavior at a perennial and an ephemeral stream in Sequoia National Park, California
Managers making decisions may benefit from a well-informed understanding of a species' population size and trends. Given the cryptic nature and habitat characteristics of the western pond turtle (Emys marmorata), however, imperfect detection may be high and population estimates are frequently varied and unreliable. As a case study to investigate this issue, we used temperature...
Authors
Gabrielle Ruso, Erik Meyer, Adrian J. Das
Linking occupancy surveys with habitat characteristics to estimate abundance and distribution in an endangered cryptic bird Linking occupancy surveys with habitat characteristics to estimate abundance and distribution in an endangered cryptic bird
Accurate estimates of the distribution and abundance of endangered species are crucial to determine their status and plan recovery options, but such estimates are often difficult to obtain for species with low detection probabilities or that occur in inaccessible habitats. The Puaiohi (Myadestes palmeri) is a cryptic species endemic to Kauaʻi, Hawai‘i, and restricted to high elevation...
Authors
Lisa H. Crampton, Kevin W. Brinck, Kyle E. Pias, Barbara A. P. Heindl, Thomas Savre, Julia S. Diegmann, Eben H. Paxton
Natural infections with pigeon paramyxovirus serotype 1: Pathologic changes in Eurasian collared-doves (Streptopelia decaocto) and rock pigeons (Columba livia) in the United States Natural infections with pigeon paramyxovirus serotype 1: Pathologic changes in Eurasian collared-doves (Streptopelia decaocto) and rock pigeons (Columba livia) in the United States
Pigeon paramyxovirus serotype 1 (PPMV-1) is a globally distributed, virulent member of the avian paramyxovirus serotype 1 serogroup that causes mortality in columbiformes and poultry. Following introduction into the United States in the mid-1980s, PPMV-1 rapidly spread causing numerous mortality events in Eurasian collared-doves (Streptopelia decaocto) (ECDOs) and rock pigeons (Columba...
Authors
Marcos Isidoro Ayza, C.L. Afonso, J.B. Stanton, Susan Knowles, S. Ip, C. LeAnn White, Heather Fenton, M.G. Ruder, A. C. Dolinski, Julia S. Lankton
Lambdapapillomavirus 2 in a gray wolf (Canis lupus) from Minnesota with oral papillomatosis and sarcoptic mange Lambdapapillomavirus 2 in a gray wolf (Canis lupus) from Minnesota with oral papillomatosis and sarcoptic mange
Oral papillomatosis was diagnosed in a gray wolf (Canis lupus) with sarcoptic mange from Minnesota, USA found dead in February 2015. Intranuclear inclusion bodies were evident histologically, and papillomaviral antigens were confirmed using immunohistochemistry. Sequencing of the L1 papillomavirus gene showed closest similarity to Lambdapapillomavirus 2.
Authors
Susan Knowles, Steve K. Windels, Marie Adams, Jeffrey S. Hall