Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42878
Leveraging extensive soil, vegetation, fire, and land treatment data to inform restoration across the sagebrush biome Leveraging extensive soil, vegetation, fire, and land treatment data to inform restoration across the sagebrush biome
Context Widespread ecological degradation has prompted calls for massive global investments in ecological restoration, yet limited resources necessitate efficient application of restoration efforts. In western North America, altered fire regimes are increasing the scale of restoration needed to preserve the sagebrush (Artemisia species) biome but prioritizing and implementing effective...
Authors
Bryan C. Tarbox, Adrian P. Monroe, Michelle I. Jeffries, Justin L. Welty, Michael S. O’Donnell, Robert Arkle, David S. Pilliod, Peter S. Coates, Julie A. Heinrichs, Daniel Manier, Cameron L. Aldridge
Glucocorticoid and glycemic responses to immune challenge in a viviparous snake afflicted with an emerging mycosis Glucocorticoid and glycemic responses to immune challenge in a viviparous snake afflicted with an emerging mycosis
Disease may be both a cause and consequence of stress, and physiological responses to infectious disease may involve stress coping mechanisms that have important fitness consequences. For example, glucocorticoid and glycemic responses may affect host fitness by altering resource allocation and use in hosts, and these responses may be affected by competing stressors. To better understand...
Authors
Craig M. Lind, Joseph Agugliaro, Jason Ortega, Jenna N. Palmisano, Jeffrey M. Lorch, Tran Truong, Terence M. Farrell
Detection and transport of environmental DNA from two federally endangered mussels Detection and transport of environmental DNA from two federally endangered mussels
Environmental DNA (eDNA) offers a novel approach to supplement traditional surveys and provide increased spatial and temporal information on species detection, and it can be especially beneficial for detecting at risk or threatened species with minimal impact on the target species. The transport of eDNA in lotic environments is an important component in providing more informed...
Authors
Brandon James Sansom, Dannise Vannesa Ruiz-Ramos, Nathan Thompson, Maura O Roberts, Zachary Taylor, Katie Ortiz, Jess W. Jones, Catherine A. Richter, Katy E. Klymus
Predation of Lost River and Shortnose suckers by piscivorous colonial waterbirds in the Upper Klamath Basin: An analysis of predation effects during 2021–2023 Predation of Lost River and Shortnose suckers by piscivorous colonial waterbirds in the Upper Klamath Basin: An analysis of predation effects during 2021–2023
Previously published research indicated that predation by piscivorous colonial waterbirds in the Upper Klamath Basin was a source of mortality for Lost River suckers (Deltistes luxatus) and Shortnose suckers (Chasmistes brevirostris), including mortality of Sucker Assisted Rearing Program (SARP) fish. Avian predation on recently released Chinook Salmon (Oncorhynchus tshawytscha) in the...
Authors
Nathan B Banet, Quinn Payton, Allen Evans, Rachael Katelyn Paul-Wilson, Jacob Richard Krause, Brian S. Hayes, Erin Marie Benham
Reproductive ecology and egg parasitism of the Samoan swallowtail butterfly Reproductive ecology and egg parasitism of the Samoan swallowtail butterfly
We investigated the reproductive ecology and effects of egg parasitism on the Samoan swallowtail butterfly (Papilio godeffroyi), which survives only on Tutuila Island, American Samoa, after having disappeared from the much larger islands of Upolu and Savai‘i in independent Samoa. During monthly surveys of its only known host plant, Micromelum minutum, across eight sites in 2013 and 2014...
Authors
Paul C. Banko, Mark A. Schmaedick, Robert W. Peck, Adam C. Miles, Niela Leifi
Egg size scales negatively with system size in a periodic fish species Egg size scales negatively with system size in a periodic fish species
Optimal egg size theory implies that female organisms balance between fecundity and individual offspring investment according to their environment. Past interspecific studies suggest that fishes in large marine systems generally produce smaller eggs than those in small freshwater systems. We tested whether intraspecific egg size variation reflected a similar pattern by comparing egg size...
Authors
Scott T Koenigbauer, Zachary S. Feiner, Benjamin Dickinson, Stephanie L. Shaw, Zoe Almeida, Mark Richard Dufour, Alexander James Gatch, Claire Schraidt, Tomas O. Hook
The Interagency Coordinating Committee on the validation of alternative methods (ICCVAM) The Interagency Coordinating Committee on the validation of alternative methods (ICCVAM)
Many ICCVAM member agencies are developing new technologies and resources to replace the use of animals for chemical safety testing. These include new platforms such as microphysiological systems (MPS), data resources to support the development of predictive models and quantitative structure–activity relationships (QSARs), and web tools to facilitate data access and visualization.
Authors
Barnett A. Rattner, Timothy Bargar, Paula F. P. Henry
The role of geography, diet, and host phylogeny on the gut microbiome in the Hawaiian honeycreeper radiation The role of geography, diet, and host phylogeny on the gut microbiome in the Hawaiian honeycreeper radiation
The animal gut microbiome can have a strong influence on the health, fitness, and behavior of its hosts. The composition of the gut microbial community can be influenced by factors such as diet, environment, and evolutionary history (phylosymbiosis). However, the relative influence of these factors is unknown in most bird species. Furthermore, phylosymbiosis studies have largely focused...
Authors
Maria Constantini, Elin Videvall, Jeffrey T. Foster, Matthew Medeiros, John Gillece, Eben H. Paxton, Lisa H. Crampton, Hannah Mounce, Alexander Wang, Robert C. Fleischer, Michael G. Campana, Floyd Reed
Direct measurements of firn-density evolution from 2016 to 2022 at Wolverine Glacier, Alaska Direct measurements of firn-density evolution from 2016 to 2022 at Wolverine Glacier, Alaska
Knowledge of snow and firn-density change is needed to use elevation-change measurements to estimate glacier mass change. Additionally, firn-density evolution on glaciers is closely connected to meltwater percolation, refreezing and runoff, which are key processes for glacier mass balance and hydrology. Since 2016, the U.S. Geological Survey Benchmark Glacier Project has recovered firn...
Authors
Max Stevens, Louis C. Sass, Caitlyn Florentine, Christopher J. McNeil, Emily Baker, Katherine Eleanore Bollen
Most pinyon-juniper woodland species distributions are projected to shrink rather than shift under climate change Most pinyon-juniper woodland species distributions are projected to shrink rather than shift under climate change
Pinyon–juniper (PJ) woodlands are among the most widespread ecosystems in rangelands of western North America, supporting diverse wildlife habitat, recreation, grazing, and cultural/spiritual enrichment. Anticipating future distribution shifts under changing climate will be critical to climate adaptation and conservation efforts in these ecosystems. Here, we evaluate drivers of PJ tree...
Authors
Adam Roy Noel, Daniel Rodolphe Schlaepfer, Bradley J. Butterfield, M.C. Swan, J. Michael Norris, K. Hartwig, Michael C. Duniway, John B. Bradford
Demographic risk factors vary in the invasion front of chronic wasting disease in West Virginia, USA Demographic risk factors vary in the invasion front of chronic wasting disease in West Virginia, USA
After detecting chronic wasting disease (CWD) in white-tailed deer (Odocoileus virginianus) in Hampshire County, West Virginia, USA, in 2005, we investigated the change of CWD apparent prevalence and potential factors influencing infection risk during the invasion front. Over eight sampling years (2006–2012 and 2017) during a 12-yr period within a 101-km2-area monitoring zone, we sampled...
Authors
Brian Scott Dugovich, Ethan P. Barton, James M. Crum, M. Kevin Keel, David E. Stallknecht, Mark G. Ruder