Fundamental Science Practices Frequently Asked Questions
How is approval granted and what documents at a minimum must be submitted to the approving official?
What Federal Government policies require the release of scientific data, and how does the USGS intend to meet these requirements?
What is considered USGS scientific software and what are the USGS requirements for releasing it?
The frequently asked questions (FAQs) represent a Bureau consensus to ensure interpretations of Fundamental Science Practices (FSP) policies are uniformly applied throughout the USGS. These FAQs provide further explanation of the FSP and related publishing policies, as well as describe the procedures and decision making necessary to meet the policy requirements.
FSP Background
FSP Background
Authorship
Authorship
Review
Review
Approval
Approval
USGS Publication Series
USGS Publication Series
Journal Publications
Journal Publications
Metadata
Metadata
Data
Data
Software
Software
Project Reporting and Cooperator Publications
Project Reporting and Cooperator Publications
Web Pages, Conferences, Abstracts, and Presentations
Web Pages, Conferences, Abstracts, and Presentations
Preprints
Preprints
The FAQs will be updated as necessary and changes in the form of additions or revisions are reflected by date (month/year) as they occur. Questions about the FSP that are not addressed here should be directed to gs_fspac@usgs.gov.
FSP Frequently Asked Questions
FSP Frequently Asked Questions
Filter Total Items: 207
What is the relationship between a project work plan and a DMP? [128] What is the relationship between a project work plan and a DMP? [128]
The overall project work plan of every research project must include a DMP. [Read more]
Where can I find some DMP examples? [129] Where can I find some DMP examples? [129]
DMP examples from various institutions can be found at https://dmptool.org/.
What tools are available to help me create my DMP? [130] What tools are available to help me create my DMP? [130]
The USGS Data Management website provides guidance on developing DMPs and understanding data management best practices. [Read more]
Can a Science Center-wide plan be leveraged for my project-specific DMP? [131] Can a Science Center-wide plan be leveraged for my project-specific DMP? [131]
Yes. Some centers have developed guidance for data management. It is important that project-specific details are captured in the DMP. [Read more]
What if I do not know all the details of how my data will be managed? [132] What if I do not know all the details of how my data will be managed? [132]
A data management plan (DMP) is helpful for staff in your program or center thinking about and become committed to data management responsibilities before a project begins. You may need data management input from other staff and experts. If data management details change, your DMP should be updated to reflect those changes. [Read more]
Who is responsible for ensuring that DMPs are developed and implemented for each project within a center or office? [133] Who is responsible for ensuring that DMPs are developed and implemented for each project within a center or office? [133]
Science Center Directors or their designees ensure compliance with data management requirements for data produced in their centers or offices and consult with other managers, scientists, and staff as needed with regard to carrying out data management activities, including ensuring the development of data management plans. [Read more]
What is considered USGS scientific software and what are the USGS requirements for releasing it? [134] What is considered USGS scientific software and what are the USGS requirements for releasing it? [134]
Scientific software is a discrete package of computer code and documentation that contains source code implementing scientific algorithms or producing scientific data. All USGS scientific software products intended for public release are reviewed and approved in accordance with USGS FSP requirements. [Read more]
When does a software release product require a version number? [135] When does a software release product require a version number? [135]
Because software may be further developed and subsequently updated after the original version is released, all revised software should be released with a new version number. Although the approach to version numbering can vary, revised software releases can be grouped into three general categories: major revision, minor revision, and patch. [Read more]
Can I contribute code to open source projects, and if so, how should I identify and document my contributions? [136] Can I contribute code to open source projects, and if so, how should I identify and document my contributions? [136]
Yes. Software produced by the USGS and released publicly is in the public domain. However, some software may be partially or wholly owned by a non-Federal partner (e.g., university) and may elect to apply a license, including an open source license that includes restrictions. USGS employees have several options to navigate these circumstances. [Read more]
My software release repository requires an open-source license. What can I use? What do I need to know about licenses? [137] My software release repository requires an open-source license. What can I use? What do I need to know about licenses? [137]
The software developer needs to have an understanding of the repository’s open source licensing requirements; several licensing options may be considered. [Read more]
What is required to comply with Federal Source Code Policy? [138] What is required to comply with Federal Source Code Policy? [138]
Generally, source code associated with USGS software releases must be made available at minimum for Federal Government-wide reuse. Source code for USGS software releases must include an appropriate open-source license or secured re-use rights; be included in the USGS source code inventory; be accompanied by documentation to facilitate reuse and participation by third parties. [Read more]
Do software releases need a DOI? [139] Do software releases need a DOI? [139]
Yes. Approved USGS software releases must be assigned a DOI with the 10.5066 prefix using the USGS Digital Object Identifier (DOI) Creation Tool. Software release products should be assigned a meaningful resource type in the DOI metadata such as software, model, workflow, or another appropriate term. The DOI metadata must appropriately describe the software product. [Read more]
What are some reasons to not use a public repository for developing software? [140] What are some reasons to not use a public repository for developing software? [140]
Department of the Interior, including USGS, applies strict requirements and platform authorizations for sharing software in public repositories. To avoid potential violations, policy-compliant and secure internal code repositories are available for sharing and releasing software. [Read more]
What is the distinction in software release requirements between scripts used to prepare data for analysis or graphical visualizations and models or other packages of source code? [141] What is the distinction in software release requirements between scripts used to prepare data for analysis or graphical visualizations and models or other packages of source code? [141]
Author should work together with their supervisor and Science Center Director to determine if a set of source code is appropriate for release as a USGS scientific software release or if the algorithms or statistical methods would alternatively be more appropriate for inclusion in an associated manuscript or the metadata of a data release. [Read more]
What hosting platforms are available for releasing USGS scientific software? [142] What hosting platforms are available for releasing USGS scientific software? [142]
The authoritative (or reference) copy of an approved USGS scientific software release must be distributed through a “.gov” server to comply with USGS open access requirements. USGS Git hosting platform is available, including USGS OpenSource GitLab, or USGS InnerSource GitLab, which can be restricted to a specific group of collaborators. [Read more]
Where can I find additional information about managing and releasing USGS software? [143] Where can I find additional information about managing and releasing USGS software? [143]
Refer to the Software Management website for additional information, including best practices and guidance related to the management and release of USGS software.
What if a USGS coauthor finds out from the non-USGS lead author that the scientific information product has been accepted by the journal and will be published more quickly than expected? [144] What if a USGS coauthor finds out from the non-USGS lead author that the scientific information product has been accepted by the journal and will be published more quickly than expected? [144]
Inform your supervisor, Center Director, and BAO to expedite review and approvals; BAOs may be able to move the product up in their queues. Manuscripts that will be posted online as soon as they are received by the journal should obtain Bureau approval prior to submission. To avoid these situations, discuss the USGS FSP process with coauthors before a manuscript is sent to a journal. [Read more]
Why must the accepted manuscript be placed in the IPDS after it is published by the journal? [145] Why must the accepted manuscript be placed in the IPDS after it is published by the journal? [145]
The IPDS serves as an archive for short-term, temporary records. In the event the journal does not provide free public access, the accepted manuscript that is placed in the IPDS can be provided to the public through the USGS Publications Warehouse. This will ensure the USGS meets the OSTP public access requirement for federally funded research. [Read more]
Under what circumstances should products in the Restricted-File Federal Interagency Report (RFFIR) series (formerly Administrative Report series) be prepared? [146] Under what circumstances should products in the Restricted-File Federal Interagency Report (RFFIR) series (formerly Administrative Report series) be prepared? [146]
These limited-use publication series products are prepared when directed by USGS management in concert with or independent of a request from a U.S. Government agency, foreign government or agency, or international entity funding partner. RFFIRs are directed and (or) requested when investigations involve threatened or endangered species or are in support of confidential negotiations or litigation.
What are the possible format options for RFFIRs? [147] What are the possible format options for RFFIRs? [147]
A letter report is one possible format for a Restricted-File Federal Interagency Report (RFFIR). An optional template for RFFIRs is available. [Read more]
As an author, what is my responsibility for maintaining official copies of my Bureau-approved RFFIR? [149] As an author, what is my responsibility for maintaining official copies of my Bureau-approved RFFIR? [149]
A printed copy of each Restricted-File Federal Interagency Report (RFFIR) must be sent to the USGS Library (Reston) for the Library’s limited-access storage. Another copy of the RFFIR should be maintained with other project material in accordance with the Department’s policy regarding official records. [Read more]