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Coastal Multibeam Bathymetry and Backscatter Data Collected in May 2023 From Seven Mile Island, New Jersey Coastal Multibeam Bathymetry and Backscatter Data Collected in May 2023 From Seven Mile Island, New Jersey
Scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center in St. Petersburg, Florida (USGS – SPCSMC), conducted a nearshore geophysical survey offshore of Seven Mile Island, New Jersey, during May 2023. Multibeam bathymetry and acoustic backscatter data were collected aboard the research vessel (R/V) Sallenger. The survey was supported by the National...
Coastal Multibeam Bathymetry Data Collected in August 2022 From Breton Island, Louisiana Coastal Multibeam Bathymetry Data Collected in August 2022 From Breton Island, Louisiana
As part of the restoration monitoring component of the Deepwater Horizon early restoration project, scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center in St. Petersburg, Florida (USGS–SPCSMC), conducted a bathymetric survey near Breton Island, Louisiana (LA). During this study, multibeam bathymetry data were collected aboard the research vessel (R...
Coastal Single-beam Bathymetry Data Collected in 2022 From Breton Island, Louisiana Coastal Single-beam Bathymetry Data Collected in 2022 From Breton Island, Louisiana
As part of the restoration monitoring component of the Deepwater Horizon early restoration project, scientists from the U.S. Geological Survey St. Petersburg Coastal and Marine Science Center (USGS SPCMSC) conducted a single-beam and multibeam bathymetry survey around Breton Island, Louisiana (LA), from August 3-5, 2022, for Field Activity Number (FAN) 2022-328-FA. The purpose of data...
Code and data for 'Confirmation of a decline in the summer population of the monarch butterfly due to habitat loss' Code and data for 'Confirmation of a decline in the summer population of the monarch butterfly due to habitat loss'
This code describes graphical and analytical comparisons between monarch butterfly survey data collected during summer breeding, fall migration, and winter.
Code and data from Castro-Santos et al.: Sprinting performance and behavior of shortnose sturgeon Code and data from Castro-Santos et al.: Sprinting performance and behavior of shortnose sturgeon
This data release includes the raw data and code used in Castro-Santos et al. (2024): Sprinting performance and behavior of adult shortnose sturgeon (Acipenser brevirostrum). Notably, the code includes several processes used to differentiate among attempts, quantify attempt rate, distance traversed, and endurance of shortnose sturgeon ascending a telemetered flume. The code can be...
Code for long-term monitoring reveals management effects on Prairie Warbler colonization, local extinction, and detection in a Massachusetts Pine Barren Code for long-term monitoring reveals management effects on Prairie Warbler colonization, local extinction, and detection in a Massachusetts Pine Barren
This repository contains all of the scripts to reproduce the analyses, figures, and tables associated with the manuscript Gordon et al. in prep. There is 1 R script that does the following: (1) format the data, (2) explores the data, and (3) goes through the analyses for each objective.
Code for quantitative support for the benefits of proactive management for wildlife disease control Code for quantitative support for the benefits of proactive management for wildlife disease control
This software release contains the input data, R scripts, and Rmarkdown visualization scripts. This includes (i) aggregation code of expert elicited parameter estimates, (ii) simulation code using our develop dynamic multi-state occupancy model for no management, proactive management, and reactive management, (iii) code for probabilistic decision trees, and (iv) Rmarkdown scripts...
Code for the effect of myiasis on Eastern Box Turtle (Terrapene carolina carolina) body condition, movement, and habitat use at Camp Edwards Code for the effect of myiasis on Eastern Box Turtle (Terrapene carolina carolina) body condition, movement, and habitat use at Camp Edwards
This software release contains one R script that reproduces all of the statistical analysis with objectives to (2) determine if myiasis affects Eastern Box Turtle body condition, (3) determine if myiasis affects Eastern Box Turtle shell temperature, (4) determine if myiasis affects Eastern Box Turtle habitat use, and (5) determine if myiasis affected turtles move shorter distances than...
Code to fit spatially explicit capture-recapture models to trapping data for western deer mice (Peromyscus sonoriensis) at Point Reyes National Seashore Code to fit spatially explicit capture-recapture models to trapping data for western deer mice (Peromyscus sonoriensis) at Point Reyes National Seashore
This repository contains code to fit Spatially-Explicit Capture Recapture (SECR) Models to trapping data for Peromyscus sonoriensis (deer mice) at Point Reyes National Seashore and reproduce analyses in the following manuscript: Rose, J.P., Parsons, L.S., Kleeman, P.M., and Halstead, B.J. 2024. Effect of invasive plant removal on the density of Peromyscus sonoriensis (western deer mice)...
Code to Support Chinook Salmon Freshwater Habitat Potential Modeling and Mapping for the Yukon and Kuskokwim River Basins in Alaska Code to Support Chinook Salmon Freshwater Habitat Potential Modeling and Mapping for the Yukon and Kuskokwim River Basins in Alaska
Code to support the "Freshwater Habitat Potential for Chinook Salmon in the Yukon and Kuskokwim River Basins, Alaska" project dataset. These Python notebooks and scripts process synthetic stream networks and DEMs to create unique reach contributing areas (uRCAs) and uRCA valley bottoms (uRCA VBs). The Python notebooks are designed to be run within ESRI ArcPro software and utilize the...
Code, imagery, and annotations for training a deep learning model to detect wildlife in aerial imagery Code, imagery, and annotations for training a deep learning model to detect wildlife in aerial imagery
There are 3 child zip files included in this data release. 01_Codebase.zip contains a codebase for using deep learning to filter images based on the probability of any bird occurrence. It includes instructions and files necessary for training, validating, and testing a machine learning detection algorithm. 02_Imagery.zip contains imagery that were collected using a Partenavia P68 fixed...
Collection of Pesticides and Other Water Quality Analytical Data from Selected Hydrogeologic Regions of Pennsylvania (ver. 2.0, September 2025) Collection of Pesticides and Other Water Quality Analytical Data from Selected Hydrogeologic Regions of Pennsylvania (ver. 2.0, September 2025)
These datasets contain all publicly available analytical data collected by the U.S. Geological Survey (USGS) at each location sampled by the Pennsylvania Pesticides in Vulnerable Groundwaters program between 2021 and 2024. Additional analytical data will be appended following the conclusion of each sampling season, and all data is made publicly available in the on-line National Water...