Articles

We announce the U.S. Geological Survey (USGS) Rotating X-ray Computed Tomography (RXCT) Coral-Core Archive, a digital resource derived from ~400 coral reef cores curated at the USGS Pacific and St. Petersburg Coastal and Marine Science Centers. The archive de-livers calibrated 3-D image volumes that enable reproducible values of skeletal density, linear extension, and calcification from...

Antimicrobial resistance can be an indicator of anthropogenic contamination in surface waters and is a potential public health threat. Methodological standardization for characterization of antimicrobial resistance in the environment is lacking. Quantitative PCR (qPCR) is used for rapid assessment of antibiotic resistance genes (ARGs) from environmental sources, including surface water...

Naegleria fowleri is a thermophilic free-living amoeba (FLA) and the causative agent of primary amoebic meningoencephalitis, posing public health risks in warm freshwater environments. This multiyear, multiagency study surveyed 40 thermally impacted recreational waters across five western United States national parks and recreation areas–Yellowstone National Park, Grand Teton National...

Fragile geologic features (FGFs) can be used to estimate an upper bound to the strength of earthquake ground shaking in the past thousands to tens of thousands of years. FGFs could be especially useful in the eastern United States, where few active faults are available for paleoseismic studies and where low seismic attenuation means that an earthquake could damage FGFs at large distances...

Controlling invasive wildlife species relies on the ability to efficiently remove individuals from the invaded environment. Thus, maximizing capture potential is of high interest, particularly for species that are difficult to capture. For invasive species such as the Argentine black and white tegu lizard (Salvator merianae), increasing attraction to traps could increase the probability...

Alaska's glaciers are losing mass at the fastest rate of any region globally, significantly affecting both the volume and distribution of water across the landscape. Though glaciers in the Alaska region (as defined by glaciologists this includes both Alaska and portions of adjacent Canada) range from sea level to nearly 6200 m (20,320 ft), the majority of glacier area in the Alaska...

Flooding and channel change in the Taiya River Basin in recent decades have directly affected park infrastructure and cultural resources. The complexities of flooding and channel change are compounded by the changing sediment and flow regime from a changing climate and shrinking glaciers, which will continue to drive dynamic riverine change. Streamflow data and geomorphic interpretation...

The influence of permafrost thaw on aquatic ecosystems is complex. Carbon, nutrients, and metals in stream discharge result in changing stream color, chemistry, and temperature. These different processes create a mosaic of spatially and temporally dynamic disturbances across the landscape with complex effects on the ecology.

Viruses are the most abundant and diverse organisms on Earth, though only a small portion cause disease. Understanding viral diversity is key to understanding and predicting pathogen emergence and zoonotic spillover. Here, we use meta-transcriptomic sequencing to examine the viral communities in the ileum of 25 Northern Mockingbirds (Mimus polyglottos) from various locations across Texas...

Lakes are vital ecosystems in southwest Alaska, supporting Pacific salmon, wildlife, and people. In Katmai and Lake Clark National Parks and Preserves, lakes span diverse landscapes containing volcanic uplands, glacier-fed valleys, and tundra all of which combine to influence their temperature, water quality, and ability to support critical uses. As the regional climate shifts, our...

Barriers to allowing hunting of white-tailed deer (Odocoileus virginianus) on private land shape hunter recruitment, retention, and reactivation efficacy as well as the ability of wildlife management agencies to use hunting as a management tool. Understanding perceptions of these barriers is crucial in urbanizing landscapes where there are increased challenges to allowing hunting access...

Streams are good indicators of change and the health of watersheds. By monitoring stream chemical composition and the kinds of life they support, we can learn about how they are being stressed (by activities such as mining or climate change) or recovering from a stress (after restoration efforts). But Central Alaska watersheds and the natural stream conditions they produce are diverse...