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Fish and Aquatic Species Publications

Looking for publications related to fish and aquatic species? Browse the list below or use the search box to narrow the results.

Filter Total Items: 322

Behavioral responses of Pacific lamprey to alarm cues

Pacific lamprey (Entosphenus tridentatus), an anadromous ectoparasite, faces several challenges during adult migration to spawning grounds. Developing methods to address these challenges is critical to the success of ongoing conservation efforts. The challenges are diverse, and include anthropogenic alterations to the ecosystem resulting in loss of habitat, impassable barriers such as dams, climat
Authors
Laurie L. Porter, Michael C. Hayes, Aaron D. Jackson, Brian J. Burke, Mary L. Moser, R. Steven Wagner

Trends in Rainbow Trout recruitment, abundance, survival, and growth during a boom-and-bust cycle in a tailwater fishery

Data from a large-scale mark-recapture study was used in an open population model to determine the cause for long-term trends in growth and abundance of a Rainbow Trout Oncorhynchus mykiss population in the tailwater of Glen Canyon Dam, AZ. Reduced growth affected multiple life stages and processes causing negative feedbacks that regulated the abundance of the population, including: higher mortali
Authors
Josh Korman, Micheal D. Yard, Theodore A. Kennedy

Analytical validation of a reverse transcriptase droplet digital PCR (RT-ddPCR) for quantitative detection of infectious hematopoietic necrosis virus

Infectious hematopoietic necrosis virus (IHNV) is an important pathogen of salmonid fishes. A validated universal reverse transcriptase quantitative PCR (RT-qPCR) assay that can quantify levels of IHNV in fish tissues has been previously reported. In the present study, we adapted the published set of IHNV primers and probe for use in a reverse-transcriptase droplet digital PCR (RT-ddPCR) assay for
Authors
Peng Jia, Maureen K. Purcell, Guang Pan, Jinjin Wang, Shifu Kan, Yin Liu, Xiaocong Zheng, Xiujie SHi, Junqiang He, Li Yu, Qunyi Hua, Tikang Lu, Wensheng Lan, James Winton, Ningyi Jin, Hong Liu

Migratory behavior of adult sea lamprey and cumulative passage performance through four fishways

This article describes a study of PIT-tagged sea lamprey (Petromyzon marinus) ascending four fishways comprising three designs at two dams on the Connecticut River, USA. Migration between dams was rapid (median migration rate = 23 km·day−1). Movement through the fishways was much slower, however (median = 0.02–0.33 km·day−1). Overall delay at dams was substantial (median = 13.6–14.6 days); many fi
Authors
Theodore R. Castro-Santos, Xiaotao Shi, Alexander Haro

Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV)

Methods for a plaque neutralization test (PNT) were optimized for the detection and quantification of viral hemorrhagic septicemia virus (VHSV) neutralizing activity in the plasma of Pacific Herring Clupea pallasii. The PNT was complement dependent, as neutralizing activity was attenuated by heat inactivation; further, neutralizing activity was mostly restored by the addition of exogenous compleme
Authors
Lucas Hart, Ashley MacKenzie, Maureen K. Purcell, Rachel L. Thompson, Paul Hershberger

Pufferfish mortality associated with novel polar marine toxins in Hawaii

Fish die-offs are important signals in tropical marine ecosystems. In 2010, a mass mortality of pufferfish in Hawaii (USA) was dominated by Arothron hispidus showing aberrant neurological behaviors. Using pathology, toxinology, and field surveys, we implicated a series of novel, polar, marine toxins as a likely cause of this mass mortality. Our findings are striking in that (1) a marine toxin was
Authors
Thierry M. Work, Perer D. R. Moeller, Kevin R. Beauchesne, Julie Dagenais, Renee Breeden, Robert Rameyer, Willliam A. Walsh, Melanie Abecassis, Donald R. Kobayashi, Carla M. Conway, James Winton

Wind River Subbasin Restoration, annual report of U.S. Geological Survey activities: Parr monitoring and instream passive integrated transponder detection, January 1, 2015 – December 31, 2015

We used Passive Integrated Transponder (PIT)-tagging and a series of instream PIT-tag interrogation systems (PTIS) to investigate life-histories, populations, and efficacy of habitat restoration actions for steelhead Oncorhynchus mykiss in the Wind River subbasin, WA. Our tagging focused on parr in headwater areas of the subbasin and our PTISs provide information on movement of these parr, which i
Authors
Ian Jezorek, Patrick Connolly

Status and trends of dam removal research in the United States

Aging infrastructure coupled with growing interest in river restoration has driven a dramatic increase in the practice of dam removal. With this increase, there has been a proliferation of studies that assess the physical and ecological responses of rivers to these removals. As more dams are considered for removal, scientific information from these dam-removal studies will increasingly be called u
Authors
James Bellmore, Jeffrey J. Duda, Laura Craig, Samantha L. Greene, Christian E. Torgersen, Mathias J. Collins, Katherine Vittum

Effects of carbon dioxide on juveniles of the freshwater mussel (Lampsilis siliquoidea [Unionidae])

Carbon dioxide (CO2) has shown promise as a tool to control movements of invasive Asian carp, but its effects on native freshwater biota have not been well studied. The authors evaluated lethal and sublethal responses of juvenile fatmucket (Lampsilis siliquoidea) mussels to CO2 at levels (43–269 mg/L, mean concentration) that bracket concentrations effective for deterring carp movement. The 28-d l
Authors
Diane L. Waller, Michelle R. Bartsch, Kim T. Fredricks, Lynn A. Bartsch, Susan M. Schleis, Sheldon Lee

Electrical guidance efficiency of downstream-migrating juvenile Sea Lamprey decreases with increasing water velocity

We tested the efficacy of a vertically oriented field of pulsed direct current (VEPDC) created by an array of vertical electrodes for guiding downstream-moving juvenile Sea Lampreys Petromyzon marinus to a bypass channel in an artificial flume at water velocities of 10–50 cm/s. Sea Lampreys were more likely to be captured in the bypass channel than in other sections of the flume regardless of elec
Authors
Scott M. Miehls, Nicholas S. Johnson, Alexander Haro

Long-term fish monitoring in large rivers: Utility of “benchmarking” across basins

In business, benchmarking is a widely used practice of comparing your own business processes to those of other comparable companies and incorporating identified best practices to improve performance. Biologists and resource managers designing and conducting monitoring programs for fish in large river systems tend to focus on single river basins or segments of large rivers, missing opportunities to
Authors
David L. Ward, Andrew F. Casper, Timothy D. Counihan, Jennifer M. Bayer, Ian R. Waite, John J. Kosovich, Colin Chapman, Elise R. Irwin, Jennifer S. Sauer, Brian Ickes, Alexa McKerrow

Molecular characterization of a novel orthomyxovirus from rainbow and steelhead trout (Oncorhynchus mykiss)

A novel virus, rainbow trout orthomyxovirus (RbtOV), was isolated in 1997 and again in 2000 from commercially-reared rainbow trout (Oncorhynchus mykiss) in Idaho, USA. The virus grew optimally in the CHSE-214 cell line at 15°C producing a diffuse cytopathic effect; however, juvenile rainbow trout exposed to cell culture-grown virus showed no mortality or gross pathology. Electron microscopy of pre
Authors
William N. Batts, Scott E. LaPatra, Ryan Katona, Eric Leis, Terry Fei Fan Ng, Marine S.O. Bruieuc, Rachel Breyta, Maureen K. Purcell, Thomas B. Waltzek, Eric Delwart, James Winton