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Publications

Publications from USGS science centers throughout the Southeast Region.

Filter Total Items: 10361

Functional gene composition and metabolic potential of deep-sea coral-associated microbial communities Functional gene composition and metabolic potential of deep-sea coral-associated microbial communities

Over the past decade, an abundance of 16S rRNA gene surveys have provided microbiologists with data regarding the prokaryotes present in a coral-associated microbial community. Functional gene studies that provide information regarding what those microbes might do are fewer, particularly for non-tropical corals. Using the GeoChip 5.0S microarray, we present a functional gene study of...
Authors
Zoe A. Pratte, Frank J. Stewart, Christina A. Kellogg

Salinization and sedimentation drive contrasting assembly mechanisms of planktonic and sediment-bound bacterial communities in agricultural streams Salinization and sedimentation drive contrasting assembly mechanisms of planktonic and sediment-bound bacterial communities in agricultural streams

Agriculture is the most dominant land use globally and is projected to increase in the future to support a growing human population but also threatens ecosystem structure and services. Bacteria mediate numerous biogeochemical pathways within ecosystems. Therefore, identifying linkages between stressors associated with agricultural land use and responses of bacterial diversity is an...
Authors
Stephen E. DeVilbiss, Jason M. Taylor, Matthew B. Hicks

Analysis of high-resolution single channel seismic data for use in sediment resource evaluation, eastern Texas and western Louisiana Continental Shelf, Gulf of Mexico Analysis of high-resolution single channel seismic data for use in sediment resource evaluation, eastern Texas and western Louisiana Continental Shelf, Gulf of Mexico

Shallow subsurface geologic data recorded as high-resolution seismic profiles are used to interpret the geology of coastal and marine systems. These data were originally recorded on paper rolls that are stored in geophysical archives. Data collection has since converted to entirely digital formats, yet the analog data are still useful for geologic interpretation. This report describes...
Authors
James G. Flocks, Arnell S. Forde, Stephen T. Bosse

Boreal conifers maintain carbon uptake with warming despite failure to track optimal temperatures Boreal conifers maintain carbon uptake with warming despite failure to track optimal temperatures

Warming shifts the thermal optimum of net photosynthesis (ToptA) to higher temperatures. However, our knowledge of this shift is mainly derived from seedlings grown in greenhouses under ambient atmospheric carbon dioxide (CO2) conditions. It is unclear whether shifts in ToptA of field-grown trees will keep pace with the temperatures predicted for the 21st century under elevated...
Authors
Mirindi E. Dusenge, Jeffery M. Warren, Peter B. Reich, Eric Ward, Bridget K. Murphy, Artur Stefanski, Raimundo Bermudez, Marisol Cruz, David A. McLennan, Anthony W. King, Rebecca A. Montgomery, Paul J. Hanson, Danielle A. Way

Evidence of population-level impacts and resiliency for Gulf of Mexico shelf taxa following the Deepwater Horizon oil spill Evidence of population-level impacts and resiliency for Gulf of Mexico shelf taxa following the Deepwater Horizon oil spill

The goal of this paper was to review the evidence of population-level impacts of the Deepwater Horizon Oil Spill (DWH) on Gulf of Mexico (GOM) continental shelf taxa, as well as evidence of resiliency following the DWH. There is considerable environmental and biological evidence that GOM shelf taxa were exposed to and suffered direct and indirect impacts of the DWH. Numerous assessments...
Authors
W.F. Patterson, K.L. Robinson, B.K. Barnett, M. Campbell, D.C. Chagaris, J. P. Chanton, K. Daly, D. Hanisko, F. Hernandez, S.A. Murawski, A.G. Pollock, D. Portnoy, Erin L. Pulster

Evaluation of alternative groundwater-withdrawal scenarios on water levels in Kingsbury Pond, upper Charles River Basin, eastern Massachusetts Evaluation of alternative groundwater-withdrawal scenarios on water levels in Kingsbury Pond, upper Charles River Basin, eastern Massachusetts

Kingsbury Pond is a glacial kettle pond in the town of Norfolk, Massachusetts, in the Mill River Basin, which is part of the Upper Charles River Basin in eastern Massachusetts. The pond is hydraulically connected to the surrounding groundwater-flow system, and water levels in the pond fluctuate in response to recharge to the aquifer from precipitation and wastewater return flows through...
Authors
Paul M. Barlow, Paul J. Friesz, Jeffrey R. Barbaro

Tidal restriction likely has greater impact on the carbon sink of coastal wetland than climate warming and invasive plant Tidal restriction likely has greater impact on the carbon sink of coastal wetland than climate warming and invasive plant

Aims Coastal salt marshes are productive ecosystems that are highly efficient carbon sinks, but there is uncertainty regarding the interactions among climate warming, plant species, and tidal restriction on C cycling.Methods Open-top chambers (OTCs) were deployed at two coastal wetlands in Yancheng, China, where native Phragmites australis (Phragmites) and invasive Spartina alterniflora...
Authors
Pan Zhou, Siyuan Ye, Liujuan Xie, Ken Krauss, Lixin Pei, Samantha K. Chapman, Hans Brix, Edward A. Laws, Hongming Yuan, Shixiong Yang, Xigui Ding, Shucheng Xie

Satellite tracking reveals use of Biscayne National Park by sea turtles tagged in multiple locations Satellite tracking reveals use of Biscayne National Park by sea turtles tagged in multiple locations

Although historical observations date back to the 1800’s, there is little information on sea turtle occupancy within Biscayne National Park (BNP). The park is located along the Florida reef tract and is dominated by the Gulfstream, which acts as a corridor for many marine animals. Here we used satellite telemetry to determine areas of use in BNP for two species of imperiled sea turtles...
Authors
Kristen Hart, Allison Benscoter, Haley M. Turner, Michael Cherkiss, Andrew Crowder, Jacquelyn C. Guzy, David Roche, Christopher R. Sasso, Glenn D. Goodwin, Derek A. Burkholder

Estuarine salinity extremes: Using the Coastal Salinity Index to quantify the role of droughts, floods, hurricanes, and freshwater flow alteration Estuarine salinity extremes: Using the Coastal Salinity Index to quantify the role of droughts, floods, hurricanes, and freshwater flow alteration

In the face of accelerating climate change, advancing understanding of how extreme climatic events influence estuarine salinities can help to inform resource management. Extreme salinities driven by droughts, hurricanes, floods, and freshwater flow alterations can lead to ecological transformations in estuarine ecosystems. Here, we applied the Coastal Salinity Index (CSI; Conrads and...
Authors
Laura Feher, Michael Osland, Christopher Swarzenski

Incorporating metapopulation dynamics to inform invasive species management: Evaluating bighead and silver carp control strategies in the Illinois River Incorporating metapopulation dynamics to inform invasive species management: Evaluating bighead and silver carp control strategies in the Illinois River

1. Invasive species management can benefit from predictive models that incorporate spatially explicit demographics and dispersal to guide resource allocation decisions. 2. We used invasive bigheaded carps (Hypophthalmichthys spp.) in the Illinois River, USA as a case study to create a spatially explicit model to evaluate the allocation of future management efforts. Specifically, we...
Authors
Jahn Kallis, Richard A. Erickson, David P. Coulter, Alison A. Coulter, Marybeth K. Brey, Matt Catalano, John M. Dettmers, James E. Garvey, Kevin Irons, Elizabeth A. Marschall, Kenneth A Rose, Mark L. Wildhaber, David C. Glover

Hydrogeologic framework of southwestern Louisiana Hydrogeologic framework of southwestern Louisiana

A hydrogeologic framework was constructed for the Coastal Lowlands aquifer system in southwestern Louisiana. Data from previous hydrogeologic and geologic studies were synthesized and expanded using 2,242 geophysical logs to map 4 hydrogeologic units: the Chicot aquifer system, Evangeline aquifer, Jasper aquifer system, and Catahoula aquifer. Raster surfaces were created for the base and...
Authors
Maxwell A. Lindaman

Performance evaluation of a channel rehabilitation project on the Lower Missouri River and implications for the dispersal of larval pallid sturgeon Performance evaluation of a channel rehabilitation project on the Lower Missouri River and implications for the dispersal of larval pallid sturgeon

In the Lower Missouri River, extensive channel modifications have altered hydraulic and morphologic conditions and reduced the river's ecological integrity. One species that has been adversely affected by these changes is the pallid sturgeon (Scaphirhynchus albus). Mainstem dams on the Missouri River restrict the upstream migration of adults and limit the downstream dispersal of larvae
Authors
Brandon James Sansom, Bruce Call, Carl J. Legleiter, R. B. Jacobson
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