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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 43179

Why were California's wine country fires so destructive? Why were California's wine country fires so destructive?

As of late October more than a dozen wildfires north of San Francisco had killed more than 40 people, burned approximately 160,000 acres and destroyed more than 7,000 structures. This tragic loss of life and property is unprecedented in California. However, the fires are not anomalous events in terms of their size, intensity or the speed with which they spread. Indeed, the path of the...
Authors
Jon E. Keeley

Pharmaceuticals in water, fish and osprey nestlings in Delaware River and Bay Pharmaceuticals in water, fish and osprey nestlings in Delaware River and Bay

Exposure of wildlife to Active Pharmaceutical Ingredients (APIs) is likely to occur but studies of risk are limited. One exposure pathway that has received attention is trophic transfer of APIs in a water-fish-osprey food chain. Samples of water, fish plasma and osprey plasma were collected from Delaware River and Bay, and analyzed for 21 APIs. Only 2 of 21 analytes exceeded method...
Authors
Thomas G. Bean, Barnett A. Rattner, Rebecca S. Lazarus, Daniel D. Day, S. Rebekah Burket, Bryan W. Brooks, Samuel P. Haddad, William W. Bowerman

Population trends, survival, and sampling methodologies for a population of Rana draytonii Population trends, survival, and sampling methodologies for a population of Rana draytonii

Estimating population trends provides valuable information for resource managers, but monitoring programs face trade-offs between the quality and quantity of information gained and the number of sites surveyed. We compared the effectiveness of monitoring techniques for estimating population trends of Rana draytonii (California Red-legged Frog) at Point Reyes National Seashore, California...
Authors
Gary M. Fellers, Patrick M. Kleeman, David A.W. Miller, Brian J. Halstead

Riparian bird density decline in response to biocontrol of Tamarix from riparian ecosystems along the Dolores River in SW Colorado, USA Riparian bird density decline in response to biocontrol of Tamarix from riparian ecosystems along the Dolores River in SW Colorado, USA

Biocontrol of invasive tamarisk (Tamarix spp.) in the arid Southwest using the introduced tamarisk beetle (Diorhabda elongata) has been hypothesized to negatively affect some breeding bird species, but no studies to date have documented the effects of beetle-induced defoliation on riparian bird abundance. We assessed the effects of tamarisk defoliation by monitoring defoliation rates...
Authors
Abigail J. Darrah, Charles van Riper

Variation in annual clutch phenology of desert tortoises (Gopherus morafkai) in the Sonoran Desert of Arizona Variation in annual clutch phenology of desert tortoises (Gopherus morafkai) in the Sonoran Desert of Arizona

The phenology of egg production and oviposition in organisms affects survival and development of neonates and thus, both offspring and maternal fitness. In addition, in organisms with environmental sex determination, clutch phenology can affect hatchling sex ratios with attendant effects on population demography. The rapid rate of contemporary climate change might disrupt reproductive...
Authors
Jeffrey E. Lovich, Roy C. Averill-Murray, Mickey Agha, Joshua R. Ennen, Meaghan Austin

Patterns and correlates of giant sequoia foliage dieback during California’s 2012–2016 hotter drought Patterns and correlates of giant sequoia foliage dieback during California’s 2012–2016 hotter drought

Hotter droughts – droughts in which unusually high temperatures exacerbate the effects of low precipitation – are expected to increase in frequency and severity in coming decades, challenging scientists and managers to identify which parts of forested landscapes may be most vulnerable. In 2014, in the middle of California’s historically unprecedented 2012–2016 hotter drought, we noticed...
Authors
Nathan L. Stephenson, Adrian J. Das, Nicholas J. Ampersee, Kathleen G. Cahill, Anthony C. Caprio, John E. Sanders, A. Park Williams

Inland fisheries – Invisible but integral to the UN Sustainable Development Agenda for ending poverty by 2030 Inland fisheries – Invisible but integral to the UN Sustainable Development Agenda for ending poverty by 2030

The United Nations’ (UN) 2030 Agenda for Sustainable Development defines the formidable challenge of integrating historically separate economic, social, and environmental goals into a unified ‘plan of action for people, planet, and prosperity.’ We highlight the substantial contribution inland fisheries can make towards preventing increased poverty and, in some cases, alleviating poverty...
Authors
Abigail J. Lynch, I.G. Cowx, Etienne Fluet-Chouinard, S. M. Glaser, Sui C. Phang, T. Douglas Beard, S. D. Bower, J.L. Brooks, David B. Bunnell, Julie Claussen, S. J. Cooke, Yu-Chun Kao, Kai Lorenzen, Bonnie Myers, Andrea J. Reid, J. J. Taylor, S. Youn

Monogenea of fishes from the lagoon flats of Palmyra Atoll in the Central Pacific Monogenea of fishes from the lagoon flats of Palmyra Atoll in the Central Pacific

A survey of the monogeneans of fishes from the lagoon flats of Palmyra Atoll detected 16 species already reported from the Indo-West Pacific faunal region. A total of 653 individual fish from 44 species were collected from the sand flats bordering the lagoon of the atoll. Eighteen species of fish were infected with monogeneans. The monogenean species recovered were: Benedenia hawaiiensis...
Authors
Victor Manuel Vidal-Martinez, Lilia Catherinne Soler-Jimenez, Ma. Leopoldina Aguirre-Macedo, John Mclaughlin, Alejandra G. Jaramillo, Jenny C. Shaw, Anna James, Ryan F. Hechinger, Armand M. Kuris, Kevin D. Lafferty

Mangrove ecosystems under climate change Mangrove ecosystems under climate change

This chapter assesses the response of mangrove ecosystems to possible outcomes of climate change, with regard to the following categories: (i) distribution, diversity, and community composition, (ii) physiology of flora and fauna, (iii) water budget, (iv) productivity and remineralization, (v) carbon storage in biomass and sediments, and (vi) the filter function for elements beneficial...
Authors
T.C. Jennerjahn, E. Gilman, Ken W. Krauss, L.D. Lacerda, I. Nordhaus, E. Wolanski

Development of a dual luciferase activity and fluorescamine protein assay adapted to a 384 micro-well plate format: Reducing variability in human luciferase transactivation cell lines aimed at endocrine active substances Development of a dual luciferase activity and fluorescamine protein assay adapted to a 384 micro-well plate format: Reducing variability in human luciferase transactivation cell lines aimed at endocrine active substances

There is a need to adapt cell bioassays to 384-well and 1536-well formats instead of the traditional 96-well format as high-throughput screening (HTS) demands increase. However, the sensitivity and performance of the bioassay must be re-verified in these higher micro-well plates, and verification of cell health must also be HT (high-throughput). We have adapted two commonly used human...
Authors
Jennifer Brennan, Donald E. Tillitt

Evaluating trade-offs in bull trout reintroduction strategies using structured decision making Evaluating trade-offs in bull trout reintroduction strategies using structured decision making

Structured decision making allows reintroduction decisions to be made despite uncertainty by linking reintroduction goals with alternative management actions through predictive models of ecological processes. We developed a decision model to evaluate the trade-offs between six bull trout (Salvelinus confluentus) reintroduction decisions with the goal of maximizing the number of adults in...
Authors
William R. Brignon, James T. Peterson, Jason B. Dunham, Howard A. Schaller, Carl B. Schreck

Free-ranging domestic cats (Felis catus) on public lands: estimating density, activity, and diet in the Florida Keys Free-ranging domestic cats (Felis catus) on public lands: estimating density, activity, and diet in the Florida Keys

Feral and free-ranging domestic cats (Felis catus) can have strong negative effects on small mammals and birds, particularly in island ecosystems. We deployed camera traps to study free-ranging cats in national wildlife refuges and state parks on Big Pine Key and Key Largo in the Florida Keys, USA, and used spatial capture–recapture models to estimate cat abundance, movement, and...
Authors
Michael V. Cove, Beth Gardner, Theodore R. Simons, Roland Kays, Allan F. O’Connell
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