Publications
Below is a list of available NOROCK peer reviewed and published science. If you are in search of a specific publication and cannot find it below or through a search, please contact twojtowicz@usgs.gov.
Filter Total Items: 1334
Leveraging an observed-data likelihood improves the use of machine learning labels in a Bayesian hierarchical model for bioacoustic data Leveraging an observed-data likelihood improves the use of machine learning labels in a Bayesian hierarchical model for bioacoustic data
Classification of massive datasets by machine learning (ML) algorithms is promising for many scientific domains, especially wildlife monitoring programs that rely on passive acoustic surveys for detecting species. However, treating ML-predicted class labels (e.g., species identity) as truth biases inferences of focal parameters within common modeling frameworks. One solution is to model...
Authors
Jacob Oram, Katharine M. Banner, Christian Stratton, Andrew Hoegh, Kathryn Irvine
Groundwater structures fish growth and production across a riverscape Groundwater structures fish growth and production across a riverscape
Landscapes are composed of habitat patches and conditions that vary across space and time. While habitat variability and complexity can support important ecological processes and ecosystem services, the dynamic nature of habitats can also constrain organismal growth and production as optimal conditions are fleeting. In riverine ecosystems, groundwater discharge to streams stabilises...
Authors
Jeffrey R. Baldock, Robert Al-Chokhachy, Annika W. Walters
When do single-species occupancy models outperform multispecies models? When do single-species occupancy models outperform multispecies models?
Occupancy models have become increasingly popular for species monitoring and assessment, in part, because detection/non-detection data are readily obtained using a variety of methods. Multispecies occupancy models (MSOMs) can yield more accurate parameter estimates than single-species models (SSOMs) with less data through their hierarchical structure, making MSOMs an attractive option...
Authors
Gavin G. Cotterill, Douglas A. Keinath, Tabitha A. Graves
Bioclimatic, demographic, and anthropogenic correlates of grizzly bear activity patterns in the Greater Yellowstone Ecosystem Bioclimatic, demographic, and anthropogenic correlates of grizzly bear activity patterns in the Greater Yellowstone Ecosystem
Plasticity of diel activity rhythms may be a key element for adaptations of wildlife populations to changing environmental conditions. In the last decades, grizzly bears Ursus arctos in the Greater Yellowstone Ecosystem (GYE) have experienced notable environmental fluctuations, including changes in availability of food sources and severe droughts. Although substantial research has been...
Authors
A. Donatelli, Mark Haroldson, Justin G. Clapp, P. Ciucci, Frank T. van Manen
Aridity reduces lag times between aquatic and terrestrial dry-down among watersheds and across years in the northwest US Aridity reduces lag times between aquatic and terrestrial dry-down among watersheds and across years in the northwest US
Landscapes encompass both aquatic and terrestrial ecosystems that experience the same climate but may respond to climate in divergent ways. For example, the time lag between seasonal dry-down of terrestrial soil moisture and decline in streamflow has important implications for species and ecosystem processes across the aquatic–terrestrial interface. How these lags between aquatic and...
Authors
Bradley J. Butterfield, Daniel Rodolphe Schlaepfer, Robert Al-Chokhachy, Jason Dunham, Jeremiah D. Groom, Clint C. Muhlfeld, Christian E. Torgersen, John B. Bradford
Missing data in ecology: Syntheses, clarifications, and considerations Missing data in ecology: Syntheses, clarifications, and considerations
In ecology and related sciences, missing data are common and occur in a variety of different contexts. When missing data are not handled properly, subsequent statistical estimates tend to be biased, inefficient, and lack proper confidence interval coverage. Missing data are often grouped into three categories: missing completely at random (MCAR), missing at random (MAR), and missing not...
Authors
Michael Dumelle, Rob Trangucci, Amanda M. Nahlik, Anthony R Olsen, Kathryn Irvine, Karen A. Blocksom, Jay Ver Hoef, Claudio Fuentes
Expression and mechanisms of behavioral plasticity in large mammals Expression and mechanisms of behavioral plasticity in large mammals
Behavioral plasticity, the alteration of behavior in response to stimuli, is becoming increasingly important in the context of human-induced rapid environmental change. Theoretical and empirical studies suggest that the expression and magnitude of behavioral plasticity are likely facilitated or constrained primarily by two factors: environmental variation and endogenous traits such as...
Authors
Rebecca R. Thomas-Kuzilik, Justine A. Becker, Jeffrey L. Beck, Justin G. Clapp, Alyson B. Courtemanch, Gary L. Fralick, Chris Geremia, L. Embere Hall, Matthew J. Kauffman, Blake Lowrey, Matthew C. Metz, Hollie M. Miyasaki, Kevin L. Monteith, Anna C. Ortega, Hall Sawyer, Douglas W. Smith, Erin E. Stahler, Daniel R. Stahler, Tana L. Verzuh, Jerod A. Merkle
Challenges and opportunities in mitigating sarcoptic mange in wild South American camelids Challenges and opportunities in mitigating sarcoptic mange in wild South American camelids
Vicuñas (Vicugna vicugna) and guanacos (Lama guanicoe) are the two species of wild South American camelids whose distributions range from Peru to northern Argentina and southern Peru to southern Argentina, respectively. Listed as critically endangered in the 1960s due to poaching, vicuña numbers had been gradually recovering; however, new concerns about population stability have arisen...
Authors
Alynn Martin, Emiliana Isasi-Catalá, Marilia Salgado-Caxito, Ana Gallegos, Leonardo Hostos-Olivera, Paulo Colchao-Claux, Steven J. Smith, Fabian Beltran-Saavedra, Catherine Dougnac, Camila Germana, Mariana Montoya, Scott Carver, Paul C. Cross, Chris Walzer
Exploring the exploitation of migratory moths by radio-marked grizzly bears in Wyoming Exploring the exploitation of migratory moths by radio-marked grizzly bears in Wyoming
Grizzly bear (Ursus arctos) feeding on migratory army cutworm moths (Euxoa auxiliaris) was first documented by the Interagency Grizzly Bear Study Team (IGBST) during the early 1980s in the southeastern portion of the Greater Yellowstone Ecosystem (GYE). Since those initial observations, use of this seasonally available food resource by grizzly bears has grown substantially. As of 2023...
Authors
Justin Clapp, Mark Haroldson, Justin A. Dellinger, Daniel D. Bjornlie, Daniel J. Thomposon, Frank T. van Manen
Non-native prey availability and over-compensatory density dependence drive population dynamics of a native fish predator Non-native prey availability and over-compensatory density dependence drive population dynamics of a native fish predator
Understanding the factors that regulate population dynamics is crucial for conserving imperiled species. Bull trout (Salvelinus confluentus), a piscivorous salmonid and one of North America's most threatened cold-water species, has declined significantly due to habitat loss, overfishing, invasive species, and climate change. While recovery efforts have primarily targeted these threats...
Authors
Madaline Cochrane, Timothy Cline, Travis S. Schmidt, James Dunnigan, Will Warnock, Clint C. Muhlfeld
Potential risks of vegetation treatments to introduce and increase invasive annual grasses in rangelands of Montana, North Dakota, and South Dakota—A science synthesis to inform National Environmental Policy Act analyses Potential risks of vegetation treatments to introduce and increase invasive annual grasses in rangelands of Montana, North Dakota, and South Dakota—A science synthesis to inform National Environmental Policy Act analyses
The U.S. Geological Survey is working with Federal land management agencies to develop a series of planned structured science syntheses to support environmental effects analyses that agencies conduct under the National Environmental Policy Act (NEPA). This report synthesizes science information relevant to environmental effects analyses concerned with potential increases in the...
Authors
Aaron N. Johnston, David J. A. Wood, Kyle Ebenhoch, Tait K. Rutherford, Logan M. Maxwell, Sarah K. Carter
Impacts of lake elevation decline on spawning habitat of a critical, native forage species Impacts of lake elevation decline on spawning habitat of a critical, native forage species
Objective Lake elevation decline is a global phenomenon with pronounced effects in arid regions that changes the characteristics of nearshore habitat area available to lacustrine spawners, potentially impacting recruitment and whole-lake food web dynamics. Our objective was to understand the potential effects of lake elevation decline on spawning habitat for the Tui Chub Siphateles...
Authors
Sarah Barnes, Robert Al-Chokhachy, Phaedra E. Budy