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Publications

Browse more than 150,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Upper Midwest Environmental Sciences Center Publications

Filter Total Items: 3311

Effects of river floods and sedimentation on a naturally dynamic Great Lakes estuary Effects of river floods and sedimentation on a naturally dynamic Great Lakes estuary

Some of the most biologically diverse coastal wetlands and estuaries are found along the Great Lakes, but the spatial extent and timing of river-related inundation and sedimentation vary greatly among natural and altered systems. We used hydrologic data, geomorphic change detection, and satellite imagery to study inundation and sedimentation patterns in the naturally dynamic estuary of...
Authors
Faith Fitzpatrick, Angus Vaughan, Eric D. Dantoin, Shelby P. Sterner, Paul Reneau, Collin Roland

A case for assemblage-level conservation to address the biodiversity crisis A case for assemblage-level conservation to address the biodiversity crisis

Traditional conservation efforts have centred on safeguarding individual species, but these strategies have limitations in a world where entire ecosystems are rapidly changing. Ecosystem conservation can maintain critical ecological functions, but often lacks the detail necessary for the effective conservation of threatened or endangered species. The conservation of such species is...
Authors
Michael W. Belitz, C.J. Campbell, Ryan G. Drum, Wendy Leuenberger, Toni Lyn Morelli, Kelly Nail, Vaughn Shirey, Wayne E. Thogmartin, Elise F. Zipken

Sampling mass mortality events to enable diagnoses: A protocol using freshwater mussels Sampling mass mortality events to enable diagnoses: A protocol using freshwater mussels

Many taxa around the globe are threatened by often unexplained mass mortality events (MMEs), which can decimate populations and compromise key ecosystem functions. One example of a highly threatened taxon facing frequent MMEs is freshwater mussels (Unionida).There has been a recent increase in interest in understanding the causes of freshwater mussel MMEs, but standardised methodologies...
Authors
Daniel A. Cossey, Michelle Dennis, Jordan C. Richard, Camilla D. Torre, Andrew McElwain, Diane L. Waller, Susan Knowles, Joshua I. Brian, Eric Leis, Ericka A. Burioli, David C. Aldridge

Prioritizing chemicals of emerging concern in the Great Lakes Basin using covariance of chemical concentrations and diverse biological responses from a variety of species Prioritizing chemicals of emerging concern in the Great Lakes Basin using covariance of chemical concentrations and diverse biological responses from a variety of species

The Great Lakes Restoration Initiative aims to protect and restore the nation’s largest freshwater resource, in part, by furthering our understanding of the effects of contaminants of emerging concern (CECs) and chemical mixtures on aquatic and terrestrial organisms. To address this goal, an interagency team conducted field studies at sites along the Maumee River in Ohio, USA, in 2016...
Authors
Kelsey Vitense, Luke C. Loken, Erin C Maloney, Brett R. Blackwell, Timothy W. Collette, Steven R. Corsi, Christine M. Custer, Erik Davenport, Satomi Kohno, Stephanie E. Hummel

Fish-assemblage evaluation in the lower Sandusky River, Ohio, following dam removal Fish-assemblage evaluation in the lower Sandusky River, Ohio, following dam removal

The Sandusky River, Ohio, USA, has experienced more than a century of alterations, including dam implementation and removal, causing a cascade of habitat changes. The physical changes in the river led to establishment of several invasive species. Ten hoop-net sampling sites, spaced about 500 m apart were established in the river to monitor fish assemblage and their habitat preferences...
Authors
Kailee Amanda Schulz, Matthew Ross Acre, Andrew T. Mueller, James J. Wamboldt, Dustin Broaddus, Tyler Hessler, Tammy Michelle Wilson, Robert L. Mapes, Jon Amberg, Robin D. Calfee

Using bioavailability modeling to refine copper treatments for zebra mussel control and better understanding risks to non-target species Using bioavailability modeling to refine copper treatments for zebra mussel control and better understanding risks to non-target species

Copper can be toxic to aquatic organisms at high concentrations and has been previously used successfully to control zebra mussels (Dreissena polymorpha). Because copper’s toxicity changes with water chemistry, using the same copper concentration in different waterbodies could yield different outcomes. We demonstrate how measuring water chemistry parameters and using the Biotic Ligand...
Authors
Angelique D. Dahlberg, Diane L. Waller, Todd J. Severson, Matthew T. Barbour, Matthew Meulemans, Jeremy K. Wise, Alex W. Bajcz, Mark Jankowski, Nicholas B.D. Phelps

The MIEM guidelines: Minimum information for reporting of environmental metabarcoding data The MIEM guidelines: Minimum information for reporting of environmental metabarcoding data

Environmental DNA (eDNA) and RNA (eRNA) metabarcoding has become a popular tool for assessing biodiversity from environmental samples, but inconsistent documentation of methods, data and metadata makes results difficult to reproduce and synthesise. A working group of scientists have collaborated to produce a set of minimum reporting guidelines for the constituent steps of metabarcoding...
Authors
Katy E. Klymus, Jacoby D. Baker, Cathryn L. Abbott, Rachel J. Brown, Joseph M. Craine, Zachary Gold, Margaret Hunter, Mark D. Johnson, Devin Nicole Jones-Slobodian, Michelle J. Jungbluth, Sean P. Jungbluth, Yer Lor, Aaron P. Maloy, Christopher M. Merkes, Rachel T. Noble, Nastassia V. Patin, Adam Sepulveda, Stephen Frank Spear, Joshua A. Steele, Miwa Takahashi, Alison W. Watts, Susanna Theroux

Spatial differences in predicted Phalaris arundinacea (reed canarygrass) occurrence in floodplain forest understories Spatial differences in predicted Phalaris arundinacea (reed canarygrass) occurrence in floodplain forest understories

Reed canarygrass (Phalaris arundinacea L.) is one of the most common invaders of floodplains and wetlands in North America. In the Upper Mississippi River floodplain, invasion by reed canarygrass in forest understories can inhibit forest regeneration when gaps form in the overstory. Understanding the distribution of reed canarygrass in forest understories is essential for effective...
Authors
John T. Delaney, Molly Van Appledorn, Nathan R. De Jager, Kristen L. Bouska, Jason J. Rohweder

Macro- and micronutrient effects on phytoplankton in Green Bay, Lake Michigan and the western basin of Lake Erie Macro- and micronutrient effects on phytoplankton in Green Bay, Lake Michigan and the western basin of Lake Erie

Efforts to reduce the frequency, extent, and toxicity of harmful algal blooms (HABs) require knowledge about drivers of algal growth, toxin production, and shifts in phytoplankton community composition to cyanobacterial dominance. Although labile nitrogen (N) and phosphorus (P) fuel primary production, micronutrients also play roles as the enzymatic engines that facilitate rapid and...
Authors
Jordyn T. Stoll, James H. Larson, Sean Bailey, Christopher Blackwood, David M. Costello

Evaluation of a carbon dioxide fish barrier through numerical modelling Evaluation of a carbon dioxide fish barrier through numerical modelling

The Chicago Area Waterway System (CAWS) is a potential route for the migration of aquatic invasive species from the Mississippi River Basin into the Great Lakes. Electric dispersal barriers were installed in the Chicago Sanitary Ship Canal, within CAWS, to prevent invasive fish from reaching the Great Lakes. Despite the high efficiency of these barriers, occasional maintenance events...
Authors
Marcela Politano, Aaron R. Cupp, David Smith, Avery Schemmel, P. Ryan Jackson, Jeff Zuercher

Determination of antimycin–a in a liquid formulation by high performance liquid chromatography–mass spectrometry Determination of antimycin–a in a liquid formulation by high performance liquid chromatography–mass spectrometry

Pesticide formulations containing the active ingredient antimycin–a (ANT–A) have been used by fisheries and aquaculture managers for several decades to remove nuisance fish species. Analytical methods for measuring ANT–A during pesticide treatments have been done using high performance liquid chromatography (HPLC) paired with multiple detection methods (for example, electrochemical...
Authors
Gavin N. Saari, J. Nolan Steiner, Bryan Lada, Nadia Carmosini

Silver carp experience metabolic and behavioral changes when exposed to water from the Chicago Area Waterway Silver carp experience metabolic and behavioral changes when exposed to water from the Chicago Area Waterway

One of the hallmarks of invasive species is their propensity to spread. Removing an invasive species after establishment is virtually impossible, and so considerable effort is invested in preventing the range expansion of invaders. Silver carp (Hypophthalmichthys molitrix) were discovered in the Mississippi River in 1981 and have spread throughout the basin. Despite their propensity to...
Authors
Amy E. Schneider, Andrew J. Esbaugh, Aaron R. Cupp, C. D. Suski
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