Western Ecological Research Center
Data and Tools
Below, you can find our stand alone data releases. For contemporary articles and their associated data, please visit our publications tab. We include tools that were developed to streamline analysis using different mediums. For further information, please contact authors.
Climate Distance Mapper
Climate Distance Mapper is a spatial decision-support tool designed to help land managers match seed sources with restoration sites. Plant populations are commonly adapted to local climate gradients and frequently exhibit a home-site advantage.
web applicationAnnual California sea otter stranding data
The California Sea Otter Stranding Network is part of the USGS effort to monitor southern sea otters (Enhydra lutris nereis) and provide data to the U.S. Fish and Wildlife Service.
Data
Spatial Predictions of Mojave Desert Tortoise, Sonoran Desert Tortoise and Pooled Species Habitat Suitability for present-day (1950 – 2000 yr)
This dataset provides spatial predictions of habitat suitability for Gopherus agassizii (Agassiz’s desert tortoise), Gopherus morafkai (Morafka’s desert tortoise) and a pooled-species model under current conditions (1950 – 2000 yr). The raster layers contained here accompany the manuscript Inman et al. 2019 and were used to evaluate subtle ecological niche...
Local Species-Environment Relationships
This dataset provides spatial predictions of clustering and the genotype association index for the Mojave genotype in local species-environment relationships of Desert Tortoises (Gopherus agassizi and Gopherus morafkaii) for individuals in the subregion encompassing the genetic sampling locations used by Edwards et al. (2015). This region offered an opportunity to explore habitat selection...
Local Species-Environment Relationships
This dataset provides the environmental explanatory variables used to explore spatial patterns in species-environment relationships in Gopherus agassizii and Gopherus morafkai across the subregion encompassing the genetic sampling locations used by Edwards et al. (2015). This region offered an opportunity to explore habitat selection across the ecotone between the Mojave and Sonoran deserts...
Local ecological niche models, genotype associations and environmental data for desert tortoises
These data include environmental covariates used to develop species distribution models for Gopherus agassizii and Gopherus morafkai, along with PCA-reduced environmental covariates used to explore local species-environment relationships within a subregion of the ectone between the two species. We also provide the genotype association used to test the mapped clusters of multiscale...
Local Niche Model
This dataset provides spatial predictions of the pooled-SDM residuals from a multiscale geographically weighted regression model (MGWR) and the resulting local R2 values for individuals in the subregion encompassing the genetic sampling locations used by Edwards et al. (2015). This region offered an opportunity to explore habitat selection across the ecotone between the Mojave and Sonoran...
Incubation Constancy, Number of Incubation Recesses, Recess Duration and Mercury Concentrations for Tree Swallows at the Cosumnes River Preserve 2014
These metadata provide data used to examine tree swallow incubation behavior in relation to egg mercury concentration and maternal blood mercury concentration. These data were collected from tree swallows nesting in artificial wooden nest boxes at the Cosumnes River Preserved in California's Central Valley in 2014. Included are two datasets. One dataset provides daily incubation constancy (the...
The timing of dabbling duckling hatch, nest departure and depredation in Suisun Marsh, California from 2015-2017
These data include a row for each duck nest equipped with a small video camera. We present the location of the nest, the timing of the start of hatch, the timing of the end of hatch, and the timing of the departure of the hen and ducklings from the nest. Additionally, this table includes any predators that were observed at the nest depredating eggs prior to hatch and any predators that were...
LEAN-Corrected San Francisco Bay Digital Elevation Model, 2018
Lidar-derived digital elevation models often contain a vertical bias due to vegetation. In areas with tidal influence the amount of bias can be ecologically significant, for example, by decreasing the expected inundation frequency. We generated a corrected digital elevation mode (DEM) for tidal marsh areas around San Francisco Bay using the Lidar Elevation Adjustment with NDVI (LEAN) technique...
Raster data files for “Prioritizing conserved areas threatened by wildfire for monitoring and management."
The data set consists of 12 input data rasters that cover San Diego County, California. These input rasters represent criteria used in a Pareto ranking algorithm in the manuscript. These include three rasters related to fire threats, three rasters related to habitat fragmentation threats, four rasters related to species biodiversity, and two rasters related to genetic biodiversity. (see the...
Annual marbled murrelet abundance and productivity surveys off central California (Zone 6), 1999-2018
In 2017 and 2018, USGS Western Ecological Research Center (USGS WERC) partnered with California State Parks to continue long-term, at-sea surveys to estimate at-sea abundance and juvenile (i.e. hatch-year) productivity of Marbled Murrelets (Brachyramphus marmoratus) in US Fish and Wildlife Service Conservation Zone 6 (central California: San Francisco Bay to Monterey Bay). Marbled Murrelets...
Demographic data and location information for the endangered Gailum buxifolium from 2005 to 2014 on Santa Cruz and San Miguel Islands, California
The sea-cliff bedstraw (Galium buxifolium) data set contains two types of information, formatted as CSV worksheets: 1) Spatial coordinates (WGS 84) of known population occurrences on Santa Cruz and San Miguel Islands, California, as of 2006 (sensitive locality information); 2) Demographic data measured at four populations growing on Santa Cruz Island. Three of the populations were measured in...
Tree mortality in Sequoia National Park from 2004 to 2007 and during severe drought in 2014 to 2017
These data describe tree mortality and the factors associated with tree mortality for a variety of plots in Sequoia National Park. Most of the data were collected between 2014 and 2017 (during an extremely severe drought), along with some comparison data from 2004 to 2007.