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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Identifying the ecological and management implications of mangrove migration in the northern Gulf of Mexico Identifying the ecological and management implications of mangrove migration in the northern Gulf of Mexico

Climate change is transforming ecosystems and affecting ecosystem goods and services. Along the Gulf of Mexico and Atlantic coasts of the southeastern United States, the frequency and intensity of extreme freeze events greatly influences whether coastal wetlands are dominated by freeze-sensitive woody plants (mangrove forests) or freeze-tolerant grass-like plants (salt marshes). In...
Authors
Michael Osland

Physiological and nutritional constraints on zooplankton productivity due to eutrophication and climate change predicted using a resource-based modeling approach Physiological and nutritional constraints on zooplankton productivity due to eutrophication and climate change predicted using a resource-based modeling approach

Emerging evidence suggests that zooplankton production is affected by physiological and nutritional constraints due to climate change and eutrophication, which in turn could have broad implications for food-web dynamics and fisheries production. In this study, we developed a resource-based zooplankton production dynamics model that causally links freshwater cladoceran and copepod daily...
Authors
Chen Zhang, Michael T. Brett, Jens M Nielsen, George B Arhonditsis, Ashley P Ballantyne, Jackie L Carter, Jacob Kann, Dorthe C Muller-Navarra, Daniel E. Schindler, Jason D. Stockwell, Monika Winder, David Beauchamp

Disruption of the Francisella noatunensis orientalis pdpA gene results in virulence attenuation and protection in zebrafish Disruption of the Francisella noatunensis orientalis pdpA gene results in virulence attenuation and protection in zebrafish

Several Francisella spp. including F. noatunensis are regarded as important emerging pathogens of wild and farmed fish. However, very few studies have investigated the virulence factors that allow these bacterial species to be pathogenic in fish. The Francisella Pathogenicity Island (FPI) is a well-described, gene-dense region encoding major virulence factors for the genus Francisella...
Authors
John Hansen, Karina Ray, Po-Jui Chen, Susan Yun, Diane G. Elliott, Carla M. Conway, Michael Culcutt, Maureen K. Purcell, Timothy J Welch, John Patrick Bellah, Ellie Maureen Dalsky, Justin Blaine Greer, Esteban Soto

Amphibian population responses to mitigation: Relative importance of wetland age and design Amphibian population responses to mitigation: Relative importance of wetland age and design

Wetland creation is a common practice to mitigate for the loss of natural wetlands. However, there is still uncertainty about how effectively created wetlands replace habitat provided by natural wetlands. This uncertainty is due in part because post-construction monitoring of biological communities, and vertebrates especially, is rare and typically short-term (
Authors
Emily Bea Oja, Leah S Swartz, Erin L. Muths, Blake R. Hossack

Large California wildfires: 2020 fires in historical context Large California wildfires: 2020 fires in historical context

Background California in the year 2020 experienced a record breaking number of large fires. Here, we place this and other recent years in a historical context by examining records of large fire events in the state back to 1860. Since drought is commonly associated with large fire events, we investigated the relationship of large fire events to droughts over this 160 years period.Results...
Authors
Jon Keeley, Alexandra D. Syphard

Solutions in microbiome engineering: Prioritizing barriers to organism establishment Solutions in microbiome engineering: Prioritizing barriers to organism establishment

Microbiome engineering is increasingly being employed as a solution to challenges in health, agriculture, and climate. Often manipulation involves inoculation of new microbes designed to improve function into a preexisting microbial community. Despite, increased efforts in microbiome engineering inoculants frequently fail to establish and/or confer long-lasting modifications on ecosystem...
Authors
Michaeline B.N. Albright, Stilianos Louca, Daniel E. Winkler, Kelli L. Feeser, Sarah-Jane Haig, Katrine L. Whiteson, Joanne B. Emerson, John M. Dunbar

Structured decision making and optimal bird monitoring in the northern Gulf of Mexico Structured decision making and optimal bird monitoring in the northern Gulf of Mexico

The avian conservation community struggles to design and implement large scale, long-term coordinated bird monitoring programs within the northern Gulf of Mexico due to the complexity of the conservation enterprise in the region; this complexity arises from the diverse stakeholders, multiple jurisdictions, complex ecological processes, myriad habitats, and over 500 species of birds using...
Authors
Auriel Fournier, R. Randy Wilson, James E. Lyons, Jeffrey S. Gleason, Evan M. Adams, Laurel M. Barnhill, Janell M. Brush, Robert J. Cooper, Stephen J. DeMaso, Melanie J.L. Driscoll, Mitchell J. Eaton, Peter C. Frederick, Michael G. Just, Michael A. Seymour, John M. Tirpak, Mark S. Woodrey

National seed strategy progress report, 2015-2020 National seed strategy progress report, 2015-2020

Native plants are the true green infrastructure we rely on for healthy, resilient, and biodiverse ecosystems. They protect us against climate change and natural disasters; create habitat for wildlife, rare species, and pollinators; and are vital for carbon sequestration. Without native plants, especially their seeds, we do not have the ability to restore functional ecosystems after...
Authors
Molly Lutisha Mccormick, Amanda N Carr, Patricia DeAngelis, Margaret Olwell, Regan Murray, Maggie Park

Assessing the ecological functionality and integrity of natural ponds, excavated ponds and stormwater basins for conserving amphibian diversity Assessing the ecological functionality and integrity of natural ponds, excavated ponds and stormwater basins for conserving amphibian diversity

Wetlands provide ecological functionality by maintaining and promoting regional biodiversity supporting quality habitat for aquatic organisms. Globally, habitat loss, fragmentation and degradation due to increases in agricultural activities and urban development have reduced or altered geographically isolated wetlands, thus reducing biodiversity. The objective of this study was to assess...
Authors
Kelly L. Smalling, Sara E. Breitmeyer, John F. Bunnell, Kim J Laidig, Patrick Burritt, Marilyn Sobel, Jonathan Cohl, Michelle L. Hladik, Kristin M. Romanok, Paul M. Bradley

Historical floods and geomorphic change in the lower Little Colorado River during the late 19th to early 21st centuries Historical floods and geomorphic change in the lower Little Colorado River during the late 19th to early 21st centuries

The Little Colorado River is a major tributary to the Colorado River with a confluence at the boundary between Marble and Grand Canyons within Grand Canyon National Park, Arizona. The bedrock gorge of the lower Little Colorado River is home to the largest known population of Gila cypha (humpback chub), an endangered fish endemic to the Colorado River Basin. Channel conditions might...
Authors
Joel A. Unema, David J. Topping, Keith Kohl, Michael J. Pillow, Joshua J. Caster

COVID-19 influences on US recreational angler behavior COVID-19 influences on US recreational angler behavior

Recreational angling in the United States (US) is largely a personal hobby that scales up to a multibillion-dollar economic activity. Given dramatic changes to personal decisions and behaviors resulting from the COVID-19 pandemic, we surveyed recreational anglers across the US to understand how the pandemic may have affected their fishing motivations and subsequent activities. Nearly a...
Authors
Stephen R. Midway, Abigail J. Lynch, Brandon K. Peoples, Michael A. Dance, Rex Caffey

Comparative effects of energy-related saline wastewaters and sodium chloride on hatching, survival, and fitness-associated traits of two amphibian species Comparative effects of energy-related saline wastewaters and sodium chloride on hatching, survival, and fitness-associated traits of two amphibian species

Salinity (sodium chloride [NaCl]) is a prevalent and persistent contaminant that negatively affects freshwater ecosystems. Although most studies focus on effects of salinity from road salts (primarily NaCl), high-salinity wastewaters from energy extraction (wastewaters) could be more harmful because they contain NaCl and other toxic components. Many amphibians are sensitive to salinity...
Authors
Brian J. Tornabene, Creagh Breuner, Blake R. Hossack
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