Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42702
Drivers of methane flux differ between lakes and reservoirs, complicating global upscaling efforts Drivers of methane flux differ between lakes and reservoirs, complicating global upscaling efforts
Methane is an important greenhouse gas with growing atmospheric concentrations. Freshwater lakes and reservoirs contribute substantially to atmospheric methane concentrations, but the magnitude of this contribution is poorly constrained. Uncertainty stems partially from whether the sites currently sampled represent the global population as well as incomplete knowledge of which...
Authors
Bridget Deemer, Meredith A. Holgerson
Fipronil pellets reduce flea abundance on black-tailed prairie dogs: Potential tool for plague management and black-footed ferret conservation Fipronil pellets reduce flea abundance on black-tailed prairie dogs: Potential tool for plague management and black-footed ferret conservation
In western North America, sylvatic plague (a flea-borne disease) poses a significant risk to endangered black-footed ferrets (Mustela nigripes) and their primary prey, prairie dogs (Cynomys spp.). Pulicides (flea-killing agents) can be used to suppress fleas and thereby manage plague. In South Dakota, US, we tested edible “FipBit” pellets, each containing 0.84 mg fipronil, on free-living...
Authors
David A. Eads, Travis M. Livieri, Phillip Dobesh, Eddie Childers, Lauren Noble, Michele Vasquez, Dean E. Biggins
Reconnaissance of cumulative risk of pesticides and pharmaceuticals in Great Smoky Mountains National Park streams Reconnaissance of cumulative risk of pesticides and pharmaceuticals in Great Smoky Mountains National Park streams
The United States (US) National Park Service (NPS) manages protected public lands to preserve biodiversity. Exposure to and effects of bioactive organic contaminants in NPS streams are challenges for resource managers. Recent assessment of pesticides and pharmaceuticals in protected-streams within the urbanized NPS Southeast Region (SER) indicated the importance of fluvial inflows from...
Authors
Paul M. Bradley, Matt A. Kulp, Bradley J. Huffman, Kristin M. Romanok, Kelly L. Smalling, Sara E. Breitmeyer, Jimmy Clark, Celeste A. Journey
Embryo deformities and nesting trends in Kemp’s ridley sea turtles Lepidochelys kempii before and after the Deepwater Horizon oil spill Embryo deformities and nesting trends in Kemp’s ridley sea turtles Lepidochelys kempii before and after the Deepwater Horizon oil spill
Kemp’s ridley sea turtles Lepidochelys kempii were disproportionately affected by the Deepwater Horizon (DWH) oil spill, which began on 20 April 2010. Embryo deformities were documented in inviable L. kempii eggs before (2008-2010) and after (2011-2013) the DWH spill in 2 Texas (USA) nesting areas (Upper Texas Coast and Padre Island National Seashore). Additional nesting trends...
Authors
Donna J. Shaver, Christian Gredzens, J. Shelby Walker, Céline A. J. Godard-Codding, Janet E. Yacabucci, Amy Frey, Peter H. Dutton, Christopher J. Schmitt
Hydroacoustic survey standardization: Inter-vessel differences in fish densities and potential effects of vessel avoidance Hydroacoustic survey standardization: Inter-vessel differences in fish densities and potential effects of vessel avoidance
Hydroacoustics is used broadly to assess fish populations in marine and freshwater systems. Large-scale surveys often employ multiple vessels to complete a survey. Vessels can be a source of variation in multi-vessel surveys, and accounting for this variation is critical to precise and accurate assessments, whether as indices or measures of absolute abundance. We examined areal and...
Authors
Mark D. DuFour, Patrick Kocovsky, J Deller, Paul W. Simonin, Lars G. Rudstam
Investigation of algal toxins in a multispecies seabird die-off in the Bering and Chukchi seas Investigation of algal toxins in a multispecies seabird die-off in the Bering and Chukchi seas
Between 2014 and 2017, widespread seabird mortality events were documented annually in the Bering and Chukchi seas, concurrent with dramatic reductions of sea ice, warmer than average ocean temperatures, and rapid shifts in marine ecosystems. Among other changes in the marine environment, harmful algal blooms (HABs) that produce the neurotoxins saxitoxin (STX) and domoic acid (DA) have...
Authors
Caroline R. Van Hemert, Robert J. Dusek, Matthew M. Smith, Robert Kaler, Gay Sheffield, Lauren M. Divine, Kathy J. Kuletz, Susan Knowles, Julia S. Lankton, D. Ransom Hardison, R. Wayne Litaker, Timothy Jones, Hillary K. Burgess, Julia K. Parrish
Exploration of the 2016 Yellowstone River fish kill and proliferative kidney disease in wild fish populations Exploration of the 2016 Yellowstone River fish kill and proliferative kidney disease in wild fish populations
Proliferative kidney disease (PKD) is an emerging disease that recently resulted in a large mortality event of salmonids in the Yellowstone River (Montana, USA). Total PKD fish mortalities in the Yellowstone River were estimated in the tens of thousands, which resulted in a multi‐week river closure and an estimated economic loss of US$500,000. This event shocked scientists, managers, and...
Authors
Patrick Ross Hutchins, Adam Sepulveda, Hanna Hartikainen, Ken D. Staigmiller, Scott T. Opitz, Renee M. Yamamoto, Amberly Huttinger, Rick J. Cordes, Tammy Weiss, Lacey R. Hopper, Maureen K. Purcell, Beth Okamura
Across borders: External factors and prior behaviour influence North Pacific albatross associations with fishing vessels Across borders: External factors and prior behaviour influence North Pacific albatross associations with fishing vessels
Understanding encounters between marine predators and fisheries across national borders and outside national jurisdictions offers new perspectives on unwanted interactions to inform ocean management and predator conservation. Although seabird–fisheries overlap has been documented at many scales, remote identification of vessel encounters has lagged because vessel movement data often are...
Authors
Rachael A Orben, Josh Adams, Michelle M. Hester, Scott A. Shaffer, Robert M. Suryan, Tomo Deguchi, Kiyoaki Ozaki, Fumio Sato, Lindsay C. Young, Corey A. Clatterbuck, Melinda G. Conners, David A Kroodsma, Leigh G Torres
Forecasting ecological responses for wetland restoration planning in Florida's Everglades Forecasting ecological responses for wetland restoration planning in Florida's Everglades
The Everglades wetland was once a river of grass, with water flowing slowly through the sawgrass, southward across the landscape. As developers took hold of south Florida, water was sent away from the heart of the Everglades through canals and levees to protect the former wetland for residential and agricultural development. In the 1990s, planning began to restore the Everglades in what...
Authors
Stephanie Romanach, Leonard G. Pearlstine
Sarcoptic mange: An emerging panzootic in wildlife Sarcoptic mange: An emerging panzootic in wildlife
Sarcoptic mange, a skin infestation caused by the mite Sarcoptes scabiei, is an emerging disease for some species of wildlife, potentially jeopardizing their welfare and conservation. Sarcoptes scabiei has a near-global distribution facilitated by its forms of transmission and use of a large diversity of host species (many of those with broad geographic distribution). In this review, we...
Authors
L. E. Escobar, Scott Carver, Paul C. Cross, Luca Rossi, E. S. Almberg, M. J. Yabsley, K D Niedringhaus, Peach Van Wick, Ernesto Dominguez-Villegas, F.F. Gakuya, Yue Xie, Samer Angelone, Christian Gortazar, Francisca Astorga
Assessment of sea lamprey (Petromyzon marinus) diet using DNA metabarcoding of feces Assessment of sea lamprey (Petromyzon marinus) diet using DNA metabarcoding of feces
Sea lamprey (Petromyzon marinus) are invasive in the Laurentian Great Lakes, parasitize large-bodied fishes, and therefore are the focus of an international control program. However, damage caused by sea lamprey to modern day fish stocks remains uncertain because diet analysis of juvenile sea lamprey has been challenging; they feed on blood and are difficult to randomly sample in the...
Authors
Nicholas S. Johnson, Sean A. Lewandoski, Christopher M. Merkes
Genetic structure of Maryland Brook Trout populations: Management implications for a threatened species Genetic structure of Maryland Brook Trout populations: Management implications for a threatened species
Brook Trout Salvelinus fontinalis have declined across their native range due to multiple anthropogenic factors, including landscape alteration and climate change. Although coldwater streams in Maryland (eastern United States) historically supported significant Brook Trout populations, only fragmented remnant populations remain, with the exception of the upper Savage River watershed in...
Authors
Raymond P. Morgan II, David C. Kazyak, Tim L. King, Barbara A. Lubinski, Matthew T. Sell, Alan A Heft, Jess W Jones