Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42871
Microbiomes from biorepositories? 16S rRNA bacterial amplicon sequencing of archived and contemporary intestinal samples of wild mammals (Eulipotyphla: Soricidae) Microbiomes from biorepositories? 16S rRNA bacterial amplicon sequencing of archived and contemporary intestinal samples of wild mammals (Eulipotyphla: Soricidae)
Interest in gut microbial community composition has exploded recently as a result of the increasing ability to characterize these organisms and a growing understanding of their role in host fitness. New technologies, such as next generation amplicon (16S rRNA) sequencing, have enabled identification of bacterial communities from samples of diverse origin (e.g., fecal, skin, genital...
Authors
Stephen E. Greiman, Joseph A. Cook, Timothy Odem, Katelyn Cranmer, Schuyler W Liphardt, Damian M. Menning, Sarah A. Sonsthagen, Sandra L. Talbot
The effects of management practices on grassland birds—Sedge Wren (Cistothorus stellaris) The effects of management practices on grassland birds—Sedge Wren (Cistothorus stellaris)
Keys to Sedge Wren (Cistothorus stellaris) management include providing tall, dense grasslands with moderate forb coverage and minimizing disturbances during the breeding season. Sedge Wrens have been reported to use habitats with 30–166 centimeters (cm) average vegetation height, 8–80 cm visual obstruction reading, 15–75 percent grass cover, 3–78 percent forb cover, less than or equal...
Authors
Jill A. Shaffer, Lawrence D. Igl, Douglas H. Johnson, Marriah L. Sondreal, Christopher M. Goldade, Barry D. Parkin, Travis L. Wooten, Betty R. Euliss
The effects of management practices on grassland birds—Lesser Prairie-Chicken (Tympanuchus pallidicinctus) The effects of management practices on grassland birds—Lesser Prairie-Chicken (Tympanuchus pallidicinctus)
The key to Lesser Prairie-Chicken (Tympanuchus pallidicinctus) management is maintaining expansive sand shinnery oak (Quercus havardii) or sand sagebrush (Artemisia filifolia) grasslands. Within these grasslands, areas should contain short herbaceous cover for lek sites (that is, an area where male prairie-chickens gather to engage in courtship displays to attract mates); shrubs or tall...
Authors
Brent E. Jamison, Lawrence D. Igl, Jill A. Shaffer, Douglas H. Johnson, Christopher M. Goldade, Betty R. Euliss
Coastal marsh degradation into ponds induces irreversible elevation loss relative to sea level Coastal marsh degradation into ponds induces irreversible elevation loss relative to sea level
Coastal marshes and their valuable ecosystem services are feared to be lost by sea level rise, yet the mechanisms of marsh degradation into ponds and potential recovery are poorly understood. We quantified and analyzed elevations of marsh surfaces and pond bottoms along a marsh loss gradient (Blackwater River, Maryland, USA). Our analyses show that ponds deepen with increasing tidal...
Authors
Lennert Schepers, Patrick Brennand, Matthew L. Kirwan, Glenn R. Guntenspergen, Stijn Temmerman
Influenza A viruses remain infectious for more than seven months in northern wetlands of North America Influenza A viruses remain infectious for more than seven months in northern wetlands of North America
In this investigation, we used a combination of field- and laboratory-based approaches to assess if influenza A viruses (IAVs) shed by ducks could remain viable for extended periods in surface water within three wetland complexes of North America. In a field experiment, replicate filtered surface water samples inoculated with duck swabs were tested for IAVs upon collection and again...
Authors
Andrew M. Ramey, Andrew B. Reeves, Judith Z. Drexler, Joshua T. Ackerman, Susan E.W. De La Cruz, Andrew S. Lang, Christina Leyson, Paul T. Link, Diann Prosser, Gregory J. Robertson, Jordan Wight, Sungsu Youk, Erica Spackman, Mary Pantin-Jackwood, Rebecca L. Poulson, David E. Stallknecht
Giant Gartersnakes (Thamnophis gigas) exploit abundant non-native prey while maintaining their appetite for native anurans Giant Gartersnakes (Thamnophis gigas) exploit abundant non-native prey while maintaining their appetite for native anurans
The introductions of nonnative species can cause great change in the trophic dynamics of native species. Giant Gartersnakes, endemic predators in the Central Valley of California, are listed as threatened because of the conversion of their once vast wetland habitat to agriculture. Further contributing to this snake's changing ecology is the introduction of many nonnative prey species...
Authors
Julia Ersan, Brian J. Halstead, Erica L Wildy, Michael L. Casazza, Glenn D. Wylie
Review of methods to repair and maintain lithophilic fish spawning habitat Review of methods to repair and maintain lithophilic fish spawning habitat
Rocky reefs provide important spawning and refuge habitats for lithophilic spawning fishes. However, many reefs have been lost or severely degraded through anthropogenic effects like dredging, channelization, or sedimentation. Constructed reefs have been used to mitigate these effects in some systems, but these reefs are also subject to degradation which may warrant custodial maintenance
Authors
Audrey Baetz, Taaja Tucker, Robin DeBruyne, Alex Gatch, T. Hook, J. Fischer, Edward F. Roseman
Climate change Is likely to alter future wolf - moose - forest interactions at Isle Royale National Park, United States Climate change Is likely to alter future wolf - moose - forest interactions at Isle Royale National Park, United States
We evaluated how climate change and variable rates of moose browsing intensity, as they relate to wolf predation, might affect the forests of Isle Royale National Park, Michigan, United States by conducting a modeling experiment. The experiment consisted of contrasting three different scenarios of wolf management and with a static (current conditions) and changing climate (high emissions...
Authors
Nathan R. De Jager, Jason J. Rohweder, Matthew J. Duveneck
Effects of water level alteration on carbon cycling in peatlands Effects of water level alteration on carbon cycling in peatlands
Globally, peatlands play an important role in the carbon (C) cycle. High water level is a key factor in maintaining C storage in peatlands, but water levels are vulnerable to climate change and anthropogenic disturbance. This review examines literature related to the effects of water level alteration on C cycling in peatlands to summarize new ideas and uncertainties emerging in this...
Authors
Yehui Zhong, Jiang Ming, Beth Middleton
Endocrine disrupting activities and geochemistry of water resources associated with unconventional oil and gas activity Endocrine disrupting activities and geochemistry of water resources associated with unconventional oil and gas activity
The rise of hydraulic fracturing and unconventional oil and gas (UOG) exploration in the United States has increased public concerns for water contamination induced from hydraulic fracturing fluids and associated wastewater spills. Herein, we collected surface and groundwater samples across Garfield County, Colorado, a drilling-dense region, and measured endocrine bioactivities...
Authors
Christopher D. Kassotis, Jennifer S. Harkness, Phuc H. Vo, Danh C. Vu, Kate Hoffman, Katelyn M. Cinnamon, Jennifer N. Cornelius-Green, Avner Vengosh, Chung-Ho Lin, Donald E. Tillitt, Robin L. Kruse, Jane A. McElroy, Susan C. Nagel
Drivers and consequences of apex predator diet composition in the Canadian Beaufort Sea Drivers and consequences of apex predator diet composition in the Canadian Beaufort Sea
Polar bears (Ursus maritimus) rely on annual sea ice as their primary habitat for hunting marine mammal prey. Given their long lifespan, wide geographic distribution, and position at the top of the Arctic marine food web, the diet composition of polar bears can provide insights into temporal and spatial ecosystem dynamics related to climate-mediated sea ice loss. Polar bears with the...
Authors
Katie R. N. Florko, Gregory W. Thiemann, Jeffrey F. Bromaghin
Assessing the ecological risks of per‐ and polyfluoroalkyl substances: Current state‐of‐the science and a proposed path forward Assessing the ecological risks of per‐ and polyfluoroalkyl substances: Current state‐of‐the science and a proposed path forward
Per‐ and poly‐fluoroalkyl substances (PFAS) encompass a large, heterogenous group of chemicals of potential concern to human health and the environment. Based on information for a few relatively well‐understood PFAS such as perfluorooctane sulfonate and perfluorooctanoate, there is ample basis to suspect that at least a subset can be considered persistent, bioaccumulative, and/or toxic...
Authors
Gerald T. Ankley, Philippa Cureton, Robert A. Hoke, Magali Houde, Anupama Kumar, Jessy Kurias, Roman P. Lanno, Chris McCarthy, John L. Newsted, Christopher J. Salice, Bradley E. Sample, Maria S. Sepúlveda, Jeffery A. Steevens, Sara Valsecchi