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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Benefits of the destinations, not costs of the journeys, shape partial migration patterns Benefits of the destinations, not costs of the journeys, shape partial migration patterns

1. The reasons that lead some animals to seasonally migrate, and others to remain in the same area year-round, are poorly understood. Associations between traits, such as body size, and migration provide clues. For example, larger species and individuals are more likely to migrate. 2. One explanation for this size bias in migration is that larger animals are capable of moving faster...
Authors
Charles B. Yackulic, Stephen Blake, Guillaume Bastille-Rousseau

The Nitrogen Footprint Tool network: A multi-institution program to reduce nitrogen pollution The Nitrogen Footprint Tool network: A multi-institution program to reduce nitrogen pollution

Anthropogenic sources of reactive nitrogen have local and global impacts on air and water quality and detrimental effects on human and ecosystem health. This paper uses the nitrogen footprint tool (NFT) to determine the amount of nitrogen (N) released as a result of institutional consumption. The sectors accounted for include food (consumption and upstream production), energy...
Authors
Elizabeth A. Castner, Allison M. Leah, Neal Leary, Jill Baron, Jana E. Compton, James N. Galloway, Meredith G. Hastings, Jacob Kimiecik, Jonathan Lantz-Trissel, Elizabeth de la Riguera, Rebecca Ryals

δ13C and d15N in the endangered Kemp’s ridley sea turtle Lepidochelys kempii after the Deepwater Horizon oil spill δ13C and d15N in the endangered Kemp’s ridley sea turtle Lepidochelys kempii after the Deepwater Horizon oil spill

The Deepwater Horizon explosion in April 2010 and subsequent oil spill released 3.19 × 106 barrels (5.07 × 108 L) of MC252 crude oil into important foraging areas of the endangered Kemp’s ridley sea turtle Lepidochelys kempii (Lk) in the northern Gulf of Mexico (GoM). We measured δ13C and δ15N in scute biopsy samples from 33 Lk nesting in Texas during 2010–-12. Of these, 27 were equipped...
Authors
Kimberly J. Reich, Melania C. Lopez-Castro, Donna J. Shaver, Claire Iseton, Kristen M. Hart, Michael J. Hooper, Christopher J. Schmitt

Integrated species distribution models: combining presence-background data and site-occupancy data with imperfect detection Integrated species distribution models: combining presence-background data and site-occupancy data with imperfect detection

Two main sources of data for species distribution models (SDMs) are site-occupancy (SO) data from planned surveys, and presence-background (PB) data from opportunistic surveys and other sources. SO surveys give high quality data about presences and absences of the species in a particular area. However, due to their high cost, they often cover a smaller area relative to PB data, and are...
Authors
Vira Koshkina, Yang Wang, Ascelin Gordon, Robert Dorazio, Matthew White, Lewi Stone

Effects of experimental removal of barred owls on population demography of northern spotted owls in Washington and Oregon—2016 progress report Effects of experimental removal of barred owls on population demography of northern spotted owls in Washington and Oregon—2016 progress report

Evidence indicates that competition with invasive barred owls (Strix varia) is causing rapid declines in populations of northern spotted owls (S. occidentalis caurina), and that the long-term persistence of spotted owls may be in question without additional management intervention. A pilot study in California showed that removal of barred owls in combination with habitat conservation may...
Authors
J. David Wiens, Katie M. Dugger, Krista E. Lewicki, David C. Simon

Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV) Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV)

Methods for a plaque neutralization test (PNT) were optimized for the detection and quantification of viral hemorrhagic septicemia virus (VHSV) neutralizing activity in the plasma of Pacific Herring Clupea pallasii. The PNT was complement dependent, as neutralizing activity was attenuated by heat inactivation; further, neutralizing activity was mostly restored by the addition of...
Authors
Lucas Hart, Ashley MacKenzie, Maureen K. Purcell, Rachel L. Thompson, Paul Hershberger

Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus

Introductions of low-pathogenic avian influenza (LPAI) viruses of subtypes H5 and H7 into poultry from wild birds have the potential to mutate to highly pathogenic avian influenza (HPAI) viruses, but such viruses' origins are often unclear. In January 2016, a novel H7N8 HPAI virus caused an outbreak in turkeys in Indiana, USA. To determine the virus's origin, we sequenced the genomes of...
Authors
Yifei Xu, Andrew M. Ramey, Andrew S. Bowman, Thomas J. DeLiberto, Mary L. Killian, Scott Krauss, Jacqueline M. Nolting, Mia Kim Torchetti, Andrew B. Reeves, Richard J. Webby, David E. Stallknecht, Xiu-Feng Wan

Geomorphic process from topographic form: automating the interpretation of repeat survey data in river valleys Geomorphic process from topographic form: automating the interpretation of repeat survey data in river valleys

The ability to quantify the processes driving geomorphic change in river valley margins is vital to geomorphologists seeking to understand the relative role of transport mechanisms (e.g. fluvial, aeolian, and hillslope processes) in landscape dynamics. High-resolution, repeat topographic data are becoming readily available to geomorphologists. By contrasting digital elevation models...
Authors
Alan Kasprak, Joshua J. Caster, Sara G. Bangen, Joel B. Sankey

Environmental Escherichia coli: Ecology and public health implications - A review Environmental Escherichia coli: Ecology and public health implications - A review

Escherichia coli is classified as a rod-shaped, Gram-negative bacterium in the family Enterobacteriaceae. The bacterium mainly inhabits the lower intestinal tract of warm-blooded animals, including humans, and is often discharged into the environment through feces or wastewater effluent. The presence of E. coli in environmental waters has long been considered as an indicator of recent...
Authors
Jeonghwan Jang, Hor-Gil Hur, Michael J. Sadowsky, Muruleedhara Byappanahalli, Tao Yan, Satoshi Ishii

Pacific Island landbird monitoring report, Hawaiʻi Volcanoes National Park, 2015-2016: Tract groups 1 and 2 Pacific Island landbird monitoring report, Hawaiʻi Volcanoes National Park, 2015-2016: Tract groups 1 and 2

Hawaiʻi Volcanoes National Park (HAVO) was surveyed for landbirds and landbird habitat from February through April 2015 and February through April 2016. This information provides the second datum in the time-series of Pacific Island Network (PACN) monitoring for long-term trends in landbird distribution, density, and abundance. Initial PACN surveys were conducted in 2010 and are repeated...
Authors
Seth Judge, Richard J. Camp, Daniel Sedgwick, Carine Squibb, Patrick J. Hart

Quantifying the demographic cost of human-related mortality to a raptor population Quantifying the demographic cost of human-related mortality to a raptor population

Raptors are exposed to a wide variety of human-related mortality agents, and yet population-level effects are rarely quantified. Doing so requires modeling vital rates in the context of species life-history, behavior, and population dynamics theory. In this paper, we explore the details of such an analysis by focusing on the demography of a resident, tree-nesting population of golden...
Authors
W. Grainger Hunt, David Wiens, Peter R. Law, Mark R. Fuller, Teresa L. Hunt, Daniel E. Driscoll, Ronald E. Jackman
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