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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42999

Infectious hematopoietic necrosis virus virological and genetic surveillance 2000–2012 Infectious hematopoietic necrosis virus virological and genetic surveillance 2000–2012

Surveillance records of the acute RNA pathogen of Pacific salmonid fish infectious hematopoietic necrosis virus are combined for the first time to enable landscape-level ecological analyses and modeling. The study area is the freshwater ecosystems of the large Columbia River watershed in the U.S. states of Washington, Oregon, and Idaho, as well as coastal rivers in Washington and Oregon...
Authors
Rachel Breyta, Ilana L. Brito, Gael Kurath, Shannon L. LaDeau

Mercury bioaccumulation in estuarine fishes: Novel insights from sulfur stable isotopes Mercury bioaccumulation in estuarine fishes: Novel insights from sulfur stable isotopes

Estuaries are transitional habitats characterized by complex biogeochemical and ecological gradients that result in substantial variation in fish total mercury concentrations (THg). We leveraged these gradients and used carbon (δ13C), nitrogen (δ15N), and sulfur (δ34S) stable isotopes to examine the ecological and biogeochemical processes underlying THg bioaccumulation in fishes from the...
Authors
James J. Willacker, Collin A. Eagles-Smith, Joshua T. Ackerman

Nutrients, phytoplankton, zooplankton, and macrobenthos Nutrients, phytoplankton, zooplankton, and macrobenthos

Lower trophic levels support the prey fish on which most sport fish depend. Therefore, understanding the production potential of lower trophic levels is integral to the management of Lake Ontario’s fishery resources. Lower trophic-level productivity differs among offshore and nearshore waters. In the offshore, there is concern about the ability of the lake to support Alewife (Table 1)...
Authors
Lars G. Rudstam, Kristen T. Holeck, James M. Watkins, Christopher Hotaling, Jana R. Lantry, Kelly L. Bowen, Mohi Munawar, Brian Weidel, Richard Barbiero, Frederick J. Luckey, Alice Dove, Timothy B. Johnson, Zy Biesinger

Salinity influences on aboveground and belowground net primary productivity in tidal wetlands Salinity influences on aboveground and belowground net primary productivity in tidal wetlands

Tidal freshwater wetlands are one of the most vulnerable ecosystems to climate change and rising sea levels. However salinification within these systems is poorly understood, therefore, productivity (litterfall, woody biomass, and fine roots) were investigated on three forested tidal wetlands [(1) freshwater, (2) moderately saline, and (3) heavily salt-impacted] and a marsh along the...
Authors
Kathryn N. Pierfelice, B. Graeme Lockaby, Ken W. Krauss, William H. Conner, Gregory E. Noe, Matthew C. Ricker

Time within reproductive season, but not age or inbreeding coefficient, influences seminal and sperm quality in the whooping crane (Grus americana) Time within reproductive season, but not age or inbreeding coefficient, influences seminal and sperm quality in the whooping crane (Grus americana)

All living whooping cranes (Grus americana) are descended from 16 or fewer birds that remained alive in the early 1940s, a bottleneck that puts the species at potential risk for inbreeding depression. Although AI is commonly used in the management of the captive population of this species, little is known about seminal traits or factors affecting sperm quality in the whooping crane. In...
Authors
M.E. Brown, Sarah J. Converse, Jane N. Chandler, A. L. Crosier, W. Lynch, D.E. Wildt, C. L. Keefer, Nucharin Songsasen

Testing the limits of temporal stability: Willingness to pay values among Grand Canyon whitewater boaters across decades Testing the limits of temporal stability: Willingness to pay values among Grand Canyon whitewater boaters across decades

We directly compare trip willingness to pay (WTP) values between 1985 and 2015 stated preference surveys of private party Grand Canyon boaters using identically designed valuation methods. The temporal gap of 30 years between these two studies is well beyond that of any tests of WTP temporal stability in the literature. Comparisons were made of mean WTP estimates for four hypothetical...
Authors
Chris J. Neher, John Duffield, Lucas S. Bair, David A. Patterson, Katherine Neher

Production and evaluation of YY-male Brook Trout to eradicate nonnative wild brook trout populations Production and evaluation of YY-male Brook Trout to eradicate nonnative wild brook trout populations

Nonnative Brook Trout Salvelinus fontinalis were introduced throughout western North America in the early 1900s, resulting in widespread self-sustaining populations that are difficult to eradicate and often threaten native salmonid populations. A novel approach for their eradication involves use of YY male (MYY) Brook Trout (created in the hatchery by feminizing XY males and crossing...
Authors
Patrick Kennedy, Daniel J. Schill, Kevin A. Meyer, Matthew R. Campbell, Ninh V. Vu, Michael J. Hansen

Effect of N fertilization and tillage on nitrous oxide (N2O) loss from soil under wheat production Effect of N fertilization and tillage on nitrous oxide (N2O) loss from soil under wheat production

Nitrous oxide (N2O-N) is one of the most important gases in the atmosphere because it is 300 times more powerful than carbon dioxide in its ability to trap heat, and is a key chemical agent of ozone depletion. The amount of N2O-N emitted from agricultural fields can be quite high, depending on the complex interplay between N fertility and residue management, plant N uptake, microbial...
Authors
Sheel Bansal, Ezra Aberle, Jasper Teboh, Szilvia Yuja, Mark Liebig, Jacob Meier, Alec Boyd

Summer habitat selection by Dall’s sheep in Wrangell-St. Elias National Park and Preserve, Alaska Summer habitat selection by Dall’s sheep in Wrangell-St. Elias National Park and Preserve, Alaska

Sexual segregation occurs frequently in sexually dimorphic species, and it may be influenced by differential habitat requirements between sexes or by social or evolutionary mechanisms that maintain separation of sexes regardless of habitat selection. Understanding the degree of sex-specific habitat specialization is important for management of wildlife populations and the design of...
Authors
Gretchen H. Roffler, Layne G. Adams, Mark Hebblewhite

Forest restoration at Redwood National Park: exploring prescribed fire alternatives to second-growth management: a case study Forest restoration at Redwood National Park: exploring prescribed fire alternatives to second-growth management: a case study

Almost half of Redwood National Park is comprised of second-growth forests characterized by high stand density, deficient redwood composition, and low understory biodiversity. Typical structure of young redwood stands impedes the recovery of old-growth conditions, such as dominance of redwood (Sequoia sempervirens (D. Don) Endl.), distinct canopy layers and diverse understory vegetation...
Authors
Eamon Engber, Jason Teraoka, Phillip J. van Mantgem

Investigating impacts of oil and gas development on greater sage-grouse Investigating impacts of oil and gas development on greater sage-grouse

The sagebrush (Artemisia spp.) ecosystem is one of the largest ecosystems in western North America providing habitat for species found nowhere else. Sagebrush habitats have experienced dramatic declines since the 1950s, mostly due to anthropogenic disturbances. The greater sage-grouse (Centrocercus urophasianus) is a sagebrush-obligate species that has experienced population declines...
Authors
Adam Green, Cameron L. Aldridge, Michael S. O’Donnell

Host susceptibility to snake fungal disease is highly dispersed across phylogenetic and functional trait space Host susceptibility to snake fungal disease is highly dispersed across phylogenetic and functional trait space

Emerging infectious diseases (EIDs) reduce host population sizes, cause extinction, disassemble communities, and have indirect negative effects on human well-being. Fungal EIDs have reduced population abundances in amphibians and bats across many species over large areas. The recent emergence of snake fungal disease (SFD) may have caused declines in some snake populations in the Eastern...
Authors
Frank T. Burbrink, Jeffrey M. Lorch, Karen R. Lips
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