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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42710

The influence of species life history and distribution characteristics on species responses to habitat fragmentation in an urban landscape The influence of species life history and distribution characteristics on species responses to habitat fragmentation in an urban landscape

Fragmentation within urbanized environments often leads to a loss of native species diversity; however, variation exists in responses among-species and among-populations within species.We aimed to identify patterns in species biogeography in an urbanized landscape to understand anthropogenic effects on vertebrate communities and identify species that are more sensitive or resilient to...
Authors
Staci M. Amburgey, David A. W. Miller, Carlton J. Rochester, Katy S. Delaney, Seth P. D. Riley, Cheryl S. Brehme, Stacie A. Hathaway, Robert N. Fisher

Rock gnome lichen (Gymnoderma lineare) monitoring assessment, southern Appalachian Mountains, 1983–2008 Rock gnome lichen (Gymnoderma lineare) monitoring assessment, southern Appalachian Mountains, 1983–2008

Rock gnome lichen (Gymnoderma lineare [Evans] Yoshimura and Sharp) was listed as a federally endangered species in 1995. It is endemic to the southern Appalachian Mountains, with most known populations occurring in North Carolina, where it grows on vertical rock faces in the fog zone above an elevation of 1,525 meters or in humid, deep river gorges. Threats to the species include...
Authors
Andrea Woodward

Seal body condition and atmospheric circulation patterns influence polar bear body condition, recruitment, and feeding ecology in the Chukchi Sea Seal body condition and atmospheric circulation patterns influence polar bear body condition, recruitment, and feeding ecology in the Chukchi Sea

Polar bears (Ursus maritimus) are experiencing loss of sea ice habitats used to access their marine mammal prey. Simultaneously, ocean warming is changing ecosystems that support marine mammal populations. The interactive effects of sea ice and prey are not well understood yet may explain spatial‐temporal variation in the response of polar bears to sea ice loss. Here, we examined the...
Authors
Karyn D. Rode, Eric V. Regehr, Jeffrey F. Bromaghin, Ryan H. Wilson, Michelle St. Martin, Justin A. Crawford, Lori T. Quakenbush

Composition and distribution of fish environmental DNA in an Adirondack watershed Composition and distribution of fish environmental DNA in an Adirondack watershed

Background Environmental DNA (eDNA) surveys are appealing options for monitoring aquatic biodiversity. While factors affecting eDNA persistence, capture and amplification have been heavily studied, watershed-scale surveys of fish communities and our confidence in such need further exploration.Methods We characterized fish eDNA compositions using rapid, low-volume filtering with replicate...
Authors
Robert S. Cornman, James E. McKenna, Jennifer A. Fike

Feral horse space use and genetic characteristics from fecal DNA Feral horse space use and genetic characteristics from fecal DNA

Feral horses (Equus ferus caballus) in the western United States are managed by the Bureau of Land Management (BLM) and United States Forest Service in designated areas on public lands with a goal of maintaining populations in balance with multiple uses of the landscape. Small, isolated populations can be at risk of extirpation from stochastic events and deleterious genetic effects...
Authors
Sarah R. B. King, Kathryn A. Schoenecker, Jennifer A. Fike, Sara J. Oyler-McCance

Status of Cisco in Lake Superior in 2017 Status of Cisco in Lake Superior in 2017

This report describes the status of fish species and their habitat in Lake Superior during the reporting period of 2012-2016 in response to achievement of fish community objectives (FCOs) established by fishery managers for the lake. The overarching goal for the FCOs continued to be met as the fish community remained diverse, self-regulating, dominated by indigenous species, and able to...
Authors
Cory Goldsworthy, Daniel L. Yule

State of Lake Superior ecosystem in 2017 State of Lake Superior ecosystem in 2017

This report describes the status of fish species and their habitat in Lake Superior during the reporting period of 2012-2016 in response to achievement of fish community objectives (FCOs) established by fishery managers for the lake. The overarching goal for the FCOs continued to be met as the fish community remained diverse, self-regulating, dominated by indigenous species, and able to...
Authors
Bryan G. Matthias, Thomas R. Hrabik, Joel C. Hoffman, Owen Gorman, Mike J Seider, Michael E. Sierszen, Mark Vinson, Daniel L. Yule, Peder M. Yurista

Analytical validation of two RT-qPCR tests and detection of spring viremia of carp virus (SVCV) in persistently infected koi Cyprinus carpio Analytical validation of two RT-qPCR tests and detection of spring viremia of carp virus (SVCV) in persistently infected koi Cyprinus carpio

Spring viremia of carp virus (SVCV) ia a carp sprivivirus and a member of the genus Sprivivirus within the family Rhabdoviridae. The virus is the etiological agent of spring viremia of carp, a disease of cyprinid species including koi Cyprinus carpio L. and notifiable to the World Organisation for Animal Health. The goal of this study was to explore hypotheses regarding inter-genogroup...
Authors
Sharon C Clouthier, Tamara Schroeder, Emma K Bueren, Eric D. Anderson, Eveline Emmenegger

Implications of historical and contemporary processes on genetic differentiation of a declining boreal songbird: The rusty blackbird Implications of historical and contemporary processes on genetic differentiation of a declining boreal songbird: The rusty blackbird

The arrangement of habitat features via historical or contemporary events can strongly influence genomic and demographic connectivity, and in turn affect levels of genetic diversity and resilience of populations to environmental perturbation. The rusty blackbird (Euphagus carolinus) is a forested wetland habitat specialist whose population size has declined sharply (78%) over recent...
Authors
Robert E. Wilson, Steven M. Matsuoka, Luke L. Powell, James A. Johnson, Dean W. Demarest, Diana Stralberg, Sarah A. Sonsthagen

Accommodating the role of site memory in dynamic species distribution models Accommodating the role of site memory in dynamic species distribution models

First-order dynamic occupancy models (FODOMs) are a class of state-space model in which the true state (occurrence) is observed imperfectly. An important assumption of FODOMs is that site dynamics only depend on the current state and that variations in dynamic processes are adequately captured with covariates or random effects. However, it is often difficult to understand and/or measure...
Authors
Graziella Vittoria DiRenzo, David A. W. Miller, Blake R. Hossack, Brent H. Sigafus, Paige E. Howell, Erin L. Muths, Evan H. Campbell Grant

Elk migration influences the risk of disease spillover in the Greater Yellowstone Ecosystem Elk migration influences the risk of disease spillover in the Greater Yellowstone Ecosystem

Wildlife migrations provide important ecosystem services, but they are declining. Within the Greater Yellowstone Ecosystem (GYE) some elk (Cervus canadensis) herds are losing migratory tendencies, which may increase spatiotemporal overlap between elk and livestock (domestic bison [Bison bison] and cattle [Bos taurus]), potentially exacerbating pathogen transmission risk.We combined...
Authors
Nathaniel D. Rayl, Jerod Merkle, Kelly Proffitt, E. S. Almberg, Jennifer D. Jones, Justin Gude, Paul C. Cross
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