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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42768

Individual return patterns of spawning flannelmouth sucker (Catostomus latipinnis) to a desert river tributary Individual return patterns of spawning flannelmouth sucker (Catostomus latipinnis) to a desert river tributary

Tributaries provide temporal and spatial habitat heterogeneity in river networks that can be critical for parts of the life history of a species. Tributary fidelity can benefit individual fish undergoing spawning migrations by reducing time and energy spent exploring new areas and leveraging previous experience, but anthropogenic activities that fragment or degrade these systems can...
Authors
Sophia Marie Bonjour, Keith B. Gido, Charles N. Cathcart, Mark C. McKinstry

A strategic and science-based framework for management of invasive annual grasses in the sagebrush biome A strategic and science-based framework for management of invasive annual grasses in the sagebrush biome

In the last 20 years, the North American sagebrush biome has lost over 500,000 ha of intact and largely intact sagebrush plant communities on an annual basis. Much of this loss has been associated with expansion and infilling of invasive annual grasses (IAGs). These species are highly competitive against native perennial grasses in disturbed environments, and create fuel conditions that...
Authors
Chad S. Boyd, Megan K. Creutzburg, Alexander V. Kumar, Joseph T. Smith, Kevin E. Doherty, Brian A. Mealor, John B. Bradford, Matthew Cahill, Stella M. Copeland, Cameron A. Duquette, Lindy Garner, Martin C. Holdrege, Bill Sparklin, Todd B. Cross

Effect of invasive plant removal on the density of Peromyscus sonoriensis (western deer mice) in Point Reyes National Seashore, California, USA. Effect of invasive plant removal on the density of Peromyscus sonoriensis (western deer mice) in Point Reyes National Seashore, California, USA.

Non-native plants can affect communities through direct competition, and by providing refuge to seed predators, creating apparent competition with native plants. Ammophila arenaria (European beachgrass) has been introduced to coastal dune habitats throughout the western United States where it forms dense monocultures, stabilizes dunes, and alters abiotic and biotic conditions. The...
Authors
Jonathan P. Rose, Lorraine S Parsons, Patrick M. Kleeman, Brian J. Halstead

Standard data management practices Standard data management practices

No abstract available.
Authors
Rebecca Krogman, Jennifer M. Bayer, Arthur Cooper, Jeff Kopaska, Nancy J. Leonard, Jeremy Pritt, Colleen Roe, Erin Tracy, Paul A. Venturelli, Daniel J. Wieferich, Dana M. Infante

Warmwater fish in rivers Warmwater fish in rivers

In addition to the gears described in the previous version, this edition includes an updated water body definition that is inclusive of Mexico and Canada as well as standard methods for the use of cast nets in warmwater rivers. There were organizational changes in the trawling and hoop-net sections to make them consistent with the format for this edition, but the methods themselves have...
Authors
Brenda M. Pracheil, Patrick Braaten, Everardo Barba Macias, Christopher S. Guy, David P Herzog, Martin J. Hamel, John C Justice, Alison R Loeppky, Jon M Mollish, Jeffrey W Simmons, Sara J. Tripp

Developing a predictive model to identify Sea Lamprey parasitism on Lake Trout using biologgers Developing a predictive model to identify Sea Lamprey parasitism on Lake Trout using biologgers

Objective Sea Lamprey Petromyzon marinus remain problematic for Lake Trout Salvelinus namaycush restoration in the Laurentian Great Lakes. Fisheries assessments would benefit from knowledge of spatial–temporal patterns of Sea Lamprey parasitism on Lake Trout; however, such patterns are challenging to estimate from wounding rates on caught Lake Trout. Electronic tags have been used to...
Authors
Connor Reeve, Jean V. Adams, Scott M. Miehls, Michael R. Lowe, Steven J. Cooke, Mary L. Moser, Jake W. Brownscombe

Evaluating the sagebrush conservation design through the lens of a sagebrush indicator species Evaluating the sagebrush conservation design through the lens of a sagebrush indicator species

Sagebrush ecosystems support a suite of unique species such as the emblematic greater sage-grouse (Centrocercus urophasianus; sage-grouse) but are under increasing pressure from anthropogenic stressors such as annual grass invasion, conifer encroachment, altered wildfire regimes, and land use change. We examined the ability of an ecosystem-based framework for sagebrush conservation, the...
Authors
Brian G. Prochazka, Carl Gregory Lundblad, Kevin E. Doherty, Shawn T. O’Neil, John C. Tull, Steve C. Abele, Cameron L. Aldridge, Peter S. Coates

In vitro impacts of glyphosate on manatee lymphocytes In vitro impacts of glyphosate on manatee lymphocytes

Exposure to contaminants, such as the herbicide glyphosate, can suppress protective immune functions. Glyphosate is the herbicide most used worldwide and has been found in the plasma of more than 50 % of the Florida manatees (Trichechus manatus latirostris) and all-year-round in their aquatic environment. Our objectives were to analyze the consequences of glyphosate exposure on their...
Authors
Maite De Maria, Natalia Garcia-Reyero, Nicole I. Stacy, Jeffrey R. Abbott, Fahong Yu, Ruyiu Pu, Kevin J. Kroll, Francisco R. Barboza, Michael T. Walsh, Juan G. Perez-Jimenez, David A. Moraga Amador, Margaret Hunter, Nancy D. Denslow

Assessing mosquito populations to limit the spread of avian disease and inform the conservation of Hawaiian forest birds Assessing mosquito populations to limit the spread of avian disease and inform the conservation of Hawaiian forest birds

The introduced mosquito-borne avian malaria, Plasmodium relictum, along with its mosquito vector, Culex quinquefasciatus, are key limiting factors for endemic Hawaiian forest birds and are, in part, responsible for past extinctions and continued population declines of extant species. In the last 10 years steep declines in forest bird populations have been documented on Kaua`i and Maui...
Authors
Dennis Lapointe

Forest bird population status on Saipan, a small oceanic island Forest bird population status on Saipan, a small oceanic island

Tropical oceanic islands are critical biodiversity hotspots where population monitoring can help to determine the status and trends of rare and endangered species. Saipan is the second largest island in the Mariana Islands and contains many endemic and range-restricted bird species. Surveys of forest birds were conducted on Saipan using point-transect distance sampling, starting in 1982...
Authors
Trevor Bak, Steve Mullin, Emilie Kohler, Bradley A. Eichelberger, Richard J. Camp

Distribution of yellow crazy ants (Anoplolepis gracilipes) and notes on other ant species at Wake Atoll, 6-21 October, 2023 Distribution of yellow crazy ants (Anoplolepis gracilipes) and notes on other ant species at Wake Atoll, 6-21 October, 2023

Wake Atoll, located in the central Pacific Ocean, is a tropical coral atoll comprised of three islands totaling 696 ha of emergent land. Wake Atoll supports at least 17 species of non-native ants, but one species, the yellow crazy ant (Anoplolepis gracilipes), is especially harmful to ecosystems, including seabirds, which are federally protected species and nest throughout Wake Atoll...
Authors
Sheldon M. Plentovich, Robert W. Peck, Elyse Sachs

Early detection of wildlife disease pathogens using CRISPR-Cas system methods Early detection of wildlife disease pathogens using CRISPR-Cas system methods

Wildlife diseases are a considerable threat to human health, conservation, and the economy. Surveillance is a critical component to mitigate the impact of animal diseases in these sectors. To monitor human diseases, CRISPR-Cas (clustered regularly interspaced short palindromic repeats-CRISPR-associated protein) biosensors have proven instrumental as diagnostic tools capable of detecting...
Authors
Adam Alberto Perez, Guelaguetza Vazquez-Meves, Margaret Hunter
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