Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42712
Importance of scale, land cover, and weather on the abundance of bird species in a managed forest Importance of scale, land cover, and weather on the abundance of bird species in a managed forest
Climate change and habitat loss are projected to be the two greatest drivers of biodiversity loss over the coming century. While public lands have the potential to increase regional resilience of bird populations to these threats, long-term data are necessary to document species responses to changes in climate and habitat to better understand population vulnerabilities. We used...
Authors
Alexis R. Grinde, Gerald J. Hiemi, Brian R. Sturtevant, Hannah Panci, Wayne E. Thogmartin, Peter Wolter
Genetic composition and connectivity of the Antillean manatee (Trichechus manatus manatus) in Panama Genetic composition and connectivity of the Antillean manatee (Trichechus manatus manatus) in Panama
Genetic diversity and haplotype composition of the West Indian manatee (Trichechus manatus) population from the San San Pond Sak wetland in Bocas del Toro, Panama was studied using a segment of mitochondrial DNA (D’loop). No genetic information has been published to date for Panamanian populations. Due to the secretive behavior and small population size of the species in the area, DNA...
Authors
Edgardo Diaz-Ferguson, Margaret Hunter, Hector M. Guzman
States and rates: Complementary approaches to developing flow‐ecology relationships States and rates: Complementary approaches to developing flow‐ecology relationships
In recognition of the influence of flow on riverine habitats and organisms, stream ecologists have devoted considerable effort to the development of quantitative predictive relationships describing ecological responses to flow variability, i.e. flow‐ecology relationships.Methods used to generate flow‐ecology relationships can be thought of as a continuum bookended by pure states...
Authors
Kit Wheeler, Seth J. Wenger, Mary Freeman
Semi-quantitative assessment of disease risks at the human, livestock, wildlife interface for the Republic of Korea using a nationwide survey of experts: A model for other countries Semi-quantitative assessment of disease risks at the human, livestock, wildlife interface for the Republic of Korea using a nationwide survey of experts: A model for other countries
Wildlife-associated diseases and pathogens have increased in importance; however, management of a large number of diseases and diversity of hosts is prohibitively expensive. Thus, the determination of priority wildlife pathogens and risk factors for disease emergence is warranted. We used an online questionnaire survey to assess release and exposure risks, and consequences of wildlife...
Authors
Jusun Hwang, Kyunglee Lee, Daniel P. Walsh, SangWha Kim, Jonathan M. Sleeman, Hang Lee
Burrow dusting or oral vaccination prevents plague-associated prairie dog colony collapse Burrow dusting or oral vaccination prevents plague-associated prairie dog colony collapse
Plague impacts prairie dogs (Cynomys spp.), the endangered black-footed ferret (Mustela nigripes) and other sensitive wildlife species. We compared efficacy of prophylactic treatments (burrow dusting with deltamethrin or oral vaccination with recombinant “sylvatic plague vaccine” [RCN-F1/V307]) to placebo treatment in black-tailed prairie dog (C. ludovicianus) colonies. Between 2013 and...
Authors
Daniel W. Tripp, Tonie E. Rocke, Jonathan P. Runge, Rachel C. Abbott, Michael W. Miller
An evaluation of the efficacy of using environmental DNA (eDNA) to detect giant gartersnakes (Thamnophis gigas) An evaluation of the efficacy of using environmental DNA (eDNA) to detect giant gartersnakes (Thamnophis gigas)
Detecting populations of rare or cryptic species is essential for their conservation. For species like giant gartersnakes (Thamnophis gigas), conventional survey methods can be expensive and inefficient. These sampling difficulties might be overcome by modern techniques that detect deoxyribonucleic acid (DNA) shed by organisms into the environment (eDNA). We evaluated the efficacy of...
Authors
Brian J. Halstead, Dustin A. Wood, Lizabeth Bowen, Shannon C. Waters-Dynes, Amy G. Vandergast, Julia S. Ersan, Shannon M. Skalos, Michael L. Casazza
Riparian plant composition along hydrologic gradients in a dryland river basin and implications for a warming climate Riparian plant composition along hydrologic gradients in a dryland river basin and implications for a warming climate
Droughts in dryland regions on all continents are expected to increase in severity and duration under future climate projections. In dryland regions, it is likely that minimum streamflow will decrease with some perennial streams shifting to intermittent flow under climate-driven changes in precipitation and runoff and increases in temperature. Decreasing base flow and shifting flow...
Authors
Lindsay Reynolds, Patrick B. Shafroth
Minimizing effects of methodological decisions on interpretation and prediction in species distribution studies: An example with background selection Minimizing effects of methodological decisions on interpretation and prediction in species distribution studies: An example with background selection
Evaluating the conditions where a species can persist is an important question in ecology both to understand tolerances of organisms and to predict distributions across landscapes. Presence data combined with background or pseudo-absence locations are commonly used with species distribution modeling to develop these relationships. However, there is not a standard method to generate...
Authors
Catherine S. Jarnevich, Marian Talbert, Jeffrey T. Morisette, Cameron L. Aldridge, Cynthia Brown, Sunil Kumar, Daniel J. Manier, Colin Talbert, Tracy R. Holcombe
Response: The geographic distribution of Ixodes scapularis (Acari: Ixodidae) revisited: The importance of assumptions about error balance Response: The geographic distribution of Ixodes scapularis (Acari: Ixodidae) revisited: The importance of assumptions about error balance
No abstract available.
Authors
Micah Hahn, Catherine S. Jarnevich, Andrew J. Monaghan, Rebecca J. Eisen
Refining the cheatgrass–fire cycle in the Great Basin: Precipitation timing and fine fuel composition predict wildfire trends Refining the cheatgrass–fire cycle in the Great Basin: Precipitation timing and fine fuel composition predict wildfire trends
Larger, more frequent wildfires in arid and semi-arid ecosystems have been associated with invasion by non-native annual grasses, yet a complete understanding of fine fuel development and subsequent wildfire trends is lacking. We investigated the complex relationships among weather, fine fuels, and fire in the Great Basin, USA. We first modeled the annual and time-lagged effects of...
Authors
David S. Pilliod, Justin L. Welty, Robert Arkle
USGS microbiome research USGS microbiome research
Microbiomes are the communities of microorganisms (for example, bacteria, viruses, and fungi) that live on, in, and around people, plants, animals, soil, water, and the atmosphere. Microbiomes are active in the functioning of diverse ecosystems, for instance, by influencing water quality, nutrient acquisition
and stress tolerance in plants, and stability of soil and aquatic environments
Authors
Christina A. Kellogg, M. Camille Hopkins
Introduced American Bullfrog distribution and diets in Grand Teton National Park Introduced American Bullfrog distribution and diets in Grand Teton National Park
Introduced American Bullfrogs (Lithobates catesbeianus) have been present in Grand Teton National Park since approximately the 1950s, but little is known about their distribution and potential impacts. In this study, we surveyed the current bullfrog distribution and spatial overlap with sympatric native amphibians in the park, and characterized post-metamorphic bullfrog diets from July –...
Authors
Lauren M Flynn, Tess Marie Kreofsky, Adam J. Sepulveda