Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42702
Envisioning, quantifying, and managing thermal regimes on river networks Envisioning, quantifying, and managing thermal regimes on river networks
Water temperatures fluctuate in time and space, creating diverse thermal regimes on river networks. Temporal variability in these thermal landscapes has important biological and ecological consequences because of nonlinearities in physiological reactions; spatial diversity in thermal landscapes provides aquatic organisms with options to maximize growth and survival. However, human...
Authors
E. Ashley Steel, Timothy J. Beechie, Christian E. Torgersen, Aimee H. Fullerton
Ecological change drives a decline in mercury concentrations in southern Beaufort Sea polar bears Ecological change drives a decline in mercury concentrations in southern Beaufort Sea polar bears
We evaluated total mercury (THg) concentrations and trends in polar bears from the southern Beaufort Sea subpopulation from 2004 to 2011. Hair THg concentrations ranged widely among individuals from 0.6 to 13.3 μg g–1 dry weight (mean: 3.5 ± 0.2 μg g–1). Concentrations differed among sex and age classes: solitary adult females ≈ adult females with cubs ≈ subadults > adult males ≈...
Authors
Melissa A. McKinney, Todd C. Atwood, Sara Pedro, Elizabeth L. Peacock
Is motivation important to brook trout passage through culverts? Is motivation important to brook trout passage through culverts?
Culverts can restrict movement of stream-dwelling fish. Motivation to enter and ascend these structures is an essential precursor for successful passage. However, motivation is challenging to quantify. Here, we use attempt rate to assess motivation of 447 brook trout (Salvelinus fontinalis) entering three culverts under a range of hydraulic, environmental, and biological conditions. A...
Authors
Elsa Goerig, Theodore R. Castro-Santos
Can wolves help save Japan's mountain forests? Can wolves help save Japan's mountain forests?
Japan’s wolves were extinct by 1905. Today Japan's mountain forests are being killed by overabundant sika deer and wild boars. Since the early 1990s, the Japan Wolf Association has proposed wolf reintroduction to Japan to restore rural ecology and to return a culturally important animal. In this article I discuss whether the return of wolves could help save Japan's mountain forests.
Authors
Shannon Barber-Meyer
Guidelines for evaluation and treatment of lead poisoning of wild raptors Guidelines for evaluation and treatment of lead poisoning of wild raptors
Lead poisoning is a threat to birds, particularly scavenging birds of prey. With the availability of portable lead-testing kits, an increasing number of field researchers are testing wild-caught birds, in situ, for lead poisoning. We describe guidelines for evaluation of lead toxicity in wild raptors by outlining field testing of blood-lead concentrations, presenting criteria for...
Authors
Jesse A. Fallon, Patrick Redig, Tricia A. Miller, Michael J. Lanzone, Todd E. Katzner
Aerodynamic roughness length estimation with lidar and imaging spectroscopy in a shrub-dominated dryland Aerodynamic roughness length estimation with lidar and imaging spectroscopy in a shrub-dominated dryland
The aerodynamic roughness length (Z0 m) serves an important role in the flux exchange between the land surface and atmosphere. In this study, airborne lidar (ALS), terrestrial lidar (TLS), and imaging spectroscopy data were integrated to develop and test two approaches to estimate Z0 m over a shrub dominated dryland study area in south-central Idaho, USA. Sensitivity of the two...
Authors
Aihua Li, Wenguang Zhao, Jessica J Mitchell, Nancy F. Glenn, Matthew J. Germino, Joel B. Sankey, Richard M. Allen
Western bats as a reservoir of novel Streptomyces species with antifungal activity Western bats as a reservoir of novel Streptomyces species with antifungal activity
At least two-thirds of commercial antibiotics today are derived from Actinobacteria, more specifically from the genus Streptomyces. Antibiotic resistance and new emerging diseases pose great challenges in the field of microbiology. Cave systems, in which actinobacteria are ubiquitous and abundant, represent new opportunities for the discovery of novel bacterial species and the study of...
Authors
Paris S. Hamm, Nicole A. Caimi, Diana E. Northup, Ernest W. Valdez, Debbie C. Buecher, Christopher A. Dunlap, David P. Labeda, Shiloh Lueschow, Andrea Porras-Alfaro
A multistate dynamic site occupancy model for spatially aggregated sessile communities A multistate dynamic site occupancy model for spatially aggregated sessile communities
Estimation of transition probabilities of sessile communities seems easy in principle but may still be difficult in practice because resampling error (i.e. a failure to resample exactly the same location at fixed points) may cause significant estimation bias. Previous studies have developed novel analytical methods to correct for this estimation bias. However, they did not consider the...
Authors
Keiichi Fukaya, J. Andrew Royle, Takehiro Okuda, Masahiro Nakaoka, Takashi Noda
Evaluating species-specific changes in hydrologic regimes: an iterative approach for salmonids in the Greater Yellowstone Area (USA) Evaluating species-specific changes in hydrologic regimes: an iterative approach for salmonids in the Greater Yellowstone Area (USA)
Despite the importance of hydrologic regimes to the phenology, demography, and abundance of fishes such as salmonids, there have been surprisingly few syntheses that holistically assess regional, species-specific trends in hydrologic regimes within a framework of climate change. Here, we consider hydrologic regimes within the Greater Yellowstone Area in the Rocky Mountains of western...
Authors
Robert K. Al-Chokhachy, Adam J. Sepulveda, Andrew M. Ray, David P. Thoma, Michael T. Tercek
Quantile regression of microgeographic variation in population characteristics of an invasive vertebrate predator Quantile regression of microgeographic variation in population characteristics of an invasive vertebrate predator
Localized ecological conditions have the potential to induce variation in population characteristics such as size distributions and body conditions. The ability to generalize the influence of ecological characteristics on such population traits may be particularly meaningful when those traits influence prospects for successful management interventions. To characterize variability in...
Authors
Shane R. Siers, Julie A. Savidge, Robert Reed
Global synthesis of the documented and projected effects of climate change on inland fishes Global synthesis of the documented and projected effects of climate change on inland fishes
Although climate change is an important factor affecting inland fishes globally, a comprehensive review of how climate change has impacted and will continue to impact inland fishes worldwide does not currently exist. We conducted an extensive, systematic primary literature review to identify English-language, peer-reviewed journal publications with projected and documented examples of...
Authors
Bonnie Myers, Abigail Lynch, David B. Bunnell, Cindy Chu, Jeffrey A. Falke, Ryan Kovach, Trevor J. Krabbenhoft, Thomas J. Kwak, Craig P. Paukert
Seasonal movements of the Short-eared Owl (Asio flammeus) in western North America as revealed by satellite telemetry Seasonal movements of the Short-eared Owl (Asio flammeus) in western North America as revealed by satellite telemetry
The Short-eared Owl (Asio flammeus) is a widespread raptor whose abundance and distribution fluctuates in response to the varying amplitudes of its prey, which are predominately microtines. Previous efforts to describe the seasonal movements of Short-eared Owls have been hindered by few band recoveries and the species' cryptic and irruptive behavior. We attached satellite transmitters to...
Authors
James A. Johnson, Travis L. Booms, Lucas H. DeCicco, David C. Douglas