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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 43300

Shift in piscivory by salmonids following invasion of a minnow in an oligotrophic reservoir Shift in piscivory by salmonids following invasion of a minnow in an oligotrophic reservoir

Predation can play an important role in structuring ecological communities, and predator–prey dynamics can be altered following the introduction of new species. An unauthorized introduction of redside shiner (Richardsonius balteatus) into reservoirs in the Upper Skagit River, Washington, USA created concern that a consequent shift in predator–prey dynamics in the reservoirs could reduce
Authors
Rachelle Carina Johnson, Marshal S. Hoy, Karl D. Stenberg, Jonathan H Mclean, Benjamin Lorenz Jensen, Tessa Julianne Code, Carl O. Ostberg, David Beauchamp

Electrocution (avian) case definition for wildlife Electrocution (avian) case definition for wildlife

Diagnostic laboratories receive carcasses and samples for diagnostic evaluation and pathogen/toxin detection. Case definitions bring clarity and consistency to the evaluation process. Their use within and between organizations allows more uniform reporting of diseases and etiologic agents. The intent of a case definition is to provide scientifically based criteria for determining (a) if...
Authors
Julia S. Lankton, Laura Bourque, Bridget B. Baker, Jane Parmley

Ophidiomycosis (snake fungal disease) case definition for wildlife Ophidiomycosis (snake fungal disease) case definition for wildlife

Diagnostic laboratories receive carcasses and samples for diagnostic evaluation and pathogen/toxin detection. Case definitions bring clarity and consistency to the evaluation process. Their use within and between organizations allows more uniform reporting of diseases and etiologic agents. The intent of a case definition is to provide scientifically based criteria for determining (a) if...
Authors
Julia S. Lankton, Brian Stevens, Lenny Shirose, Christina Davy

Avian botulism case definition for wildlife Avian botulism case definition for wildlife

Diagnostic laboratories receive carcasses and samples for diagnostic evaluation and pathogen/toxin detection. Case definitions bring clarity and consistency to the evaluation process. Their use within and between organizations allows more uniform reporting of diseases and etiologic agents. The intent of a case definition is to provide scientifically based criteria for determining (a) if...
Authors
Julia S. Lankton, Brian Stevens

[Disease/condition] case definition [template] for wildlife [Disease/condition] case definition [template] for wildlife

Diagnostic laboratories receive carcasses and samples for diagnostic evaluation and pathogen/toxin detection. Case definitions bring clarity and consistency to the evaluation process. Their use within and between organizations allows more uniform reporting of diseases and etiologic agents. The intent of a case definition is to provide scientifically based criteria for determining (a) if...
Authors
Kimberli J.G. Miller, E. Jane Parmley, Anne Ballmann, Jennifer Buckner, Megan Jones, Julia S. Lankton, Marnie Zimmer, Emily Lankau

Case definitions for wildlife diseases Case definitions for wildlife diseases

Welcome to the first manual of “Case Definitions for Wildlife Diseases,” a “living” electronic publication. The plan is to add and update this manual’s case definitions periodically as warranted; thus, this manual will never be completed, and readers should download the latest versions of specific chapters (that is, definitions) when available. Constructive suggestions from readers are...
Authors
Kimberli J.G. Miller, E. Jane Parmley, Anne Ballmann, Jennifer Buckner, Megan Jones, Julia S. Lankton, Marnie Zimmer

Yosemite toad (Anaxyrus canorus) transcriptome reveals interplay between speciation genes and adaptive introgression Yosemite toad (Anaxyrus canorus) transcriptome reveals interplay between speciation genes and adaptive introgression

Genomes are heterogeneous during the early stages of speciation, with small ‘islands’ of DNA appearing to reflect strong adaptive differences, surrounded by vast seas of relative homogeneity. As species diverge, secondary contact zones between them can act as an interface and selectively filter through advantageous alleles of hybrid origin. Such introgression is another important...
Authors
Paul A. Maier, Amy G. Vandergast, Andrew J. Bohonak

Annotated bibliography of scientific research relevant to oil and gas reclamation best management practices in the western United States, published from 1969 through 2020 Annotated bibliography of scientific research relevant to oil and gas reclamation best management practices in the western United States, published from 1969 through 2020

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey has created a series of annotated bibliographies on topics of management concern for lands in...
Authors
Rebecca K. Mann, Molly L. McCormick, Seth M. Munson, Hillary F. Cooper, Lee C. Bryant, Jared K. Swenson, Laura A. Johnston, Savannah L. Wilson, Michael C. Duniway

Climatic variability as a principal driver of primary production in the southernmost subalpine Rocky Mountain lake Climatic variability as a principal driver of primary production in the southernmost subalpine Rocky Mountain lake

Mountain lakes are sensitive indicators of anthropogenically driven global change, with lake sediment records documenting increased primary production during the twentieth century. Atmospheric nutrient deposition and warming have been attributed to changes in other Western mountain lakes, however, the intensity of these drivers varies. We analyzed a sediment core representing a 270-year...
Authors
Anna Shampain, Jill Baron, Peter R. Leavitt, Sarah A. Spaulding

Estimating multivariate ecological variables at high spatial resolution using a cost-effective matching algorithm Estimating multivariate ecological variables at high spatial resolution using a cost-effective matching algorithm

Simulation models are valuable tools for estimating ecosystem response to environmental conditions and are particularly relevant for investigating climate change impacts. However, because of high computational requirements, models are often applied over a coarse grid of points or for representative locations. Spatial interpolation of model output can be necessary to guide decision-making...
Authors
Rachel R. Renne, Daniel Rodolphe Schlaepfer, Kyle A. Palmquist, William K. Lauenroth, John B. Bradford

Morphometry, growth, and condition of hatchery-reared Cisco (Coregonus artedi) and Bloater (Coregonus hoyi) Morphometry, growth, and condition of hatchery-reared Cisco (Coregonus artedi) and Bloater (Coregonus hoyi)

The re-introduction of native species that have been extirpated or in low abundance in the Great Lakes has been a binational initiative between the United States and Canadian governments. Recently, new management programs have been underway that use current hatchery facilities for the restoration of native forage fishes in Lake Ontario. These species include Bloater (Coregonus hoyi)...
Authors
Marc Chalupnicki, Gregg Mackey, James E. McKenna, James H. Johnson, H. George Ketola
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