Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 43466
Efficacy of increased visual and olfactory cues for luring and trapping invasive tegu lizards Efficacy of increased visual and olfactory cues for luring and trapping invasive tegu lizards
Controlling invasive wildlife species relies on the ability to efficiently remove individuals from the invaded environment. Thus, maximizing capture potential is of high interest, particularly for species that are difficult to capture. For invasive species such as the Argentine black and white tegu lizard (Salvator merianae), increasing attraction to traps could increase the probability...
Authors
Amanda Marie Kissel, Kevin L. Donmoyer, Mark Robert Sandfoss, James C. Howard, Christina M. Romagosa, Amy A. Yackel Adams
Living with wildfire in Lake County, Colorado: 2023 Data report Living with wildfire in Lake County, Colorado: 2023 Data report
Homeowner wildfire risk mitigation and preparedness are important components of community wildfire readiness. This report describes the data collected through two efforts conducted in the Lake County, Colorado, study area: (1) parcel-level rapid wildfire risk assessments performed by trained assessors and (2) homeowner surveys in which respondents provided self-assessments of their...
Authors
Colleen Donovan, Hannah Brenkert-Smith, Suzanne Wittenbrink, Patricia A. Champ, J. T. Shaver, Dave McCann, Christine Taniguchi, James R. Meldrum, Christopher M. Barth, Carolyn Wagner, Josh Kuehn
Adapting wildfire risk assessment for a Tribal landscape: Mount Baldy and the Fort Apache Reservation in Arizona Adapting wildfire risk assessment for a Tribal landscape: Mount Baldy and the Fort Apache Reservation in Arizona
Context
Authors
Aaron Daniel Russell, Todd J. Hawbaker, Doreen Ethelbah-Gatewood, Lucas S. Bair, Amanda Renee Carlson, James R. Meldrum, Seth M. Munson
Living with wildfire in Cooper Landing, Kenai Peninsula Borough, Alaska: 2023 data report Living with wildfire in Cooper Landing, Kenai Peninsula Borough, Alaska: 2023 data report
Homeowner wildfire risk mitigation and preparedness are important components of community wildfire readiness. This report describes the data collected through two efforts conducted in the Cooper Landing, Alaska, study area: (1) parcel-level rapid wildfire risk assessments performed by trained assessors and (2) homeowner surveys in which respondents provided self-assessments of their...
Authors
Colleen Donovan, Suzanne Wittenbrink, Hannah Brenkert-Smith, Josh Kuehn, Tim Weekley, Patricia A. Champ, Christopher M. Barth, James R. Meldrum, Carolyn Wagner, Christine Taniguchi
Living with wildfire in Nikiski, Kenai Peninsula Borough, Alaska: 2023 Data report Living with wildfire in Nikiski, Kenai Peninsula Borough, Alaska: 2023 Data report
Homeowner wildfire risk mitigation and preparedness are important components of community wildfire readiness. This report describes the data collected through two efforts conducted in the Nikiski, Alaska, study area: (1) parcel-level rapid wildfire risk assessments performed by trained assessors and (2) homeowner surveys in which respondents provided self-assessments of their parcel...
Authors
Colleen Donovan, Suzanne Wittenbrink, Hannah Brenkert-Smith, Josh Kuehn, Brenda Ahlberg, Patricia A. Champ, Christopher M. Barth, James R. Meldrum, Carolyn Wagner, Christine Taniguchi
Hyperspectral retrieval of phytoplankton absorption and community composition from NASA’s PACE-OCI in estuarine–coastal waters using a hybrid framework combining mixture-of-experts and Variational Autoencoder Hyperspectral retrieval of phytoplankton absorption and community composition from NASA’s PACE-OCI in estuarine–coastal waters using a hybrid framework combining mixture-of-experts and Variational Autoencoder
Retrieving the phytoplankton absorption coefficient (aphy; m−1), one of the most spectrally rich inherent optical properties, remains challenging in optically complex coastal waters worldwide. Leveraging NASA's new hyperspectral mission, PACE, we introduce Hyper-MoE-VAE, a deep-learning architecture that integrates a Mixture-of-Experts with a Variational Autoencoder to retrieve high...
Authors
Xingyu Bai, Bingqing Liu, Jiang Li, Yuanheng Xiong, Eurico J. D'Sa, Melissa Millman Baustian, Xiaodong Zhang, Brice K. Grunert, Chisom O. Emeghiebo, Cassie Glasspie, Xu Yuan
Effects of temperature on ectothermic predators are modulated by warming-induced changes to prey Effects of temperature on ectothermic predators are modulated by warming-induced changes to prey
Global temperature increases can fundamentally alter ecosystems through myriad pathways including by impacting top predators, whose movement, behavior, and trophic interactions often shape the structure of food webs and associated ecosystem processes. Forecasting how ectothermic predators will respond to climate change currently relies heavily on quantifying the direct impacts of...
Authors
Eric Arthur Scholl, Theodore Kennedy, Michael J. Dodrill, Morgan Ford, Robert E. Zuellig, Daren M. Carlisle, Daniel Nelson, Justin F. Pomeranz, Dan A. Kowalski, Charles B. Yackulic
Bird guilds exhibit varied responses to floodplain forest restoration in the Colorado River delta, Mexico Bird guilds exhibit varied responses to floodplain forest restoration in the Colorado River delta, Mexico
Grouping species into guilds can be useful to inform management decisions locally and at broader scales because guilds lack species-specificity. We investigated the response of five breeding bird guilds to riparian habitat restoration in the arid Colorado River delta, based on two decades of bird detections (2002–2021) at 230 bird count stations across 7 routes in actively revegetated (...
Authors
Eduardo González-Sargas, Timothy D. Meehan, Osvel Hinojosa-Huerta, Stefanny Villagomez-Palma, Christopher Dodge, Martha Gómez-Sapiens, Pamela L. Nagler, Patrick B. Shafroth
RoadxStr user’s guide—For collection of road-stream crossing assessment field observations RoadxStr user’s guide—For collection of road-stream crossing assessment field observations
Intersections of drainage networks and road networks represent a critical nexus between natural waterways and human infrastructure. Managing these systems involves decisions related to management of infrastructure, hydrologic and geomorphic processes, and ecological connectivity. Interactions among these systems influence multiple values, including the intactness of transportation...
Authors
Emily Heaston, Sean Winter, Shelby Bauer, Tait Ronningen, Jason Dunham
Short-term estuarine phytoplankton dynamics in response to hurricanes along the Gulf Coast of America: A Variational Autoencoder (VAE) approach with satellite and bio-optical observations Short-term estuarine phytoplankton dynamics in response to hurricanes along the Gulf Coast of America: A Variational Autoencoder (VAE) approach with satellite and bio-optical observations
Hurricanes drive diverse estuarine phytoplankton responses and can trigger cascading ecological and physicochemical impacts. Capturing these short-term dynamics requires high spatiotemporal resolution. Here, we applied a globally-applicable coastal ocean color algorithm, Variational Autoencoder (VAE), to Sentinel-2 MSI imagery for chlorophyll-a (Chl-a) estimation and validated its strong
Authors
Jiang Li, Bingqing Liu, Jiadong Lou, Xu Yuan, Eurico J. D'Sa, Melissa Millman Baustian, Megan La Peyre, Angelina Freeman, Vitor S. Martins, Emad Habib
PFAS in our food: From farms and fields to streams and shores PFAS in our food: From farms and fields to streams and shores
The concern of per- and polyfluoroalkyl substances (PFAS) contamination has historically focused on drinking water, but communities and researchers are increasingly realizing that drinking water may not be the only important exposure pathway. PFAS move through surface water, sediments and soils into groundwater, wildlife and even our agricultural systems. Consequently, they affect the...
Authors
Oindrila Ghosh, Jonathan Petali, Erin L. Pulster, Christopher J. McCarthy
A chromosome-level genome assembly of a vernal pool specialist amphibian, the Western Spadefoot, Spea hammondii A chromosome-level genome assembly of a vernal pool specialist amphibian, the Western Spadefoot, Spea hammondii
We assembled and annotated a chromosome-level reference genome for the Western Spadefoot, Spea hammondii (Anura, Scaphiopodidae) representing one of only three amphibians included in the California Conservation Genomics Project (CCGP). Spea hammondii is a vernal pool breeding anuran native to California and northwestern Baja California which has undergone both range contractions and...
Authors
Ben Thompsky, Eric Beraut, Robert D. Cooper, Merly Escalona, Robert E. Espinoza, Robert N. Fisher, Courtney Miller, Oanh Nguyen, Samuel Sacco, Ruta Sahasrabudhe, William E. Seligmann, Erin Tofflemier, Ian J. Wang, H. Bradley Schaffer