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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42876

Applying the resist-accept-direct (RAD) framework to wildlife health management Applying the resist-accept-direct (RAD) framework to wildlife health management

Wildlife diseases can have substantial impacts on wildlife populations as well as on human and domestic animal health and well-being. Although many agencies and stakeholders share a goal of supporting wildlife health, reducing wildlife disease burden is complicated by a scarcity of effective interventions for wildlife, competition for funds, and conflicting priorities. As a result...
Authors
Wynne Emily Moss, Gregor W. Schuurman, Emily S. Almberg, Danielle Buttke, Nathan L. Galloway, Samantha E.J. Gibbs, Anne Hubbs, Katherine Richgels, C. LeAnn White, Paul C. Cross

Expanding national-scale wildlife disease surveillance systems with research networks Expanding national-scale wildlife disease surveillance systems with research networks

Efficient learning about disease dynamics in free-ranging wildlife systems can benefit from active surveillance that is standardized across different ecological contexts. For example, active surveillance that targets specific individuals and populations with standardized sampling across ecological contexts (landscape-scale targeted surveillance) is important for developing a mechanistic
Authors
Kim M. Pepin, Matthew A. Combs, Guillaume Bastille-Rousseau, M.E. Craft, Paul C. Cross, M.A. Diuk-Wasser, R.B. Gagne, Travis Gallo, Tyler Garwood, J.D. Heale, J. Hewitt, J. Hoy-Petersen, Jennifer L. Malmberg, Jennifer M. Mullinax, L. Plimpton, Lauren Smith, M.C. VanAcker, J.C. Chandler, W. David Walter, Grete WIlson-Henjum, George Wittemyer, Kezia R. Manlove

Targeted quantitation of 6ppd-quinone in fish tissue samples with liquid chromatography-tandem mass spectrometry Targeted quantitation of 6ppd-quinone in fish tissue samples with liquid chromatography-tandem mass spectrometry

The tire additive transformation product N-(1,3-dimethylbutyl)-N’-phenyl-p-phenylenediamine-quinone (6PPD-quinone) has recently garnered global attention due to its acute toxicity to some salmonids, such as coho salmon (Oncorhynchus kisutch), and its ubiquitous presence in urban stormwater systems. In the present study, we developed and compared the extraction efficiency of two sample...
Authors
Adam H. Moody, David J. Soucek, David A. Alvarez

Human perturbations to mercury in global rivers Human perturbations to mercury in global rivers

Mercury compounds are potent neurotoxins that pose threats to human health, primarily through fish consumption. Rivers, critical for drinking water and food supply, have seen rapid increases in mercury concentrations and export to coastal margins since the Industrial Revolution (~1850). However, patterns of these changes remain understudied, limiting assessments of environmental policies...
Authors
Dong Peng, Zeli Tan, Tengfei Yuan, Peipei Wu, Zhengcheng Song, Peng Zhang, Shaojian Huang, Yanxu Zhang, Ting Lei, Beth Middleton, Jeroen E. Sonke, Guangchun Lei, Jianhua Gao

Population growth of threatened Gulf Sturgeon may be limited by the frequency of adult episodic mortality events Population growth of threatened Gulf Sturgeon may be limited by the frequency of adult episodic mortality events

Objective We identified spatial and temporal variation in population trends for Gulf Sturgeon Acipenser desotoi (previously known as Acipenser oxyrinchus desotoi) across the species’ range to inform recovery strategies. We also assessed whether adult survival or recruitment more strongly influences population change.Methods We analyzed adult Gulf Sturgeon capture–recapture data from 1990...
Authors
Stephen W. Parker, William E. Pine, Brian D. Healy, James E. Hines

Estimating disease prevalence from preferentially sampled, pooled data Estimating disease prevalence from preferentially sampled, pooled data

After the onset of the COVID-19 pandemic, scientific interest in coronaviruses endemic in animal populations has increased dramatically. However, investigating the prevalence of disease in animal populations across the landscape, which requires finding and capturing animals can be difficult. Spatial random sampling over a grid could be extremely inefficient because animals can be hard to...
Authors
Clinton P. Pollock, Andrew Hoegh, Kathryn Irvine, Luz de Wit, Brian E. Reichert

Distribution, abundance, and breeding activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2024 annual report Distribution, abundance, and breeding activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2024 annual report

Executive Summary The purpose of this report is to provide the Marine Corps with an annual summary of the distribution, abundance, and breeding activity of the endangered Southwestern Willow Flycatcher (Empidonax traillii extimus; flycatcher) at Marine Corps Base Camp Pendleton (MCBCP or “Base”). Surveys for the flycatcher were conducted on Base between May 8 and July 24, 2024. All of...
Authors
Scarlett L. Howell, Barbara E. Kus

Expanding barriers: Impassable gaps interior to distribution of an isolated mountain-dwelling species Expanding barriers: Impassable gaps interior to distribution of an isolated mountain-dwelling species

Global change is expected to expand and shrink species' distributions in complex ways beyond just retraction at warm edges and expansion at cool ones. Detecting these changes is complicated by the need for robust baseline data for comparison. For instance, gaps in species' distributions may reflect long-standing patterns, recent shifts, or merely insufficient sampling effort. We...
Authors
Erik A. Beever, Adam B. Smith, David H. Wright, Tom Rickman, Francis D. Gerraty, Joseph A.E. Stewart, Alisha M. Gill, Kelly Klingler, Megan M. Robinson

Status and trends of forest bird populations at Hakalau Forest National Wildlife Refuge, 1987–2024 Status and trends of forest bird populations at Hakalau Forest National Wildlife Refuge, 1987–2024

Since 1985, the Hakalau Forest Unit of the Big Island National Wildlife Refuge Complex (hereafter, Hakalau) has protected the largest endemic forest bird diversity in the State of Hawaii. This includes three endangered and one threatened species and their habitats. Hakalau’s vast area (155 km2), mostly high elevation (>1500 m) montane forest, provides refuge from avian malaria...
Authors
Noah Hunt, Steve Kendall, Trevor Bak, Richard J. Camp

Challenges and priorities for climate-informed invasive species management across multiple scales Challenges and priorities for climate-informed invasive species management across multiple scales

In recent decades, substantial evidence has accumulated regarding the effects of climate change on the establishment, spread, and impact of invasive species. While the importance of incorporating climate change into invasive species management and policy is increasingly recognized, practitioner experiences and perspectives are often overlooked. Consequently, invasive species research may...
Authors
A.E. Evans, L. Brewington, Carrie Jean Brown-Lima, E. Fusco, R.M. Gregg, D. Lieurance, Elliott W. Parsons, R.C. Nagy, Lindsey Thurman, Toni Lyn Morelli

Concentration dependency of PFOS bioaccumulation by freshwater benthic algae Concentration dependency of PFOS bioaccumulation by freshwater benthic algae

Although perfluorooctanesulfonic acid (PFOS) has been voluntarily phased out, it remains the most abundant and frequently detected PFAS compound in biota worldwide. A deeper understanding of how PFOS enters the aquatic food web at the energetic base is needed to better characterize and predict the general patterns of PFAS trophic transfer. Research on bioaccumulation by primary producers...
Authors
Alison M. Zachritz, Jeffery A. Steevens, Daniele A. Miranda, Brittany G. Perrotta, Rebecca A. Dorman, Heather D. Whitehead, Erin L. Pulster, David Walters, David J. Soucek, Graham F. Peaslee, Gary A. Lamberti

Quantifying the substantive influence of public comment on United States federal environmental decisions under NEPA Quantifying the substantive influence of public comment on United States federal environmental decisions under NEPA

A citizen’s right to comment on, and criticize, government decisions makes a difference. The U.S. National Environmental Policy Act of 1969 (NEPA) institutionalized public engagement in environmental review in the belief it would lead to better decisions and more sustainable outcomes. But, 50 years later, NEPA’s public comment process has been criticized as costly and slow, while doing...
Authors
Ashley Stava, Wayne E. Thogmartin, Robert Merideth, Steven Bethard, Faiz Currim, Jonathan J. Derbridge, Kirk Emerson, Egoitz Laparra, Aaron M. Lien, Emily McGovern, Justin Pidot, Marc Miller, Krista Romero-Carvenas, Blaze Smith, Carly Winnebald, Laura Lopez-Hoffman
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