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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42710

The flathead catfish invasion of the Great Lakes The flathead catfish invasion of the Great Lakes

A detailed review of historical literature and museum data revealed that flathead catfish were not historically native in the Great Lakes Basin, with the possible exception of a relict population in Lake Erie. The species has invaded Lake Erie, Lake St. Clair, Lake Huron, nearly all drainages in Michigan, and the Fox/Wolf and Milwaukee drainages in Wisconsin. They have not been collected...
Authors
Pamela L. Fuller, Gary Whelan

An update on Toxoplasma gondii infections in northern sea otters (Enhydra lutris kenyoni) from Washington State, USA An update on Toxoplasma gondii infections in northern sea otters (Enhydra lutris kenyoni) from Washington State, USA

Toxoplasmosis in marine mammals is epidemiologically and clinically important. Toxoplasma gondii antibodies (by modified agglutination test, cut-off ≥1:25) were detected in serum of 65 of 70 (92.9%) northern sea otters (Enhydra lutris kenyoni) from Washington State, USA. Brains and/or muscles of 44 sea otters were bioassayed in mice (INF-γ knock-out [KO], Swiss Webster outbred [SW]) and...
Authors
Shiv K. Verma, Susan Knowles, Camila K. Cerqueira-Cezar, Oliver C. Kwok, Tiantian Jiang, Chunlei Su, Jitender P. Dubey

Implicit decision framing as an unrecognized source of confusion in endangered species classification Implicit decision framing as an unrecognized source of confusion in endangered species classification

Legal classification of species requires scientific and values‐based components, and how those components interact depends on how people frame the decision. Is classification a negotiation of trade‐offs, a decision on how to allocate conservation efforts, or simply a comparison of the biological status of a species to a legal standard? The answers to problem‐framing questions such as...
Authors
Jonathan Cummings, Sarah J. Converse, David R. Smith, Steve Morey, Michael C. Runge

Reestablishing a host–affiliate relationship: Migratory fish reintroduction increases native mussel recruitment Reestablishing a host–affiliate relationship: Migratory fish reintroduction increases native mussel recruitment

Co‐extirpation among host–affiliate species is thought to be a leading cause of biodiversity loss worldwide. Freshwater mussels (Unionida) are at risk globally and face many threats to survival, including limited access to viable host fish required to complete their life history. We examine the relationship between the common eastern elliptio mussel (Elliptio complanata) and its...
Authors
Heather S. Galbraith, Julie L. Devers, Carrie J. Blakeslee, Jeffrey C. Cole, Barbara St. John White, Steven Minkkinen, William A. Lellis

Evaluating anthropogenic landscape alterations as wildlife hazards, with wind farms as an example Evaluating anthropogenic landscape alterations as wildlife hazards, with wind farms as an example

Anthropogenic alterations to landscape are indicators of potential compromise of that landscape’s ecology. We describe how alterations can be assessed as ‘hazards’ to wildlife through a sequence of three steps: diagnosing the means by which the hazard acts on individual organisms at risk; estimating the fitness cost of the hazard to those individuals and the rate at which that cost...
Authors
Peter R. Law, Mark R. Fuller

Bat community response to silvicultural treatments in bottomland hardwood forests managed for wildlife in the Mississippi Alluvial Valley Bat community response to silvicultural treatments in bottomland hardwood forests managed for wildlife in the Mississippi Alluvial Valley

Silvicultural treatments (e.g., selective timber harvests) that are prescribed to promote wildlife habitat are intended to alter the physical structure of forests to achieve conditions deemed beneficial for wildlife. Such treatments have been advocated for management of bottomland hardwood forests on public conservation lands in the Mississippi Alluvial Valley. Although some songbirds...
Authors
Loraine P. Ketzler, Christopher E. Comer, Daniel J. Twedt

Importance of riparian forest corridors for the ocelot in agricultural landscapes Importance of riparian forest corridors for the ocelot in agricultural landscapes

Worldwide, private lands have attracted increased attention from conservationists, not only because most of the globe is privately owned, but also because private lands can be an asset to the protected area conservation strategy. In Brazil, the riverine Areas of Permanent Protection (APPs) is a key instrument of the Forest Code to protect native vegetation on private lands. Although APPs...
Authors
Roberta Paolino, Andy Royle, Natalia Versiani, Thiago F. Rodrigues, Nielson Pasqualotto, Victor Krepschi, Adriano Chiarello

On the reliability of N‐mixture models for count data On the reliability of N‐mixture models for count data

N‐mixture models describe count data replicated in time and across sites in terms of abundance N and detectability p. They are popular because they allow inference about N while controlling for factors that influence p without the need for marking animals. Using a capture–recapture perspective, we show that the loss of information that results from not marking animals is critical, making...
Authors
Richard J. Barker, Matthew J. Schofield, William A. Link, John R. Sauer

Juvenile salmonid monitoring following removal of Condit Dam in the White Salmon River Watershed, Washington, 2017 Juvenile salmonid monitoring following removal of Condit Dam in the White Salmon River Watershed, Washington, 2017

Condit Dam, at river kilometer 5.3 on the White Salmon River, Washington, was breached in 2011, and removed completely in 2012, providing anadromous salmonids with the opportunity to recolonize habitat blocked for nearly 100 years. Prior to dam removal, a multi-agency workgroup concluded that the preferred salmonid restoration alternative was to allow natural recolonization. Monitoring...
Authors
Ian G. Jezorek, Jill M. Hardiman

“Asian carp” is societally and scientifically problematic. Let's replace it “Asian carp” is societally and scientifically problematic. Let's replace it

Bighead Carp Hypophthalmichthys nobilis, Black Carp Mylopharyngodon piceus, Grass Carp Ctenopharyngodon idella, and Silver Carp H. molitrix are considered invasive species in North America and Europe. In North America, they are typically referred to collectively as “Asian carp”, a reference to their native range. The category “Asian carp” fails to acknowledge the cultural value and the...
Authors
Patrick Kocovsky, Duane Chapman, Song S. Qian

Variation in inbreeding rates across the range of Northern Spotted Owls (Strix occidentalis caurina): Insights from over 30 years of monitoring data Variation in inbreeding rates across the range of Northern Spotted Owls (Strix occidentalis caurina): Insights from over 30 years of monitoring data

Inbreeding has been difficult to quantify in wild populations because of incomplete parentage information. We applied and extended a recently developed framework for addressing this problem to infer inbreeding rates in Northern Spotted Owls (Strix occidentalis caurina) across the Pacific Northwest, USA. Using pedigrees from 14,187 Northern Spotted Owls, we inferred inbreeding rates for...
Authors
Mark P. Miller, Susan M. Haig, Eric D. Forsman, Robert G. Anthony, Lowell Diller, Katie M. Dugger, Alan B. Franklin, Tracy L. Fleming, Scott Gremel, Damon B. Lesmeister, Mark Higley, Dale R. Herter, Stan G Sovern

Modeling framework to estimate spawning and hatching locations of pelagically-spawned eggs Modeling framework to estimate spawning and hatching locations of pelagically-spawned eggs

Identifying spawning and hatching locations is vital to controlling invasive fish and conserving imperiled fish, which can be difficult for pelagically-spawning species with semi-buoyant eggs. In freshwater systems, this reproductive strategy is common among cyprinid species, such as Chinese carp species currently threatening the Great Lakes. Following the confirmation that one of these...
Authors
Holly S. Embke, Patrick Kocovsky, Tatiana Garcia, Christine M. Mayer, Song S. Qian
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