Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42702
Spatial capture–recapture with partial identity: An application to camera traps Spatial capture–recapture with partial identity: An application to camera traps
Camera trapping surveys frequently capture individuals whose identity is only known from a single flank. The most widely used methods for incorporating these partial identity individuals into density analyses discard some of the partial identity capture histories, reducing precision, and, while not previously recognized, introducing bias. Here, we present the spatial partial identity...
Authors
Ben C. Augustine, J. Andrew Royle, Marcella J. Kelly, Christopher B. Satter, Robert S. Alonso, Erin E. Boydston, Kevin R. Crooks
Inferred fish behavior its implications for hydroacoustic surveys in nearshore habitats Inferred fish behavior its implications for hydroacoustic surveys in nearshore habitats
Population availability and vessel avoidance effects on hydroacoustic abundance estimates may be scale dependent; therefore, it is important to evaluate these biases across systems. We performed an inter-ship comparison survey to determine the effect of vessel size, day-night period, depth, and environmental gradients on walleye (Sander vitreus) density estimates in Lake Erie, an...
Authors
Mark R. DuFour, Christine M. Mayer, Song S. Qian, Christopher Vandergoot, Richard T. Kraus, Patrick Kocovsky, David M. Warner
Evaluation of acoustic telemetry grids for determining aquatic animal movement and survival Evaluation of acoustic telemetry grids for determining aquatic animal movement and survival
Acoustic telemetry studies have frequently prioritized linear configurations of hydrophone receivers, such as perpendicular from shorelines or across rivers, to detect the presence of tagged aquatic animals. This approach introduces unknown bias when receivers are stationed for convenience at geographic bottlenecks (e.g., at the mouth of an embayment or between islands) as opposed to...
Authors
Richard T. Kraus, Christopher Holbrook, Christopher Vandergoot, Taylor R. Stewart, Matthew D. Faust, Douglas A. Watkinson, Colin Charles, Mark Pegg, Eva C. Enders, Charles C. Krueger
Raptor interactions with wind energy: Case studies from around the world Raptor interactions with wind energy: Case studies from around the world
The global potential for wind power generation is vast, and the number of installations is increasing rapidly. We review case studies from around the world of the effects on raptors of wind-energy development. Collision mortality, displacement, and habitat loss have the potential to cause population-level effects, especially for species that are rare or endangered. The impact on raptors...
Authors
Richard T. Watson, Patrick S. Kolar, Miguel Ferrer, Torgeir Nygard, Naira Johnston, W. Grainger Hunt, Hanneline A. Smit-Robinson, Christopher J Farmer, Manuela M. Huso, Todd E. Katzner
Avian predator buffers against variability in marine habitats with flexible foraging behavior Avian predator buffers against variability in marine habitats with flexible foraging behavior
How well seabirds compensate for variability in prey abundance and composition near their breeding colonies influences their distribution and reproductive success. We used tufted puffins (Fratercula cirrhata) as forage fish samplers to study marine food webs from the western Aleutian Islands (53°N, 173°E) to Kodiak Island (57°N, 153°W), Alaska, during August 2012–2014. Around each colony...
Authors
Sarah K. Schoen, John F. Piatt, Mayumi L. Arimitsu, Brielle Heflin, Erica N. Madison, Gary S. Drew, Martin Renner, Nora A. Rojek, David C. Douglas, Anthony R. DeGange
Fungal disease prevention in seedlings of rice (Oryza sativa) and other grasses by growth-promoting seed-associated endophytic bacteria from invasive Phragmites australis Fungal disease prevention in seedlings of rice (Oryza sativa) and other grasses by growth-promoting seed-associated endophytic bacteria from invasive Phragmites australis
Non-cultivated plants carry microbial endophytes that may be used to enhance development and disease resistance of crop species where growth-promoting and protective microbes may have been lost. During seedling establishment, seedlings may be infected by several fungal pathogens that are seed or soil borne. Several species of Fusarium, Pythium and other water moulds cause seed rots...
Authors
Satish Kumar Verma, Kathryn L. Kingsley, Marshall S. Bergen, Kurt P. Kowalski, James F. White
Context-dependent interactions and the regulation of species richness in freshwater fish Context-dependent interactions and the regulation of species richness in freshwater fish
Species richness is regulated by a complex network of scale-dependent processes. This complexity can obscure the influence of limiting species interactions, making it difficult to determine if abiotic or biotic drivers are more predominant regulators of richness. Using integrative modeling of freshwater fish richness from 721 lakes along an 11olatitudinal gradient, we find negative...
Authors
Andrew S. MacDougall, Eric Harvey, Jenny L. McCune, Karin A. Nilsson, Joseph Bennett, Jennifer Firn, Timothy Bartley, James B. Grace, Jocelyn Kelly, Tyler D. Tunney, Bailey C. McMeans, Shin-Ichiro S. Matsuzaki, Taku Kadoya, Ellen Esch, Kevin Cazelles, Nigel Lester, Kevin S. McCann
Energetic solutions of Rock Sandpipers to harsh winter conditions rely on prey quality Energetic solutions of Rock Sandpipers to harsh winter conditions rely on prey quality
Rock Sandpipers Calidris ptilocnemis have the most northerly non-breeding distribution of any shorebird in the Pacific Basin (upper Cook Inlet, Alaska; 61°N, 151°W). In terms of freezing temperatures, persistent winds and pervasive ice, this site is the harshest used by shorebirds during winter. We integrated physiological, metabolic, behavioural and environmental aspects of the non...
Authors
Daniel R. Ruthrauff, Anne Dekinga, Robert E. Gill, Theunis Piersma
Long-term assessment of ichthyoplankton in a large North American river system reveals changes in fish community dynamics Long-term assessment of ichthyoplankton in a large North American river system reveals changes in fish community dynamics
Larval fishes are sensitive to abiotic conditions and provide a direct measure of spawning success. The St. Clair – Detroit River System, a Laurentian Great Lakes connecting channel with a history of environmental degradation, has undergone improvements in habitat and water quality since the 1970s. We compared 2006–2015 ichthyoplankton community data with those collected prior to...
Authors
Taaja R. Tucker, Edward F. Roseman, Robin L. DeBruyne, Jeremy J. Pritt, David Bennion, Darryl W. Hondorp, James C. Boase
Changes in freshwater mussel communities linked to legacy pollution in the Lower Delaware River Changes in freshwater mussel communities linked to legacy pollution in the Lower Delaware River
Freshwater mussels are among the most-imperiled organisms worldwide, although they provide a variety of important functions in the streams and rivers they inhabit. Among Atlantic-slope rivers, the Delaware River is known for its freshwater mussel diversity and biomass; however, limited data are available on the freshwater mussel fauna in the lower, non-tidal portion of the river. This...
Authors
Carrie J. Blakeslee, Erik L. Silldorff, Heather S. Galbraith
Effects of sediment application on Nyssa aquatica and Taxodium distichum saplings Effects of sediment application on Nyssa aquatica and Taxodium distichum saplings
The decline of Taxodium distichum forests along the Gulf Coast of North America is partly due to elevation loss and subsequent flooding. In many coastal wetlands, a common approach for coastal restoration is to rebuild elevation through the application of dredge material, but this technique has not been used widely in coastal forests due to concerns of negatively impacting trees. This...
Authors
Isabel Grandy, Linda Messina, Evelyn R. Anemaet, Beth A. Middleton
Biological and ecological science for Wisconsin—A Great Lakes and Rivers State Biological and ecological science for Wisconsin—A Great Lakes and Rivers State
Wisconsin and natural resources go hand-in-hand. Tourism, which generates $19 billion annually and sustains about 200,000 jobs, depends on an abundance of lakes, rivers, shorelines, and woodlands for fishing, hunting, boating, and other outdoor recreation. Rivers and floodplains in the Upper Mississippi Basin, including the Mississippi River, are part of a five-State corridor that...
Authors