Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42712
Mathematical models for plant-herbivore interactions Mathematical models for plant-herbivore interactions
Mathematical Models of Plant-Herbivore Interactions addresses mathematical models in the study of practical questions in ecology, particularly factors that affect herbivory, including plant defense, herbivore natural enemies, and adaptive herbivory, as well as the effects of these on plant community dynamics. The result of extensive research on the use of mathematical modeling to...
Authors
Zhilan Feng, Donald L. DeAngelis
Diel variation in detection and vocalization rates of king (Rallus elegans) and clapper (Rallus crepitans) rails in intracoastal waterways Diel variation in detection and vocalization rates of king (Rallus elegans) and clapper (Rallus crepitans) rails in intracoastal waterways
Surveys for secretive marsh birds could be improved with refinements to address regional and species-specific variation in detection probabilities and optimal times of day to survey. Diel variation in relation to naïve occupancy, detection rates, and vocalization rates of King (Rallus elegans) and Clapper (R. crepitans) rails were studied in intracoastal waterways in Virginia, USA...
Authors
Lydia L. Stiffler, James T. Anderson, Amy B. Welsh, Sergio R. Harding, Gary R. Costanzo, Todd E. Katzner
Contact and contagion: Probability of transmission given contact varies with demographic state in bighorn sheep Contact and contagion: Probability of transmission given contact varies with demographic state in bighorn sheep
Understanding both contact and probability of transmission given contact are key to managing wildlife disease. However, wildlife disease research tends to focus on contact heterogeneity, in part because the probability of transmission given contact is notoriously difficult to measure. Here, we present a first step towards empirically investigating the probability of transmission given...
Authors
Kezia R. Manlove, E. Frances Cassirer, Raina K. Plowright, Paul C. Cross, Peter J. Hudson
Characterization of Monkeypox virus infection in African rope squirrels (Funisciurus sp.) Characterization of Monkeypox virus infection in African rope squirrels (Funisciurus sp.)
Monkeypox (MPX) is a zoonotic disease endemic in Central and West Africa and is caused by Monkeypox virus (MPXV), the most virulent Orthopoxvirus affecting humans since the eradication of Variola virus (VARV). Many aspects of the MPXV transmission cycle, including the natural host of the virus, remain unknown. African rope squirrels (Funisciurus spp.) are considered potential reservoirs...
Authors
Elizabeth Falendysz, Juan G. Lopera, Jeffrey B. Doty, Yoshinori J. Nakazawa, Colleen Crill, Faye Lorenzsonn, Lem’s N. Kalemba, Monica Ronderos, Andres Meija, Jean M. Malekani, Kevin L. Karem, Darrin Caroll, Jorge E. Osorio, Tonie E. Rocke
Lessons from the Tōhoku tsunami: A model for island avifauna conservation prioritization Lessons from the Tōhoku tsunami: A model for island avifauna conservation prioritization
Earthquake-generated tsunamis threaten coastal areas and low-lying islands with sudden flooding. Although human hazards and infrastructure damage have been well documented for tsunamis in recent decades, the effects on wildlife communities rarely have been quantified. We describe a tsunami that hit the world's largest remaining tropical seabird rookery and estimate the effects of sudden...
Authors
Michelle H. Reynolds, Paul Berkowitz, John Klavitter, Karen Courtot
Northern tamarisk beetle (Diorhabda carinulata) and tamarisk (Tamarix spp.) interactions in the Colorado River basin Northern tamarisk beetle (Diorhabda carinulata) and tamarisk (Tamarix spp.) interactions in the Colorado River basin
Northern tamarisk beetles (Diorhabda carinulata) were released in the Upper Colorado River Basin in the United States in 2004–2007 to defoliate introduced tamarisk shrubs (Tamarix spp.) in the region’s riparian zones. The primary purpose was to control the invasive shrub and reduce evapotranspiration (ET) by tamarisk in an attempt to increase stream flows. We evaluated beetle–tamarisk...
Authors
Pamela L. Nagler, Uyen Nguyen, Heather L. Bateman, Christopher Jarchow, Edward P. Glenn, William J. Waugh, Charles van Riper
Long-term dynamics and characteristics of snags created for wildlife habitat Long-term dynamics and characteristics of snags created for wildlife habitat
Snags provide essential habitat for numerous organisms and are therefore critical to the long-term maintenance of forest biodiversity. Resource managers often use snag creation to mitigate the purposeful removal of snags at the time of harvest, but information regarding how created snags change over long timescales (>20 y) is absent from the literature. In this study, we evaluated the...
Authors
Amy M. Barry, Joan Hagar, James W. Rivers
Logistic quantile regression provides improved estimates for bounded avian counts: A case study of California Spotted Owl fledgling production Logistic quantile regression provides improved estimates for bounded avian counts: A case study of California Spotted Owl fledgling production
Counts of avian fledglings, nestlings, or clutch size that are bounded below by zero and above by some small integer form a discrete random variable distribution that is not approximated well by conventional parametric count distributions such as the Poisson or negative binomial. We developed a logistic quantile regression model to provide estimates of the empirical conditional...
Authors
Brian S. Cade, Barry R. Noon, Rick D. Scherer, John J. Keane
Biological and ecological science for Florida—The Sunshine State Biological and ecological science for Florida—The Sunshine State
Florida is rich in sunshine and other natural resources essential to the State's economy. More than 100 million tourists visit Florida's beaches, wetlands, forests, oceans, lakes, and streams where they generate billions of dollars and sustain more than a million jobs. Florida also provides habitat for several thousand freshwater and marine fish, mammals, birds, and other wildlife that...
Authors
Water Resources Division U.S. Geological Survey
Simultaneous estimation of diet composition and calibration coefficients with fatty acid signature data Simultaneous estimation of diet composition and calibration coefficients with fatty acid signature data
Knowledge of animal diets provides essential insights into their life history and ecology, although diet estimation is challenging and remains an active area of research. Quantitative fatty acid signature analysis (QFASA) has become a popular method of estimating diet composition, especially for marine species. A primary assumption of QFASA is that constants called calibration...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann, Karyn D. Rode
Trophic structure of mesopelagic fishes in the Gulf of Mexico revealed by gut content and stable isotope analyses Trophic structure of mesopelagic fishes in the Gulf of Mexico revealed by gut content and stable isotope analyses
Mesopelagic fishes represent an important component of the marine food web due to their global distributions, high abundances and ability to transport organic material throughout a large part of the water column. This study combined stable isotope (SIAs) and gut content analyses (GCAs) to characterize the trophic structure of mesopelagic fishes in the North-Central Gulf of Mexico...
Authors
Jennifer P. McClain-Counts, Amanda W.J. Demopoulos, Steve W. Ross
Monitoring the southwestern Wyoming landscape—A foundation for management and science Monitoring the southwestern Wyoming landscape—A foundation for management and science
Natural resource monitoring involves repeated collections of resource condition data and analyses to detect possible changes and identify underlying causes of changes. For natural resource agencies, monitoring provides the foundation for management and science. Specifically, analyses of monitoring data allow managers to better understand effects of land-use and other changes on important...
Authors
Daniel J. Manier, Patrick J. Anderson, Timothy J. Assal, Geneva W. Chong, Cynthia P. Melcher