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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42871

Taxonomic revision of the South American catfish genus Ageneiosus (Siluriformes: Auchenipteridae) with the description of four new species Taxonomic revision of the South American catfish genus Ageneiosus (Siluriformes: Auchenipteridae) with the description of four new species

The catfish genus Ageneiosus in the exclusively Neotropical family Auchenipteridae is revised. Species of Ageneiosus are widely distributed in all major South American continental drainages except the São Francisco River basin and small rivers along the Brazilian east coast. The taxonomic revision was based on examination of available type specimens, additional museum material and...
Authors
Frank Ribeiro, Lucia H. Rapp Py-Daniel, Stephen J. Walsh

Pre-mining trace element and radiation exposure to biota from a breccia pipe uranium mine in the Grand Canyon (Arizona, USA) watershed Pre-mining trace element and radiation exposure to biota from a breccia pipe uranium mine in the Grand Canyon (Arizona, USA) watershed

The risks to wildlife and humans from uranium (U) mining in the Grand Canyon watershed are largely unknown. In addition to U, other co-occurring ore constituents contribute to risks to biological receptors depending on their toxicological profiles. This study characterizes the pre-mining concentrations of total arsenic (As), cadmium (Cd), copper (Cu), lead (Pb), mercury (Hg), nickel (Ni)...
Authors
Jo Ellen Hinck, Danielle M. Cleveland, William G. Brumbaugh, Greg Linder, Julia S. Lankton

Interaction of Francisella noatunensis subsp. orientalis with Oreochromis mossambicus bulbus arteriosus cell line Interaction of Francisella noatunensis subsp. orientalis with Oreochromis mossambicus bulbus arteriosus cell line

Francisella noatunensis subsp. orientalis (Fno) (syn. F. asiatica) is an emergent warmwater fish pathogen and the causative agent of piscine francisellosis. Although Fno causes septicemia and can live extracellularly in infected tilapia (Oreochromis spp.), the early interaction of Fno with vasculature endothelium is unknown. In the present study, we examined the interaction of wild-type...
Authors
Esteban Soto, Susan Yun, J. Lewis, Michael T. Kearney, John D. Hansen

Regional patterns of Mesozoic-Cenozoic magmatism in western Alaska revealed by new U-Pb and 40Ar/39Ar ages Regional patterns of Mesozoic-Cenozoic magmatism in western Alaska revealed by new U-Pb and 40Ar/39Ar ages

In support of regional geologic framework studies, we obtained 50 new argon-40/argon-39 (40Ar/39Ar) ages and 33 new uranium-lead (U-Pb) ages from igneous rocks of southwestern Alaska. Most of the samples are from the Sleetmute and Taylor Mountains quadrangles; smaller collections or individual samples are from the Bethel, Candle, Dillingham, Goodnews Bay, Holy Cross, Iditarod, Kantishna...
Authors
Dwight Bradley, Marti L. Miller, Richard M. Friedman, Paul W. Layer, Heather A. Bleick, James V. Jones, Steven E. Box, Susan M. Karl, Nora B. Shew, Timothy S. White, Alison B. Till, Julie A. Dumoulin, Thomas K. Bundtzen, Paul B. O'Sullivan, Thomas D. Ullrich

Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife

Comparative approaches in physiological genomics offer an opportunity to understand the functional importance of genes involved in niche exploitation. We used populations of Alewife (Alosa pseudoharengus) to explore the transcriptional mechanisms that underlie adaptation to fresh water. Ancestrally anadromous Alewives have recently formed multiple, independently derived, landlocked...
Authors
Jonathan P. Velotta, Jill L. Wegrzyn, Samuel Ginzburg, Lin Kang, Sergiusz J. Czesny, Rachel J. O’Neill, Stephen D. McCormick, Pawel Michalak, Eric T. Schultz

Walrus haul-out and in water activity levels relative to sea ice availability in the Chukchi Sea Walrus haul-out and in water activity levels relative to sea ice availability in the Chukchi Sea

An animal’s energetic costs are dependent on the amount of time it allocates to various behavioral activities. For Arctic pinnipeds, the time allocated to active and resting behaviors could change with future reductions in sea ice cover and longer periods of open water. The Pacific walrus (Odobenus rosmarus divergens) is a large Arctic pinniped that rests on sea ice or land between...
Authors
Chadwick V. Jay, Rebecca L. Taylor, Anthony S. Fischbach, Mark S. Udevitz, William S. Beatty

Low pathogenic avian influenza viruses in wild migratory waterfowl in a region of high poultry production, Delmarva, Maryland Low pathogenic avian influenza viruses in wild migratory waterfowl in a region of high poultry production, Delmarva, Maryland

Migratory waterfowl are natural reservoirs for low pathogenic avian influenza viruses (AIVs) and may contribute to the long-distance dispersal of these pathogens as well as spillover into domestic bird populations. Surveillance for AIVs is critical to assessing risks for potential spread of these viruses among wild and domestic bird populations. The Delmarva Peninsula on the east coast...
Authors
Diann J. Prosser, Christine L. Densmore, Larry J. Hindman, Deborah D. Iwanowicz, Christopher A. Ottinger, Luke R. Iwanowicz, Cindy P. Driscoll, Jessica L. Nagel

San Francisco Bay living shorelines: Restoring Eelgrass and Olympia Oysters for habitat and shore protection San Francisco Bay living shorelines: Restoring Eelgrass and Olympia Oysters for habitat and shore protection

Living shorelines projects utilize a suite of sediment stabilization and habitat restoration techniques to maintain or build the shoreline, while creating habitat for a variety of species, including invertebrates, fish, and birds (see National Oceanic and Atmospheric Administration [NOAA] 2015 for an overview). The term “living shorelines” denotes provision of living space and support...
Authors
Katharyn E. Boyer, Chela Zabin, Susan De La Cruz, Edwin D. Grosholz, Michelle Orr, Jeremy Lowe, Marilyn Latta, Jen Miller, Stephanie Kiriakopolos, Cassie Pinnell, Damien Kunz, Julien Moderan, Kevin Stockmann, Geana Ayala, Robert Abbott, Rena Obernolte

Using resilience and resistance concepts to manage persistent threats to sagebrush ecosystems and greater sage-grouse Using resilience and resistance concepts to manage persistent threats to sagebrush ecosystems and greater sage-grouse

Conservation of imperiled species often demands addressing a complex suite of threats that undermine species viability. Regulatory approaches, such as the US Endangered Species Act (1973), tend to focus on anthropogenic threats through adoption of policies and regulatory mechanisms. However, persistent ecosystem-based threats, such as invasive species and altered disturbance regimes...
Authors
Jeanne C. Chambers, Jeremy D. Maestas, David A. Pyke, Chad S. Boyd, Mike Pellant, Amarina Wuenschel

Northern bobwhite breeding season ecology on a reclaimed surface mine Northern bobwhite breeding season ecology on a reclaimed surface mine

Surface coal mining and subsequent reclamation of surface mines have converted large forest areas into early successional vegetative communities in the eastern United States. This reclamation can provide a novel opportunity to conserve northern bobwhite (Colinus virginianus). We evaluated the influence of habitat management activities on nest survival, nest-site selection, and brood...
Authors
Jarred M. Brooke, Evan P. Tanner, David C. Peters, Ashley M. Tanner, Craig A. Harper, Patrick D. Keyser, Joseph D. Clark, John J. Morgan

Current limitations and recommendations to improve testing for the environmental assessment of endocrine active substances Current limitations and recommendations to improve testing for the environmental assessment of endocrine active substances

In the present study, existing regulatory frameworks and test systems for assessing potential endocrine active chemicals are described, and associated challenges are discussed, along with proposed approaches to address these challenges. Regulatory frameworks vary somewhat across geographies, but all basically evaluate whether a chemical possesses endocrine activity and whether this...
Authors
Katherine K. Coady, Ronald C. Biever, Nancy D. Denslow, Melanie Gross, Patrick D. Guiney, Henrik Holbech, Natalie K. Karouna-Renier, Ioanna Katsiadaki, Hank Krueger, Steven L. Levine, Gerd Maack, Mike Williams, Jeffrey C. Wolf, Gerald T. Ankley

Mercury exposure may influence fluctuating asymmetry in waterbirds Mercury exposure may influence fluctuating asymmetry in waterbirds

Variation in avian bilateral symmetry can be an indicator of developmental instability in response to a variety of stressors, including environmental contaminants. The authors used composite measures of fluctuating asymmetry to examine the influence of mercury concentrations in 2 tissues on fluctuating asymmetry within 4 waterbird species. Fluctuating asymmetry increased with mercury
Authors
Garth Herring, Collin A. Eagles-Smith, Joshua T. Ackerman
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