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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42707

Isotopic structure of Lake Whitefish in Lake Huron: Evidence for regional and local populations based on resource use Isotopic structure of Lake Whitefish in Lake Huron: Evidence for regional and local populations based on resource use

Lake Whitefish Coregonus clupeaformis is the most commercially valuable species in Lake Huron. The fishery for this species has historically been managed based on 25 management units (17 in Canada, 8 in the USA). However, congruence between the contemporary population structure of Lake Whitefish and management units is poorly understood. We used stable isotopes of carbon (δ13C) and...
Authors
Rebecca L. Eberts, Bjorn Wissel, Gavin L. Simpson, Stephen S. Crawford, Wendylee Stott, Robert H. Hanner, Richard G. Manzon, Joanna Y. Wilson, Douglas R. Boreham, Christopher M. Somers

A comparison of honey bee-collected pollen from working agricultural lands using light microscopy and ITS metabarcoding A comparison of honey bee-collected pollen from working agricultural lands using light microscopy and ITS metabarcoding

Taxonomic identification of pollen has historically been accomplished via light microscopy but requires specialized knowledge and reference collections, particularly when identification to lower taxonomic levels is necessary. Recently, next-generation sequencing technology has been used as a cost-effective alternative for identifying bee-collected pollen; however, this novel approach has...
Authors
Matthew Smart, Robert S. Cornman, Deborah D. Iwanowicz, Margaret McDermott-Kubeczko, Jeff S Pettis, Marla S Spivak, Clint Otto

Editor’s note Editor’s note

Heavy metal contamination at shooting ranges is well documented (e.g., Heier et al. 2009; Islam et al. 2016). Primarily lead, but also copper, zinc, and antimony often occur at high concentrations in shooting range soils; cadmium, nickel, silver, and arsenic may also be present (Cao et al. 2003; Islam et al. 2016). These metals represent a potential threat to human health and wildlife...
Authors
Christopher J. Schmitt

Simulated mussel mortality thresholds as a function of mussel biomass and nutrient loading Simulated mussel mortality thresholds as a function of mussel biomass and nutrient loading

A freshwater “mussel mortality threshold” was explored as a function of porewater ammonium (NH4+) concentration, mussel biomass, and total nitrogen (N) utilizing a numerical model calibrated with data from mesocosms with and without mussels. A mortality threshold of 2 mg-N L−1 porewater NH4+ was selected based on a study that estimated 100% mortality of juvenile Lampsilis mussels exposed...
Authors
Jeremy S. Bril, Kathryn Langenfeld, Craig L. Just, Scott N. Spak, Teresa Newton

Prevalence and distribution of Wellfleet Bay virus exposure in the Common Eider (Somateria mollissima) Prevalence and distribution of Wellfleet Bay virus exposure in the Common Eider (Somateria mollissima)

Between 1998 and 2014, recurrent mortality events were reported in the Dresser's subspecies of the Common Eider (Somateria mollissima dresseri) on Cape Cod, Massachusetts, USA near Wellfleet Harbor. The early die-offs were attributed to parasitism and emaciation, but beginning in 2006 a suite of distinct lesions was observed concomitant with the isolation of a previously unknown RNA...
Authors
Jennifer R. Ballard, Randall M. Mickley, Samantha E.J. Gibbs, Chris P. Dwyer, Catherine Soos, N. Jane Harms, H. Grant Gilchrist, Jeffrey S. Hall, J. Christian Franson, G. Randy Milton, Glen Parsons, Brad Allen, Jean-Francois Giroux, Stephane Lair, Daniel G. Mead, John R. Fischer

A refined electrofishing technique for collecting Silver Carp: Implications for management A refined electrofishing technique for collecting Silver Carp: Implications for management

Detecting nuisance species at low abundance or in newly established areas is critical to developing pest management strategies. Due to their sensitivity to disturbance and erratic jumping behavior, Silver Carp Hypophthalmichthys molitrix can be difficult to collect with traditional sampling methods. We compared catch per unit effort (CPUE) of all species from a Long Term Resource...
Authors
Wesley W. Bouska, David C. Glover, Kristen L. Bouska, James E. Garvey

Susceptibility and antibody response of the laboratory model zebra finch (Taeniopygia guttata) to West Nile Virus Susceptibility and antibody response of the laboratory model zebra finch (Taeniopygia guttata) to West Nile Virus

Since the introduction of West Nile virus (WNV) into North America in 1999 a number of passerine bird species have been found to play a role in the amplification of the virus. Arbovirus surveillance, observational studies and experimental studies have implicated passerine birds (songbirds, e.g., crows, American robins, house sparrows, and house finches) as significant reservoirs of WNV...
Authors
Erik K. Hofmeister, Melissa Lund, Valerie I. Shearn-Bochsler, Christopher N. Balakrishnan

Estimating the settling velocity of bioclastic sediment using common grain-size analysis techniques Estimating the settling velocity of bioclastic sediment using common grain-size analysis techniques

Most techniques for estimating settling velocities of natural particles have been developed for siliciclastic sediments. Therefore, to understand how these techniques apply to bioclastic environments, measured settling velocities of bioclastic sedimentary deposits sampled from a nearshore fringing reef in Western Australia were compared with settling velocities calculated using results...
Authors
Michael V. W. Cuttler, Ryan J. Lowe, James L. Falter, Daniel D. Buscombe

Shallow water benthic imaging and substrate characterization using recreational-grade sidescan-sonar Shallow water benthic imaging and substrate characterization using recreational-grade sidescan-sonar

In recent years, lightweight, inexpensive, vessel-mounted ‘recreational grade’ sonar systems have rapidly grown in popularity among aquatic scientists, for swath imaging of benthic substrates. To promote an ongoing ‘democratization’ of acoustical imaging of shallow water environments, methods to carry out geometric and radiometric correction and georectification of sonar echograms are...
Authors
Daniel D. Buscombe

Climatic controls on the global distribution, abundance, and species richness of mangrove forests Climatic controls on the global distribution, abundance, and species richness of mangrove forests

Mangrove forests are highly productive tidal saline wetland ecosystems found along sheltered tropical and subtropical coasts. Ecologists have long assumed that climatic drivers (i.e., temperature and rainfall regimes) govern the global distribution, structure, and function of mangrove forests. However, data constraints have hindered the quantification of direct climate-mangrove linkages...
Authors
Michael J. Osland, Laura C. Feher, Kereen Griffith, Kyle C. Cavanaugh, Nicholas M. Enwright, Richard H. Day, Camille L. Stagg, Ken W. Krauss, Rebecca J. Howard, James B. Grace, Kerrylee Rogers

Pinyon and juniper encroachment into sagebrush ecosystems impacts distribution and survival of greater sage-grouse Pinyon and juniper encroachment into sagebrush ecosystems impacts distribution and survival of greater sage-grouse

In sagebrush (Artemisia spp.) ecosystems, encroachment of pinyon (Pinus spp.) and juniper (Juniperus spp.; hereafter, “pinyon-juniper”) trees has increased dramatically since European settlement. Understanding the impacts of this encroachment on behavioral decisions, distributions, and population dynamics of greater sage-grouse (Centrocercus urophasianus) and other sagebrush obligate...
Authors
Peter S. Coates, Brian G. Prochazka, Mark A. Ricca, K. Benjamin Gustafson, Pilar T. Ziegler, Michael L. Casazza

Forest restoration at Redwood National Park: Exploring prescribed fire alternatives to second-growth management: A case study Forest restoration at Redwood National Park: Exploring prescribed fire alternatives to second-growth management: A case study

Almost half of Redwood National Park is comprised of second-growth forests characterized by high stand density, deficient redwood composition, and low understory biodiversity. Typical structure of young redwood stands impedes the recovery of old-growth conditions, such as dominance of redwood (Sequoia sempervirens (D. Don) Endl.), distinct canopy layers and diverse understory vegetation...
Authors
Eamon Engber, Jason Teraoka, Phillip J. van Mantgem
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