Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42704
Development of a study design and implementation plan to estimate juvenile salmon survival in Lookout Point Reservoir and other reservoirs of the Willamette Project, western Oregon Development of a study design and implementation plan to estimate juvenile salmon survival in Lookout Point Reservoir and other reservoirs of the Willamette Project, western Oregon
Survival estimates for juvenile salmon and steelhead fry in reservoirs impounded by high head dams are coveted data by resource managers. However, this information is difficult to obtain because these fish are too small for tagging using conventional methods such as passive-integrated transponders or radio or acoustic transmitters. We developed a study design and implementation plan to...
Authors
Tobias J. Kock, Russell W. Perry, Fred R. Monzyk, Adam C. Pope, John M. Plumb
Survival of juvenile chinook salmon and coho salmon in the Roza Dam fish bypass and in downstream reaches of the Yakima River, Washington, 2016 Survival of juvenile chinook salmon and coho salmon in the Roza Dam fish bypass and in downstream reaches of the Yakima River, Washington, 2016
Estimates of juvenile salmon survival are important data for fishery managers in the Yakima River Basin. Radiotelemetry studies during 2012–14 showed that tagged juvenile Chinook salmon (Oncorhynchus tshawytscha) that passed through the fish bypass at Roza Dam had lower survival than fish that passed through other routes at the dam. That study also identified flow-survival relationships...
Authors
Tobias J. Kock, Russell W. Perry, Amy C. Hansen
Riparian spiders as sentinels of polychlorinated biphenyl contamination across heterogeneous aquatic ecosystems Riparian spiders as sentinels of polychlorinated biphenyl contamination across heterogeneous aquatic ecosystems
Riparian spiders are being used increasingly to track spatial patterns of contaminants in and fluxing from aquatic ecosystems.However, our understanding of the circumstances under which spiders are effective sentinels of aquatic pollution is limited. The present study tests the hypothesis that riparian spiders may be effectively used to track spatial patterns of sediment pollution by
Authors
Johanna M. Kraus, Polly P. Gibson, David M. Walters, Marc A. Mills
Assessment of dreissenid biodeposits as a potential food resource for invasive Asian carp Assessment of dreissenid biodeposits as a potential food resource for invasive Asian carp
Silver carp (Hypophthalmichthys molitrix) and bighead carp (H. nobilis) are poised to invade the Laurentian Great Lakes. Zebra mussels (Dreissena polymorpha) and quagga mussels (D. rostriformis bugensis) have shifted nutrient pathways towards the benthos, partly through deposition of feces and rejected food particles called biodeposits. When biodeposit material was fed to bighead and...
Authors
Karl R. Anderson, Duane Chapman, Cari-Ann Hayer
Hydrologic and geomorphic changes resulting from episodic glacial lake outburst floods: Rio Colonia, Patagonia, Chile Hydrologic and geomorphic changes resulting from episodic glacial lake outburst floods: Rio Colonia, Patagonia, Chile
Glacial lake outburst floods (GLOFs) are a prominent but poorly understood cryospheric hazard in a warming climate. We quantify the hydrologic and geomorphic response to 21 episodic GLOFs that began in April 2008 using multitemporal satellite imagery and field observations. Peak discharge exiting the source lake became progressively muted downstream. At ~40–60 km downstream, where the...
Authors
J. Jacquet, S.W. McCoy, Daniel Mcgrath, David Nimick, Mark Fahey, J. O’kuinghttons, B.A. Friesen, J. Leidich
Spatiotemporal patterns of duck nest density and predation risk: a multi-scale analysis of 18 years and more than 10,000 nests Spatiotemporal patterns of duck nest density and predation risk: a multi-scale analysis of 18 years and more than 10,000 nests
Many avian species are behaviorally-plastic in selecting nest sites, and may shift to new locations or habitats following an unsuccessful breeding attempt. If there is predictable spatial variation in predation risk, the process of many individuals using prior experience to adaptively change nest sites may scale up to create shifting patterns of nest density at a population level. We...
Authors
Kevin M. Ringelman, John M. Eadie, Joshua T. Ackerman, Andrew Sih, Daniel L. Loughman, Gregory S. Yarris, Shaun L. Oldenburger, M. Robert McLandress
Quantifying the effects of research band resighting activities on staging terns in comparison to other disturbances Quantifying the effects of research band resighting activities on staging terns in comparison to other disturbances
Avian research that involves potential disturbance to the study species may have unintended fitness consequences and could lead to biases in measurements of interest. The effects of band resighting on the behavior of mixed-species flocks of staging waterbirds were evaluated against recreational pedestrian activity that was expected to cause flushing. We found a model with additive...
Authors
Melissa Althouse, Jonathan B. Cohen, Jeffrey A. Spendelow, Sarah M. Karpanty, Kayla L. Davis, Katharine C. Parsons, Cristin F. Luttazi
Feline immunodeficiency virus cross-species transmission: Implications for emergence of new lentiviral infections Feline immunodeficiency virus cross-species transmission: Implications for emergence of new lentiviral infections
Owing to a complex history of host-parasite coevolution, lentiviruses exhibit a high degree of species specificity. Given the well-documented viral archeology of HIV emergence following human exposures to SIV, understanding processes that promote successful cross-species lentiviral transmissions is highly relevant. We have previously reported natural cross-species transmission of a...
Authors
Justin Lee, Jennifer L. Malmberg, Britta A. Wood, Sahaja Hladky, Ryan Troyer, Melody Roelke, Mark W. Cunningham, Roy McBride, Winston Vickers, Walter Boyce, Erin E. Boydston, Laurel E.K. Serieys, Seth P.D. Riley, Kevin R. Crooks, Sue VandeWoude
Space use and habitat selection by resident and transient red wolves (Canis rufus) Space use and habitat selection by resident and transient red wolves (Canis rufus)
Recovery of large carnivores remains a challenge because complex spatial dynamics that facilitate population persistence are poorly understood. In particular, recovery of the critically endangered red wolf (Canis rufus) has been challenging because of its vulnerability to extinction via human-caused mortality and hybridization with coyotes (Canis latrans). Therefore, understanding red...
Authors
Joseph W. Hinton, Christine Proctor, Marcella J. Kelly, Frank T. van Manen, Michael R. Vaughan, Michael J. Chamberlain
Active season microhabitat and vegetation selection by giant gartersnakes associated with a restored marsh in California Active season microhabitat and vegetation selection by giant gartersnakes associated with a restored marsh in California
Studies of habitat selection can reveal important patterns to guide habitat restoration and management for species of conservation concern. Giant gartersnakes Thamnophis gigas are endemic to the Central Valley of California, where >90% of their historical wetland habitat has been converted to agricultural and other uses. Information about the selection of habitats by individual giant...
Authors
Brian J. Halstead, Patricia Valcarcel, Glenn D. Wylie, Peter S. Coates, Michael L. Casazza, Daniel K. Rosenberg
Twitter predicts citation rates of ecological research Twitter predicts citation rates of ecological research
The relationship between traditional metrics of research impact (e.g., number of citations) and alternative metrics (altmetrics) such as Twitter activity are of great interest, but remain imprecisely quantified. We used generalized linear mixed modeling to estimate the relative effects of Twitter activity, journal impact factor, and time since publication on Web of Science citation rates...
Authors
Brandon K. Peoples, Stephen R. Midway, Dana K. Sackett, Abigail Lynch, Patrick B. Cooney
Migratory-stage sea lamprey Petromyzon marinus stop responding to conspecific damage-released alarm cues after 4 h of continuous exposure in laboratory conditions Migratory-stage sea lamprey Petromyzon marinus stop responding to conspecific damage-released alarm cues after 4 h of continuous exposure in laboratory conditions
This study investigated the length of avoidance response of migratory-stage sea lamprey Petromyzon marinus exposed continuously to conspecific damage-released alarm cues for varying lengths of time in laboratory stream channels. Ten replicate groups of P. marinus, separated by sex, were exposed to either deionized water control or to P. marinus extract for 0, 2 or 4 h continuously...
Authors
Istvan Imre, Richard T. Di Rocco, Haley McClure, Nicholas S. Johnson, Grant E. Brown