Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42702
Capturing potential: Leveraging grass carp behavior Ctenopharyngodon idella for enhanced removal Capturing potential: Leveraging grass carp behavior Ctenopharyngodon idella for enhanced removal
Effective management of invasive species benefits from a comprehensive understanding of the species’ behavior and interactions with the invaded system. We investigated temporal dynamics of telemetry detections and the potential utility of a traitor approach for informing response efforts to the invasive grass carp (Ctenopharyngodon idella) population in the Sandusky River, a major...
Authors
Matthew Ross Acre, Tyler Michael Hessler, Sophia Marie Bonjour, James Roberts, Scott F. Colborne, Travis O. Brenden, Lucas R. Nathan, Dustin Broaddus, Christopher S. Vandergoot, Christine M. Mayer, Song S. Qian, Robert D. Hunter, Ryan E. Brown, Robin D. Calfee
Multinational evaluation of genetic diversity indicators for the Kunming-Montreal Global Biodiversity Framework Multinational evaluation of genetic diversity indicators for the Kunming-Montreal Global Biodiversity Framework
Under the recently adopted Kunming-Montreal Global Biodiversity Framework, 196 Parties committed to reporting the status of genetic diversity for all species. To facilitate reporting, three genetic diversity indicators were developed, two of which focus on processes contributing to genetic diversity conservation: maintaining genetically distinct populations and ensuring populations are...
Authors
Alicia Mastretta-Yanes, Jessica M. da Silva, Catherine E. Grueber, Luis Castillo-Reina, Viktoria Koppa, Brenna R. Forester, W. Chris Funk, Myriam Heuertz, Fumiko Ishihama, Rebecca Jordan, Joachim Mergeay, Ivan Paz-Vinas, Victor Julio Rincon-Parra, Maria Alejandra Rodriguez-Morales, Libertad Arredondo-Amezcua, Gaelle Brahy, Matt DeSaix, Lily Durkee, Ashley Hamilton, Margaret E. Hunter, Austin Koontz, Iris Lang, Maria Camila Latorre-Cardenas, Tanya Latty, Alexander Llanes-Quevedo, Anna J. MacDonald, Meg Mahoney, Caitlin Miller, Juan Francisco Ornelas, Santiago Ramirez-Barahona, Erica Robertson, Isa-Rita M. Russo, Metztli Arcila Santiago, Robyn E. Shaw, Glenn M. Shea, Per Sjogren-Gulve, Emma Suzuki Spence, Taylor Stack, Sofia Suarez, Akio Takenaka, Henrik Thurfjell, Sheela P. Turbek, Marlien van der Merwe, Fleur Visser, Ana Wegier, Georgina Wood, Eugenia Zarza, Linda Laikre, Sean M. Hoban
Browsing the literature Browsing the literature
For this edition of Browsing the Literature, we have two new papers from Rangeland Ecology & Management, a series of basic ecology papers with an international scope from journals such as the Proceedings of the National Academy of Sciences (USA), Science, and Nature, and several papers advancing our understanding of drought and carbon at global scales. Additionally, several papers on...
Authors
Matthew J. Germino
Examining inequality in aquatic ecosystem services: Evidence from large-scale monitoring programs Examining inequality in aquatic ecosystem services: Evidence from large-scale monitoring programs
We hypothesize that aquatic ecosystem services are likely to be inequitably accessible and addressing this hypothesis requires systematic assessment at regional and national scales. We used existing data from large-scale aquatic monitoring programs (National Coastal Condition Assessment, National Lakes Assessment) to examine relationships between ecosystem condition, approximating a...
Authors
Katya E. Kovalenko, Sergey Ilyushkin, Holly Wellar-Kelly, Justine Annaliese Neville, Glenn R. Guntenspergen
Genome-wide association analysis of the resistance to infectious hematopoietic necrosis virus in two rainbow trout aquaculture lines confirms oligogenic architecture with several moderate effect quantitative trait loci Genome-wide association analysis of the resistance to infectious hematopoietic necrosis virus in two rainbow trout aquaculture lines confirms oligogenic architecture with several moderate effect quantitative trait loci
Infectious hematopoietic necrosis (IHN) is a disease of salmonid fish that is caused by the IHN virus (IHNV), which can cause substantial mortality and economic losses in rainbow trout aquaculture and fisheries enhancement hatchery programs. In a previous study on a commercial rainbow trout breeding line that has undergone selection, we found that genetic resistance to IHNV is controlled...
Authors
Yniv Palti, Roger L. Vallejo, Maureen K. Purcell, Guangtu Gao, Kristy L. Shewbridge, Roseanna L. Long, Christopher Setzke, Breno O. Fragomeni, Hao Cheng, Kyle E. Martin, Kerrry A. Naish
Biodiversity loss reduces global terrestrial carbon storage Biodiversity loss reduces global terrestrial carbon storage
Natural ecosystems store large amounts of carbon globally, as organisms absorb carbon from the atmosphere to build large, long-lasting, or slow-decaying structures such as tree bark or root systems. An ecosystem’s carbon sequestration potential is tightly linked to its biological diversity. Yet when considering future projections, many carbon sequestration models fail to account for the...
Authors
Sarah R. Weiskopf, Forest Isbell, Maria Isabel Arce-Plata, Moreno Di Marco, Mike Harfoot, Justin A. Johnson, Susannah B. Lerman, Brian W. Miller, Toni Lyn Morelli, Akira S. Mori, Ensheng Weng, Simon Ferrier
Illegal shooting of protected nongame birds along power lines coincides with places and times of peak legal recreational shooting Illegal shooting of protected nongame birds along power lines coincides with places and times of peak legal recreational shooting
Illegal killing of protected nongame birds is pervasive and can be demographically relevant. In 2021 and 2022, we evaluated spatial and temporal patterns in illegal killing of birds along 69.7 km of power lines in the Morley Nelson Snake River Birds of Prey National Conservation Area in Idaho, USA, to provide insight into potential drivers behind the activity and key information to...
Authors
Eve C. Thomason, James R. Belthoff, Sharon A. Poessel, Todd E. Katzner
Discovery and genomic characterization of a novel hepadnavirus from asymptomatic anadromous alewife (Alosa pseudoharengus) Discovery and genomic characterization of a novel hepadnavirus from asymptomatic anadromous alewife (Alosa pseudoharengus)
The alewife (Alosa pseudoharengus) is an anadromous herring that inhabits waters of northeastern North America. This prey species is a critical forage for piscivorous birds, mammals, and fishes in estuarine and oceanic ecosystems. During a discovery project tailored to identify potentially emerging pathogens of this species, we obtained the full genome of a novel hepadnavirus (ApHBV)...
Authors
Clayton D. Raines, Jan Lovy, Nicolas B.D. Phelps, Sunil Mor, Terry Ng, Luke R. Iwanowicz
Ecological dissimilarity matters more than geographical distance when predicting land surface indicators using machine learning Ecological dissimilarity matters more than geographical distance when predicting land surface indicators using machine learning
Supervised training techniques, such as those used in machine learning, use generally large sets of in situ data to train models that can, in turn, be used to make predictions (or prediction maps) about the Earth’s surface in times or places where no in situ data exist. The purpose of the present study is to investigate, using a very large set of in situ data from across the western...
Authors
Bo Zhou, Gregory S. Okin, Junzhe Zhang, Shannon L. Savage, Christopher J. Cole, Michael C. Duniway
Human-induced range expansions result in a recent hybrid zone between sister species of ducks Human-induced range expansions result in a recent hybrid zone between sister species of ducks
Landscapes are consistently under pressure from human-induced ecological change, often resulting in shifting species distributions. For some species, changing the geographical breadth of their niche space results in matching range shifts to regions other than those in which they are formally found. In this study, we employ a population genomics approach to assess potential conservation...
Authors
Philip Lavretsky, Kevin J. Kraai, David Butler, James Morel, Jay Alan VonBank, Joseph Marty, Vergie Musni, Daniel P. Collins
Quantifying intraspecific variation in host resistance ad tolerance to a lethal pathogen Quantifying intraspecific variation in host resistance ad tolerance to a lethal pathogen
Testing for intraspecific variation for host tolerance or resistance in wild populations is important for informing conservation decisions about captive breeding, translocation, and disease treatment. Here, we test the importance of tolerance and resistance in multiple populations of boreal toads (Anaxyrus boreas boreas) against Batrachochytrium dendrobatidis (Bd), the amphibian fungal...
Authors
B. Hardy, Erin L. Muths, W. C. Funk, L. L. Bailey
Chronic wasting disease alters the movement behavior and habitat use of mule deer during clinical stages of infection Chronic wasting disease alters the movement behavior and habitat use of mule deer during clinical stages of infection
Integrating host movement and pathogen data is a central issue in wildlife disease ecology that will allow for a better understanding of disease transmission. We examined how adult female mule deer (Odocoileus hemionus) responded behaviorally to infection with chronic wasting disease (CWD). We compared movement and habitat use of CWD-infected deer (n = 18) to those that succumbed to...
Authors
Gabriel M. Barrile, Paul C. Cross, Cheynne Stewart, Jennifer L. Malmberg, Rhiannon P. Jakopak, Justin Binfet, Kevin Montieth, Brandon Werner, Jessica Jennings-Gaines, JA Merkle