Due to a lapse in appropriations, the majority of USGS websites may not be up to date and may not reflect current conditions. Websites displaying real-time data, such as Earthquake and Water and information needed for public health and safety will be updated with limited support. Additionally, USGS will not be able to respond to inquiries until appropriations are enacted. For more information, please see www.doi.gov/shutdown
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The Ecosystems Mission Area provides impartial science information and tools to the Nation’s natural resource managers, with particular focus on the science needs of the Department of the Interior (DOI) and DOI bureaus to manage species, lands and priority ecosystems; fulfill treaty obligations; respond to and reduce threats to natural resources; and manage mineral and energy resources.
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Snake River fall Chinook salmon were listed as “threatened” under the Endangered Species Act in 1992. At that time, little was known about the spawning, rearing, migration, and life history of this species. This long-term research and monitoring project has produced much of the contemporary knowledge on fall Chinook salmon that has been used by fish managers to implement recovery measures. The...
USGS research on wildlife behavior, abundance, and sources of mortality are improving our understanding of the specific effects of renewable energy on wildlife and habitats. This knowledge is guiding the development of effective strategies to minimize the impact of renewable energy development on wildlife. USGS is improving and developing software models and statistical tools that can be used...
USGS scientists are studying how biofuel crops may be affecting pollinators, especially in the Northern Great Plains. Changes in land use from bee-friendly crops to biofuel crops likely impact pollinators.
Grazing resources for integrated conservation of bison and native prairie at Badlands National Park, South Dakota
Badlands National Park (BADL) contains one of the largest protected expanses of mixed-grass prairie in the United States, much of which supports a herd of nearly wild bison. The park nevertheless is too small to accommodate bison’s natural nomadic behavior, which in the past resulted in their ephemeral but intense influence on Great Plains grasslands. This research is assessing the spatial...
Residual toxicity testing and chemical characterization of ballast water following treatment with NaOH, sparging with scrubbed marine diesel engine exhaust, and aeration
Title of Study Plan: Residual toxicity testing and chemical characterization of ballast water following treatment with NaOH, sparging with scrubbed marine diesel engine exhaust, and aeration
Accurate and timely scientific information is critical to ensure appropriate management response to wildfires and effective investments in stabilization, rehabilitation, and restoration of landscapes immediately after wildfires occur. Currently, fire management organizations lack adequate scientific information to prioritize burned regions for suppression and restoration activities.
Grazing can have different impacts on an ecosystem including as a fire suppresant. USGS scientists are examining the effects of grazing in different environments to provide land resource managers with data they can use when determining grazing plans and actions.
Hurricanes are large-scale disturbances of such force and size that their influence on landscape pattern and processes of coastal systems is evident, though still poorly understood. The regularity and severity of tropical storms are major factors controlling ecosystem structure and succession for coastal ecosystems. Hurricane landfall rates vary greatly for given coastal stretches of the...
USGS scientists develop techniques for restoration and rehabilitation, provide tools that can be used to restore impaired ecosystems into healthy, resilient landscapes and watersheds that sustain plants and animals, and identify adaptation strategies for managers to plan and implement for ecosystem adaptation to natural and human-caused drivers of ecosystem change.
USGS science helps Interior land managers predict wildfire risk and behavior by understanding fuel loads and treatments, assess the risk for landslides, air and water quality impacts post-fire, and determine the most cost-effective and/or least impactful land and water management and restoration alternatives.
Protecting endangered species while managing economically important species is an ongoing natural
resource management challenge. USGS research will provide managers the information they need to manage endangered native species and economically important nonnative species using economically efficient approaches. The USGS biological/economic framework is also applicable to different natural...
This showcases the data and analytical products from studies related to habitat change, storm surge and ecological modeling, migratory bird impacts, and other studies conducted at WARC and funded by the Disaster Relief Appropriations Act of 2013. WARC's Advanced Applications Team also supports the efforts of scientists conducting research in Hurricane Sandy-impacted areas.
CRMS is the largest of all Coastal Wetlands Planning, Protection and Restoration Act (CWPRRA) funded projects and has established a network of ~400 biological monitoring stations across coastal Louisiana spanning all coastal habitat types and generating tremendous volumes of data.
MsCIP was developed in 2009 by the U.S. Army Corps of Engineers, Mobile District, in conjunction with other Federal and State agencies, to help reduce future storm damage along the Mississippi Gulf coast. In 2014, in cooperation with the USACE Mobile District, WARC's Advanced Applications Team began development on the MsCIP Data Viewer, an interactive web-mapping environment.
CWPPRA is the oldest and largest coastal restoration effort operating across coastal Louisiana and has constructed 105 restoration projects since its establishment over 20 years ago. WARC's Advanced Applications Team has proudly worked with the CWPPRA Task Force over the years to ensure timely and accurate project-specific information is publicly available.
The JEM community of practice is focused on ecological modeling and monitoring across the Greater Everglades, with particular interest in habitats, how various factors affect habitat change, and how the organisms dependent on those habitats respond today and into the future.
Working with the Joint Ecosystem Modeling (JEM) community of practice, the WARC Advanced Applications Team developed and maintains the EverVIEW Data Viewer desktop visualization platform, which allows users to easily visualize and inspect standards-compliant NetCDF modeling data and has experienced tremendous feature growth driven by user feedback.
WARC's Advanced Applications Team is responsible for data management and application development to support the biological monitoring components of coastal restoration projects in the Louisiana Coastal Protection and Restoration Authority portfolio.
Welcome to the Nonindigenous Aquatic Species (NAS) information resource for the United States Geological Survey. Located at Gainesville, Florida, this site has been established as a central repository for spatially referenced biogeographic accounts of introduced aquatic species.
The NAS provides spatially referenced biogeographic accounts of aquatic species introduced into the United States. The NAS allows for real-time queries, has regional contact information, species accounts and general information. Sign up for species-specific email alerts. Special maps available for zebra and quagga mussels, Asian carp and lionfish.
The central organizing framework for documentation, inventory, monitoring, and study of vegetation in the United States from broad scale formations like forests to fine-scale plant communities. The Classification allows users to produce uniform statistics about vegetation resources across the nation at local, regional, or national levels.
Nature’s Notebook is an online phenological monitoring program that currently supports data collection, storage and use for almost 250 animal species (including fish, insects, reptiles, amphibians, birds and mammals) and 650 plant species (including trees, shrubs, forbs, grasses and cacti). Available to anyone from scientists to nature enthusiast.
On the reliability of N‐mixture models for count data
N‐mixture models describe count data replicated in time and across sites in terms of abundance N and detectability p. They are popular because they allow inference about N while controlling for factors that influence p without the need for marking animals. Using a capture–recapture perspective, we show that the loss of information that results...Barker, Richard J.; Schofield, Matthew J.; Link, William A.; Sauer, John R.
Variation in inbreeding rates across the range of Northern Spotted Owls (Strix occidentalis caurina): Insights from over 30 years of monitoring data
Inbreeding has been difficult to quantify in wild populations because of incomplete parentage information. We applied and extended a recently developed framework for addressing this problem to infer inbreeding rates in Northern Spotted Owls (Strix occidentalis caurina) across the Pacific Northwest, USA. Using pedigrees from 14,187 Northern Spotted...Miller, Mark P.; Haig, Susan M.; Forsman, Eric D.; Anthony, Robert G.; Diller, Lowell; Dugger, Katie M.; Franklin, Alan B.; Fleming, Tracy L.; Gremel, Scott; Lesmeister, Damon B.; Higley, Mark; Herter, Dale R.; Sovern, Stan G
On the robustness of N‐mixture models
N‐mixture models provide an appealing alternative to mark–recapture models, in that they allow for estimation of detection probability and population size from count data, without requiring that individual animals be identified. There is, however, a cost to using the N‐mixture models: inference is very sensitive to the model's assumptions. We...Link, William A.; Schofield, Matthew R.; Barker, Richard J.; Sauer, John R.
Landbird population trends in mountain and historical parks of the North Coast and Cascades Network: 2005–2016 synthesis
Long-term monitoring of landbird populations within the National Park Service (NPS) North Coast and Cascades Inventory and Monitoring Network (NCCN) began in 2005, with the goal of detecting trends to inform the conservation and management of landbirds and their habitats. Here we use 2005–2016 data from over 3500 point-count stations to report...Ray, Chris; Saracco, James F.; Holmgren, Mandy; Wilkerson, Robert L.; Siegel, Rodney B.; Jenkins, Kurt J.; Ransom, Jason I.; Happe, Patricia J.; Boetsch, John R.; Huff, Mark H.
Decision making for mitigating wildlife diseases: From theory to practice for an emerging fungal pathogen of amphibians
Conservation science can be most effective in its decision‐support role when seeking answers to clearly formulated questions of direct management relevance. Emerging wildlife diseases, a driver of global biodiversity loss, illustrate the challenges of performing this role: in spite of considerable research, successful disease mitigation is...Canessa, Stefano; Bozzutto, Claudio; Campbell Grant, Evan H.; Cruickshank, Sam S.; Fisher, Matthew C.; Koella, Jacob C.; Lotters, Stefan; Martel, An; Pasmans, Frank; Scheele, Ben C.; Spitzen-van der Sluijs, Annemarieke; Steinfartz, Sebastian; Schmidt, Benedikt R.
Two-species occupancy modeling accounting for species misidentification and nondetection
In occupancy studies, species misidentification can lead to false‐positive detections, which can cause severe estimator biases. Currently, all models that account for false‐positive errors only consider omnibus sources of false detections and are limited to single‐species occupancy.However, false detections for a given species often occur because...Chambert, Thierry; Campbell Grant, Evan H.; Miller, David A. W.; Nichols, James; Mulder, Kevin P.; Brand, Adrianne B,
Research and management priorities for Hawaiian forest birds
Hawai‘i's forest birds face a number of conservation challenges that, if unaddressed, will likely lead to the extinction of multiple species in the coming decades. Threats include habitat loss, invasive plants, non-native predators, and introduced diseases. Climate change is predicted to increase the geographic extent and intensity of these...Paxton, Eben H.; Laut, Megan; Vetter, John P.; Kendall, Steve J.
Mercury on a landscape scale—Balancing regional export with wildlife health
The Cosumnes River watershed requires a 57–64 percent reduction in loads to meet the new Delta methylmercury (MeHg) total maximum daily load allocation, established by the Central Valley Regional Water Quality Control Board. Because there are no large point sources of MeHg in the watershed, the focus of MeHg load reductions will fall upon non-...Marvin-DiPasquale, Mark C.; Windham-Myers, Lisamarie; Fleck, Jacob A.; Ackerman, Joshua T.; Eagles-Smith, Collin A.; McQuillen, Harry
Rapid departure of Roseate Terns (Sterna dougallii) following large-scale nest failure
Nest failure of most pairs of Roseate Terns (Sterna dougallii) at Falkner Island, Connecticut, in 2002-2003 (due mainly to predation by Black-crowned Night-herons [Nycticorax nycticorax]) was followed by the rapid departure of many of the failed individuals in both years. Nine failed pairs (16.7%) stayed while 40 (74.1%) of 54 unsuccessful pairs...Spendelow, Jeffrey A.; Eichenwald, Adam J.
Use of Bank Swallow (Riparia riparia) burrows as shelter by Common Tern (Sterna hirundo) chicks
The availability of shelter to avoid predation and ameliorate physiologically stressful conditions is often important to the survival of avian hatchlings. However, as changes in habitat availability force birds to nest in nontraditional locations, young must quickly adapt to using novel sources of shelter. Two Common Tern (Sterna hirundo) colonies...McGowan, Peter C.; Reintsma, Kaitlyn; Sullivan, Jeffery D.; DeVoss, Katie P.; Wall, Jennifer L.; Zimnik, Mia D.; Callahan, Carl R.; Schultz, Bill; Prosser, Diann J.
Regeneration of Salicaceae riparian forests in the Northern Hemisphere: A new framework and management tool
Human activities on floodplains have severely disrupted the regeneration of foundation riparian shrub and tree species of the Salicaceae family (Populus and Salix spp.) throughout the Northern Hemisphere. Restoration ecologists initially tackled this problem from a terrestrial perspective that emphasized planting....Gonzalez, Eduardo; Martinez-Fernandez, Vanesa; Shafroth, Patrick B.; Sher, Anna A.; Henry, Annie L.; Garofano-Gomez, Virginia; Corenblit, Dov
Integrating animal movement with habitat suitability for estimating dynamic landscape connectivity
Context High-resolution animal movement data are becoming increasingly available, yet having a multitude of empirical trajectories alone does not allow us to easily predict animal movement. To answer ecological and evolutionary questions at a population level, quantitative estimates of a species’ potential to link patches or populations are of...van Toor, Mariëlle L.; Kranstauber, Bart; Newman, Scott H.; Prosser, Diann J.; Takekawa, John Y.; Technitis, Georgios; Weibel, Robert; Wikelski, Martin; Safi, Kamran
Permanent Control Site: GP1 West Transect; Depth: 8.0 m (26.2 feet); Distance from river mouth: 19.0 Kilometers (11.8 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.11852521,-123.31605203; Site Description: This site was established as the eastern control. Depth is medium-shallow. Substrate is mainly a gravel/sand/cobble mixture surrounding...
Permanent Site: F1 East Transect; Depth: 6.6 Meters (21.5 Feet); Distance from river mouth: 1.3 Kilometers (0.8 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.15292999, -123.55011402; Site Description: This is a shallow site. Substrate remains predominantly sand, but patches of gravel were present (0:39 seconds) as well as cobble onto which large...
Permanent Site: F1 West Transect; Depth: 6.7 Meters (22.0 Feet); Distance from river mouth: 1.3 Kilometers (0.8 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.15292999, -123.55078602; Site Description: This is a shallow site. Substrate remains predominantly sand. Larger brown seaweeds were present. These species are usually attached to gravel-...
Permanent Site: F2 East Transect; Depth: 11.2 Meters (36.9 Feet); Distance from river mouth: 1.5 Kilometers (0.9 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.15672004,-123.54969397; Site Description: Substrate is mainly a gravel/cobble mixture with an occasional boulder. Seven species of brown seaweed were present. Seaweed was abundant but not...
Permanent Site: J1 East Transect; Depth: 9.1 Meters (29.8 Feet); Distance from river mouth: 6.7 Kilometers (4.1 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.13607725,-123.47935008; Site Description: This site is medium depth. Substrate is mainly a gravel/sand mixture. Visibility was poor this day. Both red (0:51 seconds) and brown seaweed...
Permanent Site: J1 West Transect; Depth: 9.2 Meters (30.2 Feet); Distance from river mouth: 6.6 Kilometers (4.1 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.13607725,-123.48002186; Site Description: This site is medium depth. Substrate is mainly a gravel/sand mixture. Visibility was poor this day. Both red (0:48, 1:25 seconds) and brown seaweed...
Permanent Site: C2 East Transect; Depth: 15.1 Meters (49.7 Feet); Distance from river mouth: 0.7 Kilometers (0.4 Miles); Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.147841,-123.57596074; Site Description: One of our deepest sites. Substrate is all muddy sand. Both brown and red seaweeds are absent except for one acid kelp Desmarestia (0:38 seconds). Two...
Permanent Site: 4SP1 - East Transect; Depth: 5.5 Meters (18.1 Feet); Distance from river mouth: 0.8 Kilometers (0.5 Miles) East; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.15257, -123.556704; Site Description: The site has converted from gravel/cobble substrate to all sand. Since 2013, seaweed has been completely absent. However, this year three species...
Permanent Site: 4SP1 - West Transect; Depth: 6.2 Meters (20.2 Feet); Distance from river mouth: 0.8 Kilometers (0.5 Miles) East; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.15257, -123.557376; Site Description: This site has converted from gravel/cobble substrate to all sand. Since 2013, seaweed has been completely absent. However, this year six species of...
Permanent Control Site: GP2 East Transect; Depth: 13.2 Meters (43.2 Feet); Distance from river mouth: 18.8 Kilometers (11.7 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.12781102,-123.31645664; Site Description: This site was established as the eastern control. Substrate is mainly a gravel/sand mixture. A few large boulders are located off...
Permanent Control Site: GP2 West Transect; Depth: 12.7 Meters (41.6 Feet); Distance from river mouth: 18.8 Kilometers (11.6 Miles) east; Pre/Post Dam Removal: 6 years post-dam removal; Lat/Long: 48.12781102,-123.31712832; Site Description: This site was established as the eastern control. Substrate is mainly a gravel/sand/cobble mixture surrounding boulders. This year red...
American pika in the Northern Cascades. American pikas occupy talus slopes in mountain ecosystems throughout western North America.
Scientists can now predict which avian species are most sensitive to the increasingly dominant shrub habitat spreading across Alaska, a capability that will be useful for natural resource agencies in Alaska charged with managing these resources.
Get your flip-flops and shorts out because spring is arriving very early this year . . . at least 2-3 weeks early across almost the entire Southeast, from San Antonio to Atlanta to Washington, D.C. This unusually early spring is likely to keep rolling north, bringing relatively early ‘signs of spring’ to portions of the central Midwest and northeastern states.
Get your flip-flops and shorts out because spring is arriving very early this year . . . at least 2-3 weeks early across almost the entire Southeast, from San Antonio to Atlanta to Washington, D.C. This unusually early spring is likely to keep rolling north, already bringing surprising signs of spring to portions of the central Midwest and northeastern states.
Handbook for sagebrush steppe restoration techniques can help sustain wildlife and western ecosystems
The sagebrush ecosystem in the western U.S is one of the largest ecosystems in North America, but it is also threatened from wildfire and invasive plants. “Restoration of these unique ecosystems will help sustain wildlife and livelihoods throughout the West," said David Pyke, the USGS ecologist and lead author of the final installment of a three-part sagebrush restoration handbook.
New research shows how river diversions may change water quality in estuaries.
A new study analyzes the genetic diversity and population structure of the California Ridgway’s rail, Rallus obsoletus, a state and federally-listed endangered bird. The results demonstrate that the so-called “rails” are experiencing negative genetic effects following more than a century of salt marsh habitat loss from agriculture, commercial salt production and urban development.
The U.S. Geological Survey is pleased to announce the selection of Dr. Christian Zimmerman as the new director of their Alaska Science Center in Anchorage, Alaska. Zimmerman succeeds Dr. Mark Shasby who held the position for the past six years.
Changes in rainfall and temperature are predicted to transform wetlands in the Gulf of Mexico and around the world within the century, a new study from the USGS and the University of Texas Rio Grande Valley concludes.
A new study published in PLOS ONE demonstrates that current conservation planning efforts for waterbird habitat in the Central Valley can likely compensate for habitat loss through the middle of the century.
Managing 246 million acres: new science-based tools support Bureau of Land Management’s landscape approach
The U.S. Geological Survey and the Bureau of Land Management today released a collaborative report with new information and tools to support effective management of millions of acres of BLM public lands. The report underscores the value of a landscape approach to management, and shows that the BLM manages some of the largest areas of intact public lands in the west.
Hundreds of articles have been written about the largest volcanic eruption in recorded history, at Indonesia’s Mt. Tambora just over 200 years ago. But for a small group of New England-based researchers, one more Tambora story needed to be told, one related to its catastrophic effects in the Gulf of Maine that may carry lessons for intertwined human-natural systems facing climate change today.