Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42884
Spatial and temporal distribution of radio-tagged Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) suckers in Clear Lake Reservoir and associated spawning tributaries, Northern California, 2015–17 Spatial and temporal distribution of radio-tagged Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) suckers in Clear Lake Reservoir and associated spawning tributaries, Northern California, 2015–17
Executive Summary Data from a multi-year radio telemetry study were used to assess seasonal distribution patterns for two long-lived, federally endangered catostomids across substantially different water conditions in Clear Lake Reservoir, northern California. Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) suckers, two species endemic to the Klamath Basin, were...
Authors
Nathan Banet, David A. Hewitt, Amari Dolan-Caret, Alta C. Harris
Evaluation of camera trap-based abundance estimators for unmarked populations Evaluation of camera trap-based abundance estimators for unmarked populations
Estimates of species abundance are critical to understand population processes and to assess and select management actions. However, capturing and marking individuals for abundance estimation, while providing robust information, can be economically and logistically prohibitive, particularly for species with cryptic behavior. Camera traps can be used to collect data at temporal and...
Authors
S M Amburgey, Amy A. Yackel Adams, B. Gardner, N.J. Hostetter, S.R. Siers, B.T. McClintock, Sarah J. Converse
Maintaining momentum for collaborative working groups in a post-pandemic world Maintaining momentum for collaborative working groups in a post-pandemic world
Scientific progress depends in part on our ability to synthesize heterogeneous data and ideas into new models and paradigms. In environmental sciences, such synthesis has been particularly effective when conducted by collaborative working groups: diverse groups of researchers and practitioners brought together for a concentrated period of collaboration on key questions. Such work is...
Authors
Diane Srivastava, Marten Winter, Louis Gross, Jena Paul Metzger, Jill S. Baron, Nicolas Mouquet, Thomas Meagher, Ben Halpern, Valerio Pillar
Southwestern bats and their external bacteria Southwestern bats and their external bacteria
Bat species diversity within the United States is greatest in the Southwest, with approximately 30 species present. At least 16 of these bat species hibernate and are susceptible to white-nose syndrome (WNS), which is caused by the fungus Pseudogymnoascus destructans. Since 2006, millions of bats from 35 U.S. states and 7 Canadian provinces have died from WNS. In previous studies of...
Authors
Ernest W. Valdez, Emily M. Johnson, Edward W. Strach, Patrick A. Lewis, William C Briggs, Nicole A. Caimi, Ara S. Winter, Diana E. Northup, Jennifer J.M. Hathaway
Ecological correlates of fecal corticosterone metabolites in female Greater Sage-Grouse (Centrococercus urophasianus) Ecological correlates of fecal corticosterone metabolites in female Greater Sage-Grouse (Centrococercus urophasianus)
Measurement of physiological responses can reveal effects of ecological conditions on an animal and correlate with demographic parameters. Ecological conditions for many animal species have deteriorated as a function of invasive plants and habitat fragmentation. Expansion of juniper (Juniperus spp.) trees and invasion of annual grasses into sagebrush (Artemisia spp.) ecosystems have...
Authors
Jordan C. Rabon, Cassandra Nunez, Peter S. Coates, Mark A. Ricca, Tracey N. Johnson
Toward climate change refugia conservation at an ecoregion scale Toward climate change refugia conservation at an ecoregion scale
Climate change uncertainty poses serious challenges to conservation efforts. One emerging conservation strategy is to identify and conserve climate change refugia: areas relatively buffered from contemporary climate change that enable persistence of valued resources. This management paradigm may be pursued at broad scales by leveraging existing resources and placing them into a tangible...
Authors
Cathleen Balantic, Andrea Adams, Shana Gross, Rachel Mazur, Sarah Sawyer, Jody Tucker, Marian Vernon, Claudia Mengelt, Jennifer Morales, James Thorne, Timothy Brown, Nicole Athearn, Toni Lyn Morelli
Twenty-five essential research questions to inform the protection and restoration of freshwater biodiversity Twenty-five essential research questions to inform the protection and restoration of freshwater biodiversity
Freshwater biodiversity is declining at an unprecedented rate. Freshwater conservationists and environmental managers have enough evidence to demonstrate that action must not be delayed but have insufficient evidence to identify those actions that will be most effective in reversing the current trend.Here, the focus is on identifying essential research topics that, if addressed, will...
Authors
Meagan Harper, Hebah S. Mejbel, Dylan Longert, Robin Abell, Beard, Joseph R. Bennett, Stephanie M. Carlson, William Darwall, Anthony Dell, Sami Domisch, David Dudgeon, Jörg Freyhof, Ian Harrison, Kathy A. Hughes, Sonja C. Jahnig, Jonathan M. Jeschke, Richard Lansdown, Mark Lintermans, Abigail J. Lynch, Helen M. R. Meredith, Sanjay Molur, Julian D. Olden, Steve J. Ormerod, Harmony Patricio, Andrea J. Reid, Astrid Schmidt-Kloiber, Michele Thieme, David Tickner, Eren Turak, Olaf L. F. Weyl, Steve J. Cooke
Responses of soil extracellular enzyme activities and bacterial community composition to seasonal stages of drought in a semiarid grassland Responses of soil extracellular enzyme activities and bacterial community composition to seasonal stages of drought in a semiarid grassland
Extreme drought can strongly impact belowground communities and biogeochemical processes, including soil microbial community composition and extracellular enzyme activities (EEAs), which are considered key agents in ecosystem carbon (C) and nutrient cycling. However, our understanding of how seasonal timing of drought during the growing season affects soil microbial communities and their...
Authors
Wenlan Gao, Sasha C. Reed, Seth M. Munson, Yichao Rui, Wenyuan Fan, Zhenzhen Zheng, Linfeng Li, Rongxiao Che, Kai Xue, Jianqing Du, Xiaoyong Cui, Yanfen Wang, Yanbin Hao
Optimizing preservation for multiple types of historic structures under climate change Optimizing preservation for multiple types of historic structures under climate change
Cultural resources in coastal parks and recreation areas are vulnerable to climate change. The US National Park Service (NPS) is facing the challenge of insufficient budget allocations for both maintenance and climate adaptation of historic structures. Research on adaptation planning for cultural resources has predominately focused on vulnerability assessments of heritage sites; however...
Authors
Xiao Xiao, Erin Seekamp, Junyu Lu, Mitchell J. Eaton, Max Post van der Burg
Gap-filling eddy covariance methane fluxes: Comparison of machine learning model predictions and uncertainties at FLUXNET-CH4 wetlands Gap-filling eddy covariance methane fluxes: Comparison of machine learning model predictions and uncertainties at FLUXNET-CH4 wetlands
Time series of wetland methane fluxes measured by eddy covariance require gap-filling to estimate daily, seasonal, and annual emissions. Gap-filling methane fluxes is challenging because of high variability and complex responses to multiple drivers. To date, there is no widely established gap-filling standard for wetland methane fluxes, with regards both to the best model algorithms and...
Authors
Jeremy Irvin, Sharon Zhou, Gavin McNicol, Fred Lu, Vincent Liu, Etienne Fluet-Chouinard, Zutao Ouyang, Sara Helen Knox, Antje Lucas-Moffat, Carlo Trotta, Dario Papale, Domenico Vitale, Ivan Mammarella, Pavel Alekseychik, Mika Aurela, Anand Avati, Dennis Baldocchi, Sheel Bansal, Gil Bohrer, David I. Campbell, Jiquan Chen, Housen Chu, Higo J. Dalmagro, Kyle B. Delwiche, Ankur R. Desai, Eugenie S. Euskirchen, Sarah Feron, Mathias Goeckede, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, Hiroki Iwata, Gerald Jurasinski, Aram Kalhori, Andrew Kondrich, Derrick Y. F. Lai, Annalea Lohila, Avni Malholtra, Lutz Merbold, Bhaskar Mitra, Andrew Ng, Mats B. Nilsson, Asko Noormets, Matthias Peichl, A. Camilo Rey-Sanchez, Andrew D. Richardson, Benjamin R. K. Runkle, Karina V. R. Schafer, Oliver Sonnentag, Ellen Stuart-Haëntjens, Cove Sturtevant, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, George L. Vourlitis, Eric Ward, Guan Xhuan Wong, Donatella Zona, Ma. Carmelita R. Alberto, David P. Billesbach, Gerardo Celis, Han Dolman, Thomas Friborg, Kathrin Fuchs, Sebastien Gogo, Mangaliso J. Gondwe, Jordan P. Goodrich, Pia Gottschalk, Lukas Hortnagl, Adrien Jacotot, Franziska Koebsch, Kuno Kasak, Regine Maier, Timothy H. Morin, Eiko Nemitz, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Torsten Sachs, Ayaka Sakabe, Edward A. Schuur, Robert Shortt, Ryan C. Sullivan, Daphne J. Szutu, Eeva-Stiina Tuittila, Andrej Varlagin, Joseph G. Verfaillie, Christian Wille, Lisamarie Windham-Myers, Benjamin Poulter, Robert B. Jackson
Instruments, methods, rationale, and derived data used to quantify and compare the trapping efficiencies of four types of pressure-difference bedload samplers Instruments, methods, rationale, and derived data used to quantify and compare the trapping efficiencies of four types of pressure-difference bedload samplers
Bedload and ancillary data were collected to calculate and compare the bedload trapping efficiencies of four types of pressure-difference bedload samplers as part of episodic, sediment-recirculating flume experiments at the St. Anthony Falls Laboratory, University of Minnesota, Minneapolis, in January–March 2006. The bedload-sampler experiments, which were conceived, organized, and led...
Authors
John R. Gray, Gregory E. Schwarz, David J. Dean, Jonathan A. Czuba, Joel T. Groten
A comparative baseline of coral disease in three regions along the Saudi Arabian coast of the central Red Sea A comparative baseline of coral disease in three regions along the Saudi Arabian coast of the central Red Sea
Coral disease is a growing problem for coral reefs globally and diseases have been linked to thermal stress, excess nutrients, overfishing and other human impacts. The Red Sea is a unique environment for corals with a strong environmental gradient characterized by temperature extremes and high salinities, but minimal terrestrial runoff or riverine input and their associated pollution...
Authors
Greta S. Aeby, Amanda Shore, Thor Jensen, Maren Ziegler, Thierry M. Work, Christian Voolstra