All Publications
Access all publications and filter by type, location, and search for keywords to find specific science and data information conducted by our scientists.
Filter Total Items: 177535
A genomic tool to tackle cryptic diversity demonstrates the potential for off-target use of GT-seq panels A genomic tool to tackle cryptic diversity demonstrates the potential for off-target use of GT-seq panels
A comprehensive understanding of life history is vital to successful species conservation and management. When different life history stages are accompanied by considerable morphological or cryptic variation, such as the egg and larval phases exhibited by most fishes, genomic tools are essential for identifying species so that early-life ecology questions can be studied. Genotyping-in...
Authors
Amanda Susanne Ackiss, Mark R. Vinson, Ann J. Ropp, Kristen M. Gruenthal, Trevor J. Krabbenhoft, Joseph V. Siegel, Wendylee Stott, Daniel L. Yule, Wesley A. Larson
Special Contributing Area Loading Program user’s manual Special Contributing Area Loading Program user’s manual
Information on the Special Contributing Area Loading Program execution and functions are presented in this user’s manual. An appendix presents a potential improvement for the user to consider. The hydrologic routing simulation method to model flow through multiple reservoirs, or sewer system components, is described. The use of Special Contributing Areas is described to run a successful...
Authors
Richard J. Huizinga, David H Dupre
Application of novel encounter and predation models to the natural behavior of slimy sculpin Cottus cognatus Application of novel encounter and predation models to the natural behavior of slimy sculpin Cottus cognatus
Sculpins play a critical mid-trophic role in lacustrine food webs, converting production by benthic and migrating pelagic invertebrates into biomass available to higher trophic levels. Although sculpin diets and habitat choices are relatively well described, much less is known about their in situ behavior which governs trophic interactions and, in part, prey behavior. We measured the...
Authors
Eden J Forbes, Jonah T. Ballard, Brian O’Malley, Jason D Stockwell
An assessment of the quality of microanalysis of natural silicate glass using scanning electron microscope-based energy dispersive spectrometry (SEM-EDS) An assessment of the quality of microanalysis of natural silicate glass using scanning electron microscope-based energy dispersive spectrometry (SEM-EDS)
The composition of volcanic glass records important clues into the origin and evolution of magmatic systems. However, the analysis of volcanic glass presents challenges when performed using electron-beam techniques, particularly due to Na mobility. While microanalysis of geological materials is usually performed using electron probe microanalyzer-based wavelength-dispersive spectrometry...
Authors
Guilherme A.R. Gualda, Alessandro Frontoni, Blake M. Wallrich, Lydia J. Harmon, Sarah L. Smithies, Genna Raine Chiaro, Ayla S. Pamukcu
Remote detection of streambank erosion and channel incision using high-resolution, repeat lidar-derived metrics in Raleigh, North Carolina Remote detection of streambank erosion and channel incision using high-resolution, repeat lidar-derived metrics in Raleigh, North Carolina
This study evaluated the use of lidar data to detect streambank erosion and channel incision throughout Raleigh, North Carolina. The study included five components. (1) Generation of lidar-derived rasters, including a digital elevation model of difference that represented channel erosion and positive openness rasters that represented channel incision. (2) Completion of site-based field...
Authors
Laura N. Gurley, Kristina G. Hopkins, Charles C. Stillwell, Deanna Hardesty
Effect of land-use change and climate on coral calcification and geochemistry: A 253-year time series from west Maui Effect of land-use change and climate on coral calcification and geochemistry: A 253-year time series from west Maui
Land-use change and climate variability both regulate land-based inputs of sediment and nutrient delivery to coral reefs, yet few records in Hawaii can identify when these land-based inputs began or how they have evolved through time. We present a 253-year (1760–2013) coral core record from Olowalu reef, Maui, spanning pre-colonial settlement through the rise and decline of sugarcane...
Authors
S. A.H. Kekuewa, Nancy G. Prouty, E. M. Nalley, N. J. Hawco, C. E. Nelson, A. K. Kealoha
Description of multiple cryptic species of Obovaria Rafinesque, 1819 (Bivalvia: Unionida) from the Mississippi Embayment and Gulf coastal rivers of North America Description of multiple cryptic species of Obovaria Rafinesque, 1819 (Bivalvia: Unionida) from the Mississippi Embayment and Gulf coastal rivers of North America
The freshwater mussel genus Obovaria (Bivalvia: Unionidae) has long been recognized as taxonomically challenging due to plastic shell morphology, historical misidentifications, and incomplete geographic sampling across the southeastern United States. Using an integrated approach combining shell morphology, comparative conchology, geographic distribution, and molecular phylogenetic...
Authors
Kentaro Inoue, John L. Harris, Nathan Johnson
Detecting demographic patterns of old coast redwood forests in northern California Detecting demographic patterns of old coast redwood forests in northern California
Forest demography is difficult to describe accurately. Tree recruitment and mortality are uncommon events, so that rates based on these observations often require long survey periods using large numbers of trees. Demographic rates can scale with tree size, so challenges describing demography are pronounced in coast redwood forests that are dominated by extremely large Sequoia...
Authors
Phillip J. van Mantgem, Micah C. Wright
Fire regime shift reveals 17th century socio-ecological change in the Rio Grande del Norte National Monument, New Mexico Fire regime shift reveals 17th century socio-ecological change in the Rio Grande del Norte National Monument, New Mexico
Humans have influenced ecosystems for millennia, and social changes can have notable ecological effects. Recent human influence on ecosystems is exemplified by the collapse of fire regimes circa 1900 in the western United States due to increased grazing, fire suppression, and declining Indigenous fire use. Climate can also drive fire regime changes, which is reflected by increasing area...
Authors
Carolina Jasmine May, Manuel K. Lopez, Ellis Q. Margolis
Reservoir cascades as directional invasion corridors Reservoir cascades as directional invasion corridors
Reservoir cascades in large river systems impose directional pathways that can structure biological invasions, yet how these pathways interact with propagule supply and lock-mediated passage opportunity to influence arrival timing remains poorly understood. We used interval- and right-censored time-to-event models to evaluate spread dynamics of silver carp (Hypophthalmichthys molitrix)...
Authors
Leandro E. Miranda, Mirtha A. Angulo-Valencia, Caleb A. Aldridge
IVyTools: Space-Time Image Velocimetry for streamflow IVyTools: Space-Time Image Velocimetry for streamflow
Accurate streamflow measurements are essential for hydrologic monitoring, flood forecasting, and water resource management. Traditional in situ methods, although reliable, are often impractical or unsafe during flood conditions or at inaccessible locations. Image velocimetry techniques offer a potential non-contact alternative, yet operational adoption has been hindered by the lack of...
Authors
Frank L. Engel, Travis M. Knight, Elizabeth A. Nystrom, Christopher Blaine Grindle