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Preprints

Browse preprint publications authored by USGS scientists.

Filter Total Items: 82

Space-based monitoring of penguin diet links sea ice, food webs, and population change Space-based monitoring of penguin diet links sea ice, food webs, and population change

Rapid environmental change poses a threat to Antarctic ecosystems. However, the spatial scale of Antarctica and its extreme environment have precluded a synoptic understanding of the links between environmental change and ecological responses. Combining tools from imaging spectroscopy, stable isotope analysis, and hierarchical statistical modeling, we developed a novel method to quantify...
Authors
Casey Youngflesh, Christian Joseph Che-Castaldo, Mathew R. Schwaller, Michael J. Polito, Shawn P. Serbin, Heather J. Lynch

A systematic literature review of forecasting and predictive models of harmful algal blooms in flowing waters A systematic literature review of forecasting and predictive models of harmful algal blooms in flowing waters

Occurrences of harmful algal blooms (HABs) in rivers challenge the belief that rivers are not susceptible to HABs because of their short residence times and fluctuating hydrology. Here we present a systematic literature review of predictive and forecasting models for HABs in flowing waters, including rivers, flowing in-stream reservoirs (e.g., run-of-river reservoirs and lock-and-dam...
Authors
Jennifer C. Murphy, Rebecca M. Gorney, Lisa V. Lucas, Jacob Aaron Zwart, Jennifer L. Graham

A system dynamics model to understand the integrated ecological and human dimension aspects of wildlife health and disease management A system dynamics model to understand the integrated ecological and human dimension aspects of wildlife health and disease management

Chronic wasting disease (CWD) presents an ongoing challenge for the management of deer populations and sustaining harvest opportunities across North America. Existing disease models often fail to fully capture the complex interplay between disease dynamics, host ecology, and socio-economic factors. We developed a comprehensive system dynamics (SD) model that integrates demographic...
Authors
Stephanie R. Penk, Christine Anhalt-Depies, Richard Eugene Waggaman Berl, Thomas S. Fiddaman, Kawika Pierson, Jennifer L. Price Tack, Bryan Richards, Erica Rieder, Daniel J. Storm, C. LeAnn White, Daniel P. Walsh

Beyond the mangroves: A global synthesis of tidal forested wetland types, drivers and future information opportunities Beyond the mangroves: A global synthesis of tidal forested wetland types, drivers and future information opportunities

There is increasing awareness of the global diversity of tidal forested wetlands (TFWs) and their significance in the provision of ecosystem services. These ecosystems, including mangrove forests, tidal freshwater forested wetlands, supratidal forests and transitional forests together span multiple climatic zones, geomorphic settings, and inundation and salinity regimes. We utilise case...
Authors
J. J. Kelleway, Gregory B. Noe, Ken W. Krauss, L.S. Brophy, W. H. Conner, J. A. Duberstein, D. A. Friess, K. Gedan, E. White, M. F. Adame, J. B. Adams, R. C. Carvalho, A. Freddie, I. N. Ikenna, E. R. Ocasio, C. J. Owers, S. Sasmito, A. Swales, P. Stewart-Sinclair, R. D. Ward, I. Zabarte-Maeztu

Machine learning generated streamflow drought forecasts for the Conterminous United States (CONUS): Developing and evaluating an operational tool to enhance sub-seasonal to seasonal streamflow drought early warning for gaged locations Machine learning generated streamflow drought forecasts for the Conterminous United States (CONUS): Developing and evaluating an operational tool to enhance sub-seasonal to seasonal streamflow drought early warning for gaged locations

Forecasts of streamflow drought, when streamflow declines below typical levels, are notably less available than for floods or meteorological drought, despite widespread impacts. To address this gap, we apply machine learning (ML) models to forecast streamflow drought 1-13 weeks into the future at > 3,000 streamgage locations across the conterminous United States (CONUS). We applied two...
Authors
John C. Hammond, Phillip J. Goodling, Jeremy Alejandro Diaz, Hayley R. Corson-Dosch, Aaron Joseph Heldmyer, Scott Douglas Hamshaw, Ryan R. McShane, Jesse Cleveland Ross, Roy Sando, Caelan Simeone, Erik Smith, Leah Ellen Staub, David Watkins, Michael Wieczorek, Kendall C. Wnuk, Jacob Aaron Zwart

Assessment of natural gas pipeline construction on stream temperature and turbidity in southwestern Virginia, 2017—25 Assessment of natural gas pipeline construction on stream temperature and turbidity in southwestern Virginia, 2017—25

The natural gas pipeline network in the United States is extensive and often intersects streams and other sensitive habitats, yet there are limited case studies utilizing a comparative upstream-downstream approach to evaluate potential short- and long-term effects of pipeline stream crossing construction from pre-construction to post-site restoration. In 2017, the U.S. Geological Survey...
Authors
Brendan M. Foster, Carly Marcella Maas, Alejandra Logan Flota

Sensitive environmental DNA methods for low-risk surveillance of at-risk bumble bees Sensitive environmental DNA methods for low-risk surveillance of at-risk bumble bees

Terrestrial environmental DNA (eDNA) techniques have been proposed as a means of sensitive, non-lethal pollinator monitoring. To date, however, no studies have provided evidence that eDNA methods can achieve detection densities on par with traditional pollinator surveys. Using a large-scale dataset of eDNA and corresponding net surveys, we show that eDNA methods enable sensitive, species...
Authors
Rodney T. Richardson, Grace Avalos, Cameron J. Garland, Regina Trott, Olivia Hager, Mark J. Hepner, Clayton D. Raines, Karen Goodell

Relationships between water quality, stream metabolism, and water stargrass growth in the lower Yakima River, 2018 to 2020 Relationships between water quality, stream metabolism, and water stargrass growth in the lower Yakima River, 2018 to 2020

Since the early 2000s, water clarity on the lower Yakima River has improved. Changes in best management practices combined with a total maximum daily load for suspended sediment led to these improved conditions. As water clarity improved, so did conditions for aquatic plants; the clearer the water, the better the light penetration, and dramatic increases in plant biomass were observed...
Authors
Rich W. Sheibley, Marcella Appel, James R. Foreman

Estimating the probability of export restrictions to inform mineral criticality Estimating the probability of export restrictions to inform mineral criticality

As demand for advanced technologies rises, mineral commodities will increase in geopolitical importance. To assess risks associated with mineral commodity supply chain disruptions, governmental agencies and others have developed "criticality" assessments, with criticality described using the economic impact and probability of supply chain disruptions. In previous work, subjective supply...
Authors
John W. Ryter, Nedal T. Nassar

A spatial analysis of the groundwater emergence flood hazard in Long Island, New York and near coastal areas surrounding Long Island Sound in New York, Connecticut, and Rhode Island A spatial analysis of the groundwater emergence flood hazard in Long Island, New York and near coastal areas surrounding Long Island Sound in New York, Connecticut, and Rhode Island

Long Island, New York and near coastal areas surrounding Long Island Sound are densely populated and, like other coastal areas, are susceptible to flooding from several potential sources, including stormwater from precipitation events, tidal flooding and storm surge, and groundwater inundation or groundwater emergence flooding. The latter refers to the intersection of a rising water...
Authors
Kristina Kirkyla Masterson, Robert J. Welk, Janet R. Barclay, Kalle Jahn, Liv M. Herdman

Scalable environmental DNA methods reveal strong associations between landscape-scale forest habitat and insect richness Scalable environmental DNA methods reveal strong associations between landscape-scale forest habitat and insect richness

While aquatic environmental DNA (eDNA) methods have reached relative maturity, terrestrial eDNA methods are nascent and have yet to reach widespread use. Field-ready applications require eDNA survey methods where samples are easy to collect by inexperienced practitioners, easy to transport between the field and lab, and easy to process thereafter. Here, we demonstrate methods that...
Authors
Rodney T. Richardson, Grace Avalos, Cameron J. Garland, Regina Trott, Olivia Hager, Mark J. Hepner, Clayton D. Raines, Karen Goodell

Novel adomaviruses associated with blotchy bass syndrome in black basses (Micropterus spp.) Novel adomaviruses associated with blotchy bass syndrome in black basses (Micropterus spp.)

Black bass (Micropterus spp.) are the most important warmwater game fishes in the United States. They have high socioeconomic and recreational value and support an important aquaculture industry. Since 2008, fisheries managers have been reporting the observation of hyperpigmented melanistic lesions (HPMLs) on smallmouth bass (M. dolomieu) in different ecoregions of the United States...
Authors
Luke R. Iwanowicz, Clayton D. Raines, Kelsey E. Young, Vicki S. Blazer, Heather L. Walsh, Geoff Smith, Cynthia Holt, John Odenkirk, Tom Jones, Jan-Michael Hessenauer, Morgan Alexandra Biggs, Christopher B. Buck, Justin Blaine Greer, Robert S. Cornman
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