Preprints

Algal blooms in freshwater reservoirs are an increasing concern because of the risk to aquatic ecosystem health, recreational use, and water quality. Among the taxa that comprise an algal bloom, cyanobacteria are of particular concern due to the potential to produce toxic compounds which can cause acute and chronic illness in humans if ingested through contaminated water or shellfish...

Species are redistributing their ranges globally in response to climate change, but the fragmented and complex nature of the documented responses make them challenging to track and analyze. Synthesis of species’ range shifts requires careful integration and consideration of varying methods and scales of study. Here, we present an updated database that combines two previous data...

We fit an N-mixture model to lek (breeding area) count data to estimate annual population sizes of greater sage-grouse (Centrocercus urophasianus; sage-grouse) within the state of Oregon, USA between 2017–2024. Population estimates were delineated among 24 Priority Areas for Conservation (PACs) and considered additional sources of information including male-to-female sex ratios, lek...

Chronic wasting disease (CWD), a fatal, transmissible disease in white-tailed deer (Odocoileus virginianus) and related species, is spreading across North America but has not yet been detected in Vermont, United States (U.S.). The Vermont Department of Fish and Wildlife, along with partner agencies, wants to develop a proactive prevention and response plan in anticipation of the eventual...

Upgrading aging and undersized stream crossings (places where culverts and bridges intersect a stream) with replacements designed for aquatic organism passage can improve infrastructure resiliency, geomorphic stability, and maintenance costs. The goal of this work is to develop preliminary culvert designs that convey hydraulic design floods and meet the Massachusetts Stream Crossings...

Whole-genome duplication (WGD) is hypothesized to spur evolutionary diversification by producing genome-wide duplicate gene sets (Ohnologs) that are initially functionally redundant but can diverge markedly as the effects of relaxed selection accumulate over time. However, the underlying mechanisms remain unclear, in part because genomic studies often reconstruct Ohnolog evolution over...

Connecting drought drivers to drought conditions and drought conditions to consequences are two key components of drought risk assessment. We propose a two-step data-driven approach that contributes to advancing this capability. First, we use machine learning feature selection techniques to transform hydrologic model outputs into calculated indices and determine which features are most...

Segregated variation between populations is a fundamental evolutionary process leading to parasite specialization, yet the resulting impacts on infection heterogeneity within populations are theoretically and empirically understudied. We asked whether the distribution of host susceptibility to infection within populations carries the signatures of geographic structure from pathogen local

Algal blooms represent ecosystem state shifts that degrade drinking water, restrict recreation, threaten public health, and lower property values. Detecting blooms in advance on management relevant timescales of days to weeks can support proactive intervention. Early warning statistics derived from indicator time series offer a framework for detecting state shifts, but the use of lake...

This cruise report describes work from leg three of the NOAA American Samoa Abyssal Mapping effort, OPR-T900-KR-26. Leg one preceded this effort and collected ship-based acoustic data. Leg two collected autonomous underwater vehicle (AUV) data and began before, continued contemporaneously, and finished subsequently to leg three. The USGS field activity number assigned to this expedition...

A comprehensive understanding of life history is vital to successful species conservation and management. When different life history stages are accompanied by considerable morphological or cryptic variation, such as the egg and larval phases exhibited by most fishes, genomic tools are essential for identifying species so that early-life ecology questions can be studied. Genotyping-in...

Floating photovoltaic (FPV) arrays alter the methane (CH4) cycling dynamics of waterbodies on which they are deployed. Here, we investigated dissolved CH4 dynamics and associated CH4 cycling microbial communities (methanogens and methanotrophs) in the second year of FPV deployment (70% aerial coverage) in experimental ponds. We found that bottom-water CH4 concentrations were twice as...