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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 174960

Managing water for birds—A tool for the Malheur National Wildlife Refuge, southeastern Oregon Managing water for birds—A tool for the Malheur National Wildlife Refuge, southeastern Oregon

The “Water for Birds Tool” is a spreadsheet-based tool (using Microsoft Excel) designed to help resource managers assess the spatial extent and types of bird habitats in the Malheur National Wildlife Refuge, southeastern Oregon. The tool quantifies the areas of open water, partial water, and water depths on a monthly timescale during the irrigation season (April–July) from 2021 to 2024...
Authors
Cassandra D. Smith

Pre-restoration woody species crown and vegetation community mapping using high-resolution uncrewed aerial system imagery, Palmyra Atoll Pre-restoration woody species crown and vegetation community mapping using high-resolution uncrewed aerial system imagery, Palmyra Atoll

The terrestrial management plan for Palmyra Atoll includes large-scale removal of coconut (Cocos nucifera) as part of native forest restoration and contaminant remediation that will leave soils and vegetation communities profoundly altered. To inform those efforts and provide baseline data for restoration monitoring, woody stem crowns and vegetation communities at Palmyra Atoll were...
Authors
Matthew Struckhoff

If you build it, will they come? Assessing the response of tiger populations to elevated conservation efforts in lowland Nepal If you build it, will they come? Assessing the response of tiger populations to elevated conservation efforts in lowland Nepal

Thirteen countries within the distributional range of tigers adopted the St. Petersburg Declaration in 2010, committing to double their tiger populations by 2022. As a signatory to this document, Nepal elevated its tiger conservation efforts soon after the declaration was adopted. Using capture-mark-recapture (CMR) analyses of tiger survey data (2013–2022), we assessed the response of...
Authors
Saneer Lamichhane, Abhinaya Pathak, Ajay Karki, Ambika P. Khatiwada, Chiranjibi Prasad Pokheral, James E. Hines, Dave P. Onorato, Taylor V. Stein, Madan K. Oli

Remote sensing of river discharge based on critical flow theory Remote sensing of river discharge based on critical flow theory

Critical flow theory provides a physical foundation for inferring discharge from measurements of wavelength and channel width made from images. In rivers with hydraulically steep local slopes greater than ∼0.01, flow velocities are high and the Froude number F r (ratio of inertial to gravitational forces) can approach 1.0 (critical flow) or greater. Under these conditions, undular...
Authors
Carl J. Legleiter, Gordon E. Grant, Inhyeok Bae, Becky Fasth, Elowyn Yager, Daniel C. White, Laura A. Hempel, Merritt Elizabeth Harlan, Christina Leonard, Robert W. Dudley

Wild Burmese python nest site selection, thermogenesis, and brooding behaviors in the Greater Everglades Ecosystem Wild Burmese python nest site selection, thermogenesis, and brooding behaviors in the Greater Everglades Ecosystem

Invasive Burmese pythons (Python bivittatus) are extremely cryptic animals. Although their conservation status in their native range is Vulnerable, in the Greater Everglades Ecosystem (Florida, USA) they have become a dominant destructive force and usually are immediately removed whenever found. This poses a paradox where removals are occurring, yet the study and understanding of python...
Authors
Andrea Faye Currylow, Lisa Marie McBride, Gretchen Erika Anderson, Jacquelyn C. Guzy, Matthew F. McCollister, Christina M. Romagosa, Kristen Hart, Amy A. Yackel Adams

Mapping eelgrass (Zostera marina) cover and biomass at Izembek Lagoon, Alaska, using in-situ field data and Sentinel-2 satellite imagery Mapping eelgrass (Zostera marina) cover and biomass at Izembek Lagoon, Alaska, using in-situ field data and Sentinel-2 satellite imagery

The U.S. Geological Survey and the U.S. Fish and Wildlife Service have developed a three-tiered strategy for monitoring eelgrass (Zostera marina) beds at Izembek Lagoon, Alaska, that targets different spatial and temporal scales. The broadest-scale monitoring (tier-1) uses satellite imagery about every 5 years to delineate the spatial extent of eelgrass beds throughout the lagoon. This...
Authors
David C. Douglas, Michael D. Fleming, Vijay P. Patil, David H. Ward

Highly pathogenic avian influenza virus exposure and infection in free-ranging bobcats (Lynx rufus) in New York, USA Highly pathogenic avian influenza virus exposure and infection in free-ranging bobcats (Lynx rufus) in New York, USA

Highly pathogenic H5N1 influenza A virus (HP H5N1) cases in wild mammals have been increasing globally. Carnivora has been the most affected mammal order; however, the extent of morbidity and mortality in carnivores exposed to HP H5N1 remains undefined. We assessed the presence of antibodies to H5 and N1 in the sera of 16 live-captured bobcats (Lynx rufus) in New York State, USA...
Authors
Haley M. Turner, Angela K. Fuller, Joshua P. Twining, Gavin R. Hitchener, Melissa A. Fadden, David E. Stallknecht, Rebecca L. Poulson, Deborah L. Carter, Mandy B. Watson, Krysten L. Schuler, Jennifer C. Bloodgood

Observation of unusual neonate-clustering behavior on maternal Cambarus chasmodactylus (New River Crayfish) after molting Observation of unusual neonate-clustering behavior on maternal Cambarus chasmodactylus (New River Crayfish) after molting

Cambarus chasmodactylus (New River Crayfish) is one of the largest crayfish species occurring in the Appalachian Mountains and occupies a niche similar to several highly imperiled crayfishes within the same region. While conducting a controlled mesocosm study assessing the impacts of contaminants on crayfish growth, development, and reproductive status, we recorded an observation where...
Authors
Anna Marie Welsh, Zachary J. Loughman, Zackary A. Graham, Paula F. P. Henry

Integrating acoustic telemetry research into management: successes and challenges in the Laurentian Great Lakes Integrating acoustic telemetry research into management: successes and challenges in the Laurentian Great Lakes

In the Laurentian Great Lakes, the application of acoustic telemetry to track fish movements has evolved into an important part of multijurisdictional management. Nevertheless, barriers remain in translating telemetry research into management or conservation actions. Here, we synthesize acoustic telemetry literature within the Great Lakes basin to explore factors that have contributed to...
Authors
Natalie V. Klinard, Christopher S. Vandergoot, Andrew S. Briggs, Connor W. Elliott, Matthew D. Faust, David G. Fielder, Dimitry Gorsky, Travis Hartman, Christopher Holbrook, Daniel A. Isermann, Jonathan D. Midwood, Michael J. Siefkes, Justin VanDeHey, Dan Wilfond, Todd C. Wills, Troy Zorn, Ana P. Barbosa Martins, Arun Oakley-Cogan, Aaron T. Fisk, Jordan K. Matley

Characterization of the long-distance dispersal kernel of white-tailed deer and evaluating its impact on chronic wasting disease spread in Wisconsin Characterization of the long-distance dispersal kernel of white-tailed deer and evaluating its impact on chronic wasting disease spread in Wisconsin

Chronic wasting disease (CWD) is a fatal neurodegenerative disease infecting cervids. It is highly contagious and caused by misfolded prions that propagate via templated conformational conversion of the cervid’s normal prion protein. Prevalence of CWD in free-ranging deer in North America is mostly low, but in some regions local prevalence has reached 80%. CWD prions can be transmitted...
Authors
Gouda V. Mennatallah, Jim Powell, Jen McClure, Daniel P. Walsh, Daniel J. Storm

Genetic analysis of Missouri’s Topeka Shiners with implications for the propagation of understudied small-bodied freshwater fishes Genetic analysis of Missouri’s Topeka Shiners with implications for the propagation of understudied small-bodied freshwater fishes

Objective Best practices for conservation hatcheries to conserve genetic diversity and minimize adaptation to captivity have been established for decades, but how to apply them is not clear in every circumstance. As a growing number of aquatic species are propagated in captive settings, addressing the fit of these practices to each system will help managers operate optimally while...
Authors
Jessica Brooks, Leah K. Berkman, Meghan Zimmerschied, Douglas Novinger, Jerry Wiechman, Jacob Thomas Westhoff, Nathan L. Eckert, David D. Duvernell

Using peak geometry and shifts in the x-ray spectrum of carbon from electron probe microanalysis to determine thermal maturity of organic matter Using peak geometry and shifts in the x-ray spectrum of carbon from electron probe microanalysis to determine thermal maturity of organic matter

During the burial of mudstones, the associated organic matter undergoes gradual thermal maturation, a key process that can influence the reactivity of organic matter during catagenesis, the formation of hydrocarbon deposits and the chemical weathering of mudstones. Conventional methods for assessing the thermal maturity of organic matter often fail to reflect the geochemical...
Authors
Haolin Zhou, Gelu Costin, Justin E. Birdwell, Paul C. Hackley, Daniel Minisini, Tanguy Terlier, Mark A. Torres
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