Publications

This chapter focuses on meeting the need to produce neural network outputs that are physically consistent and also express uncertainties, a rare combination to date. It explains the effectiveness of physics-guided architecture - long-short-term-memory (PGA-LSTM) in achieving better generalizability and physical consistency over data collected from Lake Mendota in Wisconsin and Falling...

This article gives an overview of the heat fluxes between lakes and their environment. The heat budget of most lakes is dominated by heat fluxes at the lake surface, especially shortwave radiation, incoming and outgoing longwave radiation, and the latent heat flux. The seasonality of these fluxes is the most important driver for seasonal mixing processes in lakes. Changes in heat fluxes...

This chapter introduces a framework for combining scientific knowledge of physics-based models with neural networks to advance scientific discovery. It explains termed physics-guided neural networks (PGNN), leverages the output of physics-based model simulations along with observational features in a hybrid modeling setup to generate predictions using a neural network architecture. Data...

This chapter presents a physics-guided recurrent neural network model (PGRNN) for predicting water temperature in lake systems. Standard machine learning (ML) methods, especially deep learning models, often require a large amount of labeled training samples, which are often not available in scientific problems due to the substantial human labor and material costs associated with data...

We examine three distinctive biostratigraphic signatures associated with: hunting and gathering, landscape domestication, and globalisation. All three signatures have significant fossil records of regional importance that can be correlated inter-regionally and help describe the developing pattern of human expansion and appropriation of resources. While none have individual first or last

The dataset described here includes estimates of historical (1980–2020) daily surface water temperature, lake metadata, and daily weather conditions for lakes bigger than 4 ha in the conterminous United States (n = 185,549), and also in situ temperature observations for a subset of lakes (n = 12,227). Estimates were generated using a long short-term memory deep learning model and...

A key uncertainty of empirical models of post-fire tree mortality is understanding the drivers of elevated post-fire mortality several years following fire, known as delayed mortality. Delayed mortality can represent a substantial fraction of mortality, particularly for large trees that are a conservation focus in western US coniferous forests. Current post-fire tree mortality models...

Elevated concentrations and loads of nutrients in the South Platte River and Cherry Creek in Denver, Colorado, may have adverse effects on those streams and downstream water bodies, including increased production of algae, eutrophication, and decreased recreational opportunities. This article describes streamflow and concentrations and loads of nutrients for the South Platte River and...

Some introduced species cause severe damage, although the majority have little impact. Robust predictions of which species are most likely to cause substantial impacts could focus efforts to mitigate those impacts or prevent certain invasions entirely. Introduced herbivorous insects can reduce crop yield, fundamentally alter natural and managed forest ecosystems, and are unique among...

Disturbances to aquatic habitats are not uniformly distributed within the Great Lakes and acute effects can be strongest in nearshore areas where both landscape and within lake effects can have strong influence. Furthermore, different fish species respond to disturbances in different ways. A means to identify and evaluate locations and extent of disturbances that affect fish is needed...

Neonicotinoid insecticide use has increased over the last decade, including as agricultural seed treatments (application of chemical in a coating to the seed prior to planting). In California, multiple crops, including lettuce, can be grown using neonicotinoid treated seeds or receive a direct neonicotinoid soil application (drenching) at planting. Using research plots, this study...

A unique drone-based system for underwater mapping (bathymetry) was developed at the University of Florida. The system, called the “Bathy-drone”, comprises a drone that drags, via a tether, a small vessel on the water surface in a raster pattern. The vessel is equipped with a recreational commercial off-the-shelf (COTS) sonar unit that has down-scan, side-scan, and chirp capabilities and...