Publications

The PHREEQ-N-AMDTreat+REYs water-quality modeling tools have the fundamental capability to simulate aqueous chemical reactions and predict the formation of metal-rich solids during the treatment of acid mine drainage (AMD). These new user-friendly, publicly available tools were expanded from the PHREEQ-N-AMDTreat tools to include the precipitation of rare-earth elements plus yttrium...

Acid mine drainage (AMD) has been proposed by various researchers as a novel source of rare earth elements (REE), a group of elements that include critical metals for clean energy and modern technologies. REE tend to be sequestered in the Fe-Al-Mn-rich solids produced during the treatment of AMD. These solids are typically managed as waste, but could be a low-cost, readily available REE...

Reintroduction of an Eastern Migratory Population (EMP) of whooping cranes (Grus americana) in the United States by release of captive-reared individuals began in 2001. As of 2020, the EMP has approximately 21 breeding pairs and has had limited recruitment of wild-hatched individuals, thus captive-reared juveniles continue to be released into breeding areas in Wisconsin to maintain the...

Although there is extensive evidence of declines in the American Kestrel (Falco sparverius) population across North America, the cause of such declines remains a mystery. One hypothesized driver of decline is anticoagulant rodenticide (AR) exposure, which could potentially cause mortality or reduced fitness. We investigated AR exposure in wild American Kestrels in Utah, USA. We collected...

Tantalum has received considerable attention due to risks associated with its supply chain. In 2020 ∼70% of global tantalum supply originated in Africa, with 40% produced in the Democratic Republic of Congo alone. The United States has relied entirely on imports since the 1950s. However, quantifying total domestic consumption is problematic because refined tantalum compounds do not have...

Biologists routinely fit novel and complex statistical models to push the limits of our understanding. Examples include, but are not limited to, flexible Bayesian approaches (e.g. BUGS, stan), frequentist and likelihood-based approaches (e.g. packages lme4) and machine learning methods.These software and programs afford the user greater control and flexibility in tailoring complex...

Since 2002, the Woods Hole Coastal and Marine Science Center Samples Repository has been supporting U.S. Geological Survey research by providing secure storage for geological, geochemical, and biological samples, organizing and actively inventorying these sample collections, and providing researchers access to these scientific collections for study and reuse. Over the years, storage...

Understanding species' associations with physical habitat conditions is a fundamental goal of ecology. For organisms that occupy lotic ecosystems, relationships to streamflow are of particular importance, but these associations are unstudied for most species. We tested the predictability of fish–microhabitat relationships in river shoals (shallow, rocky areas with relatively swift water...

Best management practices (BMPs) have been predominantly used throughout the Chesapeake Bay watershed (CBW) to reduce nutrients and sediments entering streams, rivers, and the bay. These practices have been successful in reducing loads entering the estuary and have shown the potential to reduce other contaminants (pesticides, hormonally active compounds, pathogens) in localized studies...

Occurring globally, pockmarks are seafloor depressions associated with seabed fluid escape. Pockmark ubiquity and morphologic heterogeneity result in an irregular seafloor that can be difficult to quantitatively describe. To address this challenge, we test the hypothesis that deep-learning based object detection and segmentation can be used to develop data-driven models for pockmark...

Evaluation of sea-level rise (SLR) impacts on coastal landforms and habitats is a persistent need for informing coastal planning and management, including policy decisions, particularly those that balance human interests and habitat protection throughout the coastal zone. Bayesian networks (BNs) are used to model barrier island change under different SLR scenarios that are relevant to...

CoastalImageLib is a Python library that produces common coastal image products intended for quantitative analysis of coastal environments. This library contains functions to georectify and merge multiple oblique camera views, produce statistical image products for a given set of images, and create subsampled pixel instruments for use in bathymetric inversion, surface current estimation...