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Publications

Publications from USGS science centers throughout the Southeast Region.

Filter Total Items: 10379

Untargeted lipidomics for determining cellular and sub-cellular responses in Zebrafish (Danio rerio) liver cells following exposure to complex mixtures in U.S. streams Untargeted lipidomics for determining cellular and sub-cellular responses in Zebrafish (Danio rerio) liver cells following exposure to complex mixtures in U.S. streams

Surface waters often contain a variety of chemical contaminants potentially capable of producing adverse outcomes in both humans and wildlife due to impacts from industrial, urban, and agricultural activity. Here, we report the results of a zebrafish liver (ZFL) cell-based lipidomics approach to assess the potential ecotoxicological effects of complex contaminant mixtures using water...
Authors
Huajun Zhen, Quincy Teng, Jonathan D Mosley, Timothy W. Collette, Yang Yue, Paul M. Bradley, Drew R. Ekman

A hidden Markov model for estimating age-specific survival when age and size are uncertain A hidden Markov model for estimating age-specific survival when age and size are uncertain

Estimates of age-specific survival probabilities are needed for age-structured population models and to inform conservation decisions. However, determining the age of individuals in wildlife populations is often problematic. We present a hidden Markov model for estimating age-specific survival from capture–recapture or capture–recapture–recovery data when age is unknown and indicators of...
Authors
Timothy A. Gowan, Michael D. Tringali, Jeffrey A. Hostetler, Julien Martin, Leslie I. Ward-Geiger, Jennifer M Johnson

Remote and local drivers of Pleistocene South Asian summer monsoon precipitation: A test for future predictions Remote and local drivers of Pleistocene South Asian summer monsoon precipitation: A test for future predictions

South Asian precipitation amount and extreme variability are predicted to increase due to thermodynamic effects of increased 21st-century greenhouse gases, accompanied by an increased supply of moisture from the southern hemisphere Indian Ocean. We reconstructed South Asian summer monsoon precipitation and runoff into the Bay of Bengal to assess the extent to which these factors also...
Authors
Steven C Clemens, Masanobu Yamamoto, Kaustubh Thirumalai, Liviu Giosan, Julie N. Richey, Katrina Nilson-Kerr, Yair Rosenthal, Pallavi Anand, Sarah M McGrath

Water resources of St. Landry Parish, Louisiana Water resources of St. Landry Parish, Louisiana

Information concerning the availability, use, and quality of water in St. Landry Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. In 2014, about 116.75 million gallons per day (Mgal/d) of water were withdrawn...
Authors
Maxwell A. Lindaman, Vincent E. White

Online-coupling of widely-ranged timescales to model coral reef development Online-coupling of widely-ranged timescales to model coral reef development

The increasing pressure on Earth's ecosystems due to climate change is becoming more and more evident and the impacts of climate change are especially visible on coral reefs. Understanding how climate change interacts with the physical environment of reefs to impact coral growth and reef development is critically important to predicting the persistence of reefs into the future. In this...
Authors
Gijs Hendrickx, Peter M. J. Herman, Jasper T. Dijkstra, Curt D. Storlazzi, Lauren T. Toth

Impacts of sediment removal from and placement in coastal barrier island systems Impacts of sediment removal from and placement in coastal barrier island systems

Executive Summary On June 24, 2019, Congressman Raul Grijalva of Arizona, Chair of the House Committee on Natural Resources, sent a letter to the directors of the U.S. Fish and Wildlife Service and the U.S. Geological Survey to request their assistance in answering questions regarding coastal sediment resource management within the Coastal Barrier Resources System as defined by the...
Authors
Jennifer L. Miselis, James G. Flocks, Sara Zeigler, Davina Passeri, David R. Smith, Jill R. Bourque, Christopher R. Sherwood, Christopher G. Smith, Daniel J. Ciarletta, Kathryn E.L. Smith, Kristen Hart, David C. Kazyak, Alicia Berlin, Bianca Prohaska, Teresa Calleson, Kristi Yanchis

Use of dissolved oxygen monitoring to evaluate phosphorus loading in Connecticut streams, 2015–18 Use of dissolved oxygen monitoring to evaluate phosphorus loading in Connecticut streams, 2015–18

The Connecticut Department of Energy and Environmental Protection (CT DEEP) has developed an interim phosphorus reduction strategy to establish water-quality-based phosphorus limits in nontidal freshwaters for industrial and municipal water pollution control facilities. A recommendation in the strategy included the addition of diurnal dissolved oxygen (DO) sampling to the sampling of...
Authors
Brittney Izbicki, Jonathan Morrison

Synthetic aperture radar and optical mapping used to monitor change and replacement of Phragmites australis marsh in the Lower Mississippi River Delta, Louisiana Synthetic aperture radar and optical mapping used to monitor change and replacement of Phragmites australis marsh in the Lower Mississippi River Delta, Louisiana

Synthetic aperture radar (SAR) mapping of density as an enhancement of Phragmites australis optical live fractional cover (LFC) mapping was carried out in the lower Mississippi Delta during 2016 to 2019. Also, as part of the study, the replacement of P. australis with elephant-ear was analyzed. To that end, yearly maps from 2016 to 2019 of L-band SAR horizontal send, vertical receive (HV...
Authors
Elijah W. Ramsey III, Amina Rangoonwala

Improving species status assessments under the U.S. Endangered Species Act and implications for multispecies conservation challenges worldwide Improving species status assessments under the U.S. Endangered Species Act and implications for multispecies conservation challenges worldwide

Despite its successes, the U.S. Endangered Species Act (ESA) has proven challenging to implement due to funding limitations, workload backlog, and other problems. As threats to species survival intensify and as more species come under threat, the need for the ESA and similar conservation laws and policies in other countries to function efficiently has grown. Attempts by the U.S. Fish and...
Authors
Reed Noss, Jennifer M. Cartwright, Dwayne Estes, Theo Witsell, Gregg Elliott, Daniel S. Adams, Matthew A. Albrecht, Ryan Boyles, Patrick Comer, Chris Doffitt, JoVonn G. Hill, William C. Hunter, Wesley M. Knapp, Mike Marshall, Jason R. Singhurst, Christopher Tracey, Jeffrey L. Walck, Alan Weakley

Flow characteristics and salinity patterns in tidal rivers within the northern Ten Thousand Islands, southwest Florida, water years 2007–19 Flow characteristics and salinity patterns in tidal rivers within the northern Ten Thousand Islands, southwest Florida, water years 2007–19

Freshwater flow to the Ten Thousand Islands (TTI) estuary has been altered by the construction of the Tamiami Trail and construction of features in the now defunct Southern Golden Gate Estates development. This development included four associated canals that combine into the Faka Union Canal, which discharges into the TTI estuary. The Picayune Strand Restoration Project (PSRP) was...
Authors
Amanda C. Booth, Travis M. Knight

Initial estimates of net infiltration and irrigation from a soil-water-balance model of the Mississippi Embayment Regional Aquifer Study Area Initial estimates of net infiltration and irrigation from a soil-water-balance model of the Mississippi Embayment Regional Aquifer Study Area

The Mississippi embayment encompasses about 100,000 square miles and covers parts of eight States. In 2016, the U.S. Geological Survey began updating previous work for a part of the embayment known as the Mississippi Alluvial Plain to support informed water use and agricultural policy in the region. Groundwater, water use, economic, and other related models are being combined with field...
Authors
Stephen, M. Westenbroek, Martha G. Nielsen, David E. Ladd

Estimating the influence of oyster reef chains on freshwater detention at the estuary scale using Landsat-8 imagery Estimating the influence of oyster reef chains on freshwater detention at the estuary scale using Landsat-8 imagery

Oyster reef chains grow in response to local hydrodynamics and can redirect flows, particularly when reef chains grow perpendicular to freshwater flow paths. Singularly, oyster reef chains can act as porous dams that may facilitate nearshore accumulation of fresh or low-salinity water, in turn creating intermediate salinities that support oyster growth and estuarine conditions. However...
Authors
Alice Alonso, Natalie G. Nelson, Simeon Yurek, David Kaplan, Maitane Olabarrieta, Peter C Frederick
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