Brian Bergamaschi (Former Employee)
Science and Products
Filter Total Items: 22
Methylmercury and Low Dissolved Oxygen Events in Suisun Marsh
The primary purpose of the USGS portion of this proposed study is to evaluate if spectrophotometric and spectrofluorometric methods are useful for identifying organic sources of oxygen demand by analyzing water-quality samples (DO, BOD, Chl, SSC, Salinity, THg, MeHg) collected by other agencies and project participants. Sources to be evaluated include algal production, vegetation, soils, and...
Mercury and Dissolved Organic Matter in Delta Wetlands
Between 1860 and 1914, hydraulic mining activities sent more than 800,000,000 cubic yards of mercury-laden sediment into the Delta altering the landscape, water flows, and contributing to the leveeing and reclamation of the Delta's marshes. Transport of mercury from historic mining areas continues today. The sedimentary supply of mercury to the Delta and in Delta sediments (cinnabar, metacinnabar...
Sources of Disinfection Byproduct-forming Material in the State Water Project
Water from the Sacramento-San Joaquin Delta contains high concentrations of disinfection byproduct-forming (DBP-forming) materials when treated for potable use. DBPs form when dissolved organic compounds (DOC) in water react with disinfectants such as chlorine and ozone during the water-treatment process. The amount of DBPs that form is a function of the amount and source of the DOC, both of which...
High-Speed Mapping of Nutrient Distributions and Water Quality Survey - Lower South San Francisco Bay
This project aims to characterize spatial heterogeneity for key water quality parameters, and pilot the use of underway-flowthrough mapping of biogeochemical properties as a cost-effective approach to monitoring.
Dynamics of zooplankton in the Cache Slough Complex
Our purpose is to investigate what controls the distribution and abundance of fish prey within the Cache Slough Complex (CSC).
Phytoplankton production and nutrient transformations in shallow water wetland habitats
The objectives of this study are to quantify and characterize (1) phytoplankton production on Liberty Island, (2) utilization and transformation of nutrients, and (3) attenuation/loss of phytoplankton as the material is transported from Liberty Iisland into Cache Slough.
Interactions Between Physical Processes and Suspended Sediment Quality in Relation to Spawning Migrations of Delta Smelt
The proposed study is designed to better establish relationships between patterns of delta smelt abundance and properties of suspended particles as measured by optical and acoustical techniques.
Causes and Relevance of Phytoplankton Blooms in the Northern Sacramento-San Joaquin Delta
Phytoplankton are an important part of aquatic food webs and ecosystems. These single-celled plants grow faster in the stronger light of spring or summer, resulting in population explosions called phytoplankton blooms. These blooms in turn feed zooplankton (free-floating aquatic microorganisms), providing food for many aquatic species, including fish, shrimp, crabs, and other invertebrates.
Effects of Aquatic Vegetation on Water Quality and Residence Time in the Bay-Delta
The spread of invasive aquatic vegetation in the Sacramento-San Joaquin Delta is having a profound impact on the Delta’s natural habitat. The presence of these “aquatic weeds” has been shown to alter water velocity and increase water clarity, posing threats to native fish species, specifically the threatened Delta Smelt. These aquatic plants can also affect the foodweb by altering nutrient...
Transport of dissolved organic matter by river networks from mountains to the sea: a re-examination of the role of flow across temporal and spatial scales
The transport of dissolved organic matter (DOM) by rivers is an important component of the global carbon cycle, affects ecosystems and water quality, and reflects biogeochemical and hydrological processes in watersheds. Understanding the fundamental relationships between discharge and DOM concentration and composition reveals important information about watershed flow paths, soil...
Filter Total Items: 26
Assessing spatial variability of nutrients, phytoplankton, and related water quality constituents in the California Sacramento-San Joaquin Delta related to the 2015 installation of the False River Emergency Drought Barrier: 2015 and 2016 high-resolution m Assessing spatial variability of nutrients, phytoplankton, and related water quality constituents in the California Sacramento-San Joaquin Delta related to the 2015 installation of the False River Emergency Drought Barrier: 2015 and 2016 high-resolution m
This data release documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the western and central portion of the Sacramento-San Joaquin River Delta of California, USA. The data set includes water residence time, nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen...
High resolution and discrete temporal and spatial water-quality measurements in support of modeling mercury and methylmercury concentrations in surface waters of the Sacramento-San Joaquin River Delta High resolution and discrete temporal and spatial water-quality measurements in support of modeling mercury and methylmercury concentrations in surface waters of the Sacramento-San Joaquin River Delta
The Sacramento / San Joaquin River Delta (SSJRD) is contaminated with legacy mercury (Hg) from historical mining and mineral processing activities throughout the watershed, as well as from contemporary atmospheric and industrial inputs. The current project was designed for the purpose of developing high-resolution spatial and temporal models for estimating concentrations of mercury...
Concentration Data for 12 Elements of Concern Used in the Development of Surrogate Models for Estimating Elemental Concentrations in Surface Water of Three Hydrologic Basins (Delaware River, Illinois River and Upper Colorado River) Concentration Data for 12 Elements of Concern Used in the Development of Surrogate Models for Estimating Elemental Concentrations in Surface Water of Three Hydrologic Basins (Delaware River, Illinois River and Upper Colorado River)
The release of metals (or metalloids) to surface water can involve both natural and anthropogenic sources. Elevated metals concentrations can pose a risk to human health, wildlife, and ecosystem health, with the modes of toxicity and extent of risk varying as a function of the specific metal, its chemical form and the matrix with which it is associated (for example, dissolved versus...
Tidal hydrologic and constitutent loads from First Mallard Water Quality Station in the Rush Ranch Marsh Complex of the San Francisco Bay Estuarine Research Reserve (SFBNERR) 2016-2018 Tidal hydrologic and constitutent loads from First Mallard Water Quality Station in the Rush Ranch Marsh Complex of the San Francisco Bay Estuarine Research Reserve (SFBNERR) 2016-2018
The data herein report continuous field measurements and specific discrete sampling events associated with water quality and carbon consitutents - both dissolved and particulate forms. These data were coupled with atmospheric flux measurements during the 2017-18 water year to estimate the net storage of fixed carbon within the marsh on an areal basis. Direct and indirect measurement...
Characterization of water residence time, nutrients, phytoplankton and related water quality constituents in the Cache Slough Complex of the California Sacramento-San Joaquin Delta in 2017 and 2018 Characterization of water residence time, nutrients, phytoplankton and related water quality constituents in the Cache Slough Complex of the California Sacramento-San Joaquin Delta in 2017 and 2018
Data was collected in the Cache Slough Complex located in the northern San Francisco Estuary to characterize water quality parameters at high spatial resolution. Data collection was conducted on three separate occasions: October 2017, May 2018, and October 2018. Data set includes nitrate, ammonium, ortho-phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen...
Optical signals of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water of Great Lake tributaries from 2011 to 2016 Optical signals of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water of Great Lake tributaries from 2011 to 2016
Data are from water samples collected from tributaries of the Great Lakes at three different drainage basin scales, including 1). watershed scale: 8 tributaries of the Great Lakes, 2). subwatershed scale: 5 locations from the greater Milwaukee, Wisconsin area, and 3). small scale: 213 storm sewers and open channel locations in three subwatersheds within the Great Lakes Basin including...
Spatial assessment of nutrients and water-quality constituents in Suisun Marsh with the salinity control gate reoperation experiment; a Delta Smelt Resiliency Strategy experiment 2018 Spatial assessment of nutrients and water-quality constituents in Suisun Marsh with the salinity control gate reoperation experiment; a Delta Smelt Resiliency Strategy experiment 2018
This data release documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in Suisun Marsh and Suisun Bay in the San Francisco Estuary of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, chlorophyll, blue-green algal...
Assessment of water-quality in the California Sacramento-San Joaquin Delta during a North Delta directed flow action: August - October 2018 Assessment of water-quality in the California Sacramento-San Joaquin Delta during a North Delta directed flow action: August - October 2018
This report documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta in the Sacramento-San Joaquin River Delta of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, and chlorophyll . Data-collection...
Assessment of nutrients and water-quality constituents in the North Delta during Yolo Bypass flooding events in March 2017 Assessment of nutrients and water-quality constituents in the North Delta during Yolo Bypass flooding events in March 2017
The data release contains data for the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta in the Sacramento-San Joaquin River Delta of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, and chlorophyll. Data...
Assessment of nutrients and water-quality constituents at the Sacramento-San Joaquin River Confluence during a phytoplankton bloom in July 2017 Assessment of nutrients and water-quality constituents at the Sacramento-San Joaquin River Confluence during a phytoplankton bloom in July 2017
This report documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta in the Sacramento-San Joaquin River Delta of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, and chlorophyll. Data-collection were...
High-Resolution Measurements to Identify Effects of Aquatic Vegetation on Water Quality and Stratification High-Resolution Measurements to Identify Effects of Aquatic Vegetation on Water Quality and Stratification
The dataset documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta of the Sacramento-San Joaquin River Delta of California, USA. The dataset includes surface mapping, depth profile, and discrete data for nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved...
Assessing spatial variability of nutrients and related water quality constituents in the California Sacramento-San Joaquin Delta at the landscape scale: 2018 High resolution mapping surveys (ver. 2.0, October 2023) Assessing spatial variability of nutrients and related water quality constituents in the California Sacramento-San Joaquin Delta at the landscape scale: 2018 High resolution mapping surveys (ver. 2.0, October 2023)
The dataset documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta, Central Delta, and the Western Delta out to Suisun Bay in the Sacramento-San Joaquin River Delta of California, USA. The dataset includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved...
Filter Total Items: 111
Combining eddy covariance and chamber methods to better constrain CO2 and CH4 fluxes across a heterogeneous restored tidal wetland Combining eddy covariance and chamber methods to better constrain CO2 and CH4 fluxes across a heterogeneous restored tidal wetland
Tidal wetlands play an important role in global carbon cycling by storing carbon in sediment at millennial time scales, transporting dissolved carbon into coastal waters, and contributing significantly to global CH4 budgets. However, these ecosystems' greenhouse gas monitoring and predictions are challenging due to spatial heterogeneity and tidal flooding. We utilized eddy covariance and...
Authors
Julie Shahan, Housen Chu, Lisamarie Windham-Myers, Maiyah Matsumura, Joseph Carlin, Elke Eichelmann, Ellen J Goodrich-Stuart, Brian A. Bergamaschi, Kyle Kensuke Nakatsuka, Patty Oikawa, Cove Sturtevant
Carbon flux, storage, and wildlife co-benefits in a restoring estuary Carbon flux, storage, and wildlife co-benefits in a restoring estuary
Tidal marsh restorations may result in transitional mudflat habitats depending on hydrological and geomorphological conditions. Compared to tidal marsh, mudflats are thought to have limited value for carbon sequestration, carbon storage, and foraging benefits for salmon. We evaluated greenhouse gas exchange, sediment carbon storage, and invertebrate production at restoration and...
Authors
Isa Woo, Melanie J. Davis, Susan E.W. De La Cruz, Lisamarie Windham-Myers, Judith Z. Drexler, Kristin B. Byrd, Ellen Stuart-Haëntjens, Frank E Anderson, Brian A. Bergamaschi, Glynnis Nakai, Christopher S. Ellings, Sayre Hodgson
Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales
Relations between spectral absorbance and fluorescence properties of water and human-associated and fecal indicator bacteria were developed for facilitating field sensor applications to estimate wastewater contamination in waterways. Leaking wastewater conveyance infrastructure commonly contaminates receiving waters. Methods to quantify such contamination can be time consuming, expensive...
Authors
Steven R. Corsi, Laura A. DeCicco, Angela Hansen, Peter L. Lenaker, Brian A. Bergamaschi, Brian A. Pellerin, Debra Dila, Melinda Bootsma, Susan Spencer, Mark A. Borchardt, Sandra L. McLellan
Changing nitrogen inputs to the northern San Francisco Estuary: Potential ecosystem responses and opportunities for investigation Changing nitrogen inputs to the northern San Francisco Estuary: Potential ecosystem responses and opportunities for investigation
Anthropogenic activities have resulted in elevated ambient nitrogen (N) and phosphorus (P) concentrations in many regions of the Sacramento-San Joaquin Delta and Suisun Bay (northern San Francisco Estuary, (nSFE). The Sacramento Regional wastewater treatment plant (SRWTP WWTP) currently acts as the largest N point source to the system, discharging 13,000-15,000 kg/d of ammonium-N (NH4)...
Authors
David Senn, Tamara E. C. Kraus, Amy Richey, Brian A. Bergamaschi, Larry R. Brown, Louise Conrad, Christopher A. Francis, Wim Kimmerer, Raphael Kudela, Timothy G. Otten, Alexander E. Parker, April Robinson, Anke Mueller-Solger, Dylan Stern, Janet Thompson
Trihalomethane precursors: Land use hot spots, persistence during transport, and management options Trihalomethane precursors: Land use hot spots, persistence during transport, and management options
To meet drinking water regulations, rather than investing in costly treatment plant operations, managers can look for ways to improve source water quality; this requires understanding watershed sources and fates of constituents of concern. Trihalomethanes (THMs) are one of the major classes of regulated disinfection byproducts, formed when a specific fraction of the organic carbon pool...
Authors
Robert S. Eckard, Brian A. Bergamaschi, Brian A. Pellerin, Tamara E. C. Kraus, Peter J. Hernes
Hydrologic export is a major component of coastal wetland carbon budgets Hydrologic export is a major component of coastal wetland carbon budgets
Coastal wetlands are among the most productive habitats on Earth and sequester globally significant amounts of atmospheric carbon (C). Extreme rates of soil C accumulation are widely assumed to reflect efficient C storage. Yet the fraction of wetland C lost via hydrologic export has not been directly quantified, since comprehensive budgets including direct estimates of lateral C loss are...
Authors
Matthew Bogard, Brian A. Bergamaschi, David Butman, Frank Anderson, Sara Knox, Lisamarie Windham-Myers
Tidal wetland gross primary production across the continental United States, 2000–2019 Tidal wetland gross primary production across the continental United States, 2000–2019
We mapped tidal wetland gross primary production (GPP) with unprecedented detail for multiple wetland types across the continental United States (CONUS) at 16‐day intervals for the years 2000–2019. To accomplish this task, we developed the spatially explicit Blue Carbon (BC) model, which combined tidal wetland cover and field‐based eddy covariance tower data into a single Bayesian...
Authors
R.A. Feagin, I. Forbrich, T. P. Huff, J.G. Barr, J. Ruiz-Plancarte, J.D. Fuentes, R.G. Najjar, R. Vargas, A. Vazquez Lule, L. Windham-Myers, Kevin D. Kroeger, E. J. Ward, G. W. Moore, M. Leclerc, K. W. Krauss, C.L. Stagg, M. Alber, S. H. Knox, K. V. R. Schafer, T.S. Bianchi, J. A. Hutchings, H. Nahrawi, A. Noormets, B. Mitra, A. Jaimes, A.L. Hinson, Brian A. Bergamaschi, J.S. King, G. Miao
The use of stable isotope-based water age to evaluate a hydrodynamic model The use of stable isotope-based water age to evaluate a hydrodynamic model
Transport time scales are common metrics of the strength of transport processes. Water age is the time elapsed since water from a specific source has entered a study area. An observational method to estimate water age relies on the progressive concentration of the heavier isotopes of hydrogen and oxygen in water that occurs during evaporation. The isotopic composition is used to derive...
Authors
Edward Gross, Stephen Andrews, Brian A. Bergamaschi, Bryan D. Downing, Rusty Holleman, Scott Burdick, John Durand
Spatial variability of phytoplankton in a shallow tidal freshwater system reveals complex controls on abundance and community structure Spatial variability of phytoplankton in a shallow tidal freshwater system reveals complex controls on abundance and community structure
Estuaries worldwide are undergoing changes to patterns of aquatic productivity because of human activities that alter flow, impact sediment delivery and thus the light field, and contribute nutrients and contaminants like pesticides and metals. These changes can influence phytoplankton communities, which in turn can alter estuarine food webs. We used multiple approaches-including high...
Authors
Elizabeth B. Stumpner, Brian A. Bergamaschi, Tamara E. C. Kraus, Alexander Parker, Francis Wilkerson, Bryan D. Downing, Richard Dugdale, Michael T. Murrell, Kurt D. Carpenter, James Orlando, Carol Kendall
Zooplankton dynamics in the Cache Slough complex of the upper San Francisco Estuary Zooplankton dynamics in the Cache Slough complex of the upper San Francisco Estuary
We studied abundance and dynamics of zooplankton in the tidal freshwater Cache Slough Complex (CSC) in the northern Delta of the San Francisco Estuary during June, July, and October 2015. We asked whether the CSC was an area of high zooplankton production that could act as a source region for open waters of the estuary. Abundance of the copepod Pseudodiaptomus forbesi was similar to that...
Authors
Wim Kimmerer, Toni R. Ignoffo, Brooke Bemowski, Julien Moderan, Ann E. Holmes, Brian A. Bergamaschi
Procedures for using the Horiba Scientific Aqualog® fluorometer to measure absorbance and fluorescence from dissolved organic matter Procedures for using the Horiba Scientific Aqualog® fluorometer to measure absorbance and fluorescence from dissolved organic matter
Advances in spectroscopic techniques have led to an increase in the use of optical measurements (absorbance and fluorescence) to assess dissolved organic matter composition and infer sources and processing. Although optical measurements are easy to make, they can be affected by many variables rendering them less comparable, including by inconsistencies in sample collection (for example...
Authors
Angela M. Hansen, Jacob Fleck, Tamara E. C. Kraus, Bryan D. Downing, Travis von Dessonneck, Brian A. Bergamaschi
Direct and indirect effects of tides on ecosystem-scale CO2 exchange in a brackish tidal marsh in Northern California Direct and indirect effects of tides on ecosystem-scale CO2 exchange in a brackish tidal marsh in Northern California
We investigated the direct and indirect influence of tides on net ecosystem exchange (NEE) of carbon dioxide (CO2) in a temperate brackish tidal marsh. NEE displayed a tidally driven pattern with obvious characteristics at the multiday scale, with greater net CO2uptake during spring tides than neap tides. Based on the relative mutual information between NEE and biophysical variables...
Authors
Sara Knox, Lisamarie Windham-Myers, Frank Anderson, Cove Sturtevant, Brian A. Bergamaschi
Non-USGS Publications**
Bergamaschi, B.A. and Hedges, J.I. (1995) A Multichambered Apparatus for HF Solvolysis Experiments - Reaction of Cellulose HF Solvolysis Products with Acetic-Acid and Acetic-Anhydride. Carbohydrate Research 267, 115-126. https://doi.org/10.1016/0008-6215(94)00279-O
Hedges, J.I., Bergamaschi, B.A. and Benner, R. (1994) Comparative Analyses of DOC and DON in Natural Water - Erratum (Vol 41, Pg 121, 1989). Marine Chemistry 46, 407-408. https://doi.org/10.1016/0304-4203(94)90035-3
Hedges, J.I., Bergamaschi, B.A. and Benner, R. (1993) Comparative Analyses of DOC and DON in Natural Water. Marine Chemistry 41, 121-134. https://doi.org/10.1016/0304-4203(93)90110-A
Hopkinson, C., Cifuentes, L., Burdige, D., Fitzwater, S., Hansell, D., Henrichs, S., Kahler, P., Koike, I., Walsh, T. and Bergamaschi, B. (1993) Measurement of Dissolved Organic Carbon and Nitrogen in Natural Waters - DON Subgroup Report. Marine Chemistry 41, 23-36. https://doi.org/10.1016/0304-4203(93)90103-U
Hedges, J.I. and Bergamaschi, B.A. (1992) Seawater Carbon Measurement. Nature 359, 202-202. https://doi.org/DOI 10.1038/359202a0
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Science and Products
Filter Total Items: 22
Methylmercury and Low Dissolved Oxygen Events in Suisun Marsh
The primary purpose of the USGS portion of this proposed study is to evaluate if spectrophotometric and spectrofluorometric methods are useful for identifying organic sources of oxygen demand by analyzing water-quality samples (DO, BOD, Chl, SSC, Salinity, THg, MeHg) collected by other agencies and project participants. Sources to be evaluated include algal production, vegetation, soils, and...
Mercury and Dissolved Organic Matter in Delta Wetlands
Between 1860 and 1914, hydraulic mining activities sent more than 800,000,000 cubic yards of mercury-laden sediment into the Delta altering the landscape, water flows, and contributing to the leveeing and reclamation of the Delta's marshes. Transport of mercury from historic mining areas continues today. The sedimentary supply of mercury to the Delta and in Delta sediments (cinnabar, metacinnabar...
Sources of Disinfection Byproduct-forming Material in the State Water Project
Water from the Sacramento-San Joaquin Delta contains high concentrations of disinfection byproduct-forming (DBP-forming) materials when treated for potable use. DBPs form when dissolved organic compounds (DOC) in water react with disinfectants such as chlorine and ozone during the water-treatment process. The amount of DBPs that form is a function of the amount and source of the DOC, both of which...
High-Speed Mapping of Nutrient Distributions and Water Quality Survey - Lower South San Francisco Bay
This project aims to characterize spatial heterogeneity for key water quality parameters, and pilot the use of underway-flowthrough mapping of biogeochemical properties as a cost-effective approach to monitoring.
Dynamics of zooplankton in the Cache Slough Complex
Our purpose is to investigate what controls the distribution and abundance of fish prey within the Cache Slough Complex (CSC).
Phytoplankton production and nutrient transformations in shallow water wetland habitats
The objectives of this study are to quantify and characterize (1) phytoplankton production on Liberty Island, (2) utilization and transformation of nutrients, and (3) attenuation/loss of phytoplankton as the material is transported from Liberty Iisland into Cache Slough.
Interactions Between Physical Processes and Suspended Sediment Quality in Relation to Spawning Migrations of Delta Smelt
The proposed study is designed to better establish relationships between patterns of delta smelt abundance and properties of suspended particles as measured by optical and acoustical techniques.
Causes and Relevance of Phytoplankton Blooms in the Northern Sacramento-San Joaquin Delta
Phytoplankton are an important part of aquatic food webs and ecosystems. These single-celled plants grow faster in the stronger light of spring or summer, resulting in population explosions called phytoplankton blooms. These blooms in turn feed zooplankton (free-floating aquatic microorganisms), providing food for many aquatic species, including fish, shrimp, crabs, and other invertebrates.
Effects of Aquatic Vegetation on Water Quality and Residence Time in the Bay-Delta
The spread of invasive aquatic vegetation in the Sacramento-San Joaquin Delta is having a profound impact on the Delta’s natural habitat. The presence of these “aquatic weeds” has been shown to alter water velocity and increase water clarity, posing threats to native fish species, specifically the threatened Delta Smelt. These aquatic plants can also affect the foodweb by altering nutrient...
Transport of dissolved organic matter by river networks from mountains to the sea: a re-examination of the role of flow across temporal and spatial scales
The transport of dissolved organic matter (DOM) by rivers is an important component of the global carbon cycle, affects ecosystems and water quality, and reflects biogeochemical and hydrological processes in watersheds. Understanding the fundamental relationships between discharge and DOM concentration and composition reveals important information about watershed flow paths, soil...
Filter Total Items: 26
Assessing spatial variability of nutrients, phytoplankton, and related water quality constituents in the California Sacramento-San Joaquin Delta related to the 2015 installation of the False River Emergency Drought Barrier: 2015 and 2016 high-resolution m Assessing spatial variability of nutrients, phytoplankton, and related water quality constituents in the California Sacramento-San Joaquin Delta related to the 2015 installation of the False River Emergency Drought Barrier: 2015 and 2016 high-resolution m
This data release documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the western and central portion of the Sacramento-San Joaquin River Delta of California, USA. The data set includes water residence time, nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen...
High resolution and discrete temporal and spatial water-quality measurements in support of modeling mercury and methylmercury concentrations in surface waters of the Sacramento-San Joaquin River Delta High resolution and discrete temporal and spatial water-quality measurements in support of modeling mercury and methylmercury concentrations in surface waters of the Sacramento-San Joaquin River Delta
The Sacramento / San Joaquin River Delta (SSJRD) is contaminated with legacy mercury (Hg) from historical mining and mineral processing activities throughout the watershed, as well as from contemporary atmospheric and industrial inputs. The current project was designed for the purpose of developing high-resolution spatial and temporal models for estimating concentrations of mercury...
Concentration Data for 12 Elements of Concern Used in the Development of Surrogate Models for Estimating Elemental Concentrations in Surface Water of Three Hydrologic Basins (Delaware River, Illinois River and Upper Colorado River) Concentration Data for 12 Elements of Concern Used in the Development of Surrogate Models for Estimating Elemental Concentrations in Surface Water of Three Hydrologic Basins (Delaware River, Illinois River and Upper Colorado River)
The release of metals (or metalloids) to surface water can involve both natural and anthropogenic sources. Elevated metals concentrations can pose a risk to human health, wildlife, and ecosystem health, with the modes of toxicity and extent of risk varying as a function of the specific metal, its chemical form and the matrix with which it is associated (for example, dissolved versus...
Tidal hydrologic and constitutent loads from First Mallard Water Quality Station in the Rush Ranch Marsh Complex of the San Francisco Bay Estuarine Research Reserve (SFBNERR) 2016-2018 Tidal hydrologic and constitutent loads from First Mallard Water Quality Station in the Rush Ranch Marsh Complex of the San Francisco Bay Estuarine Research Reserve (SFBNERR) 2016-2018
The data herein report continuous field measurements and specific discrete sampling events associated with water quality and carbon consitutents - both dissolved and particulate forms. These data were coupled with atmospheric flux measurements during the 2017-18 water year to estimate the net storage of fixed carbon within the marsh on an areal basis. Direct and indirect measurement...
Characterization of water residence time, nutrients, phytoplankton and related water quality constituents in the Cache Slough Complex of the California Sacramento-San Joaquin Delta in 2017 and 2018 Characterization of water residence time, nutrients, phytoplankton and related water quality constituents in the Cache Slough Complex of the California Sacramento-San Joaquin Delta in 2017 and 2018
Data was collected in the Cache Slough Complex located in the northern San Francisco Estuary to characterize water quality parameters at high spatial resolution. Data collection was conducted on three separate occasions: October 2017, May 2018, and October 2018. Data set includes nitrate, ammonium, ortho-phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen...
Optical signals of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water of Great Lake tributaries from 2011 to 2016 Optical signals of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water of Great Lake tributaries from 2011 to 2016
Data are from water samples collected from tributaries of the Great Lakes at three different drainage basin scales, including 1). watershed scale: 8 tributaries of the Great Lakes, 2). subwatershed scale: 5 locations from the greater Milwaukee, Wisconsin area, and 3). small scale: 213 storm sewers and open channel locations in three subwatersheds within the Great Lakes Basin including...
Spatial assessment of nutrients and water-quality constituents in Suisun Marsh with the salinity control gate reoperation experiment; a Delta Smelt Resiliency Strategy experiment 2018 Spatial assessment of nutrients and water-quality constituents in Suisun Marsh with the salinity control gate reoperation experiment; a Delta Smelt Resiliency Strategy experiment 2018
This data release documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in Suisun Marsh and Suisun Bay in the San Francisco Estuary of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, chlorophyll, blue-green algal...
Assessment of water-quality in the California Sacramento-San Joaquin Delta during a North Delta directed flow action: August - October 2018 Assessment of water-quality in the California Sacramento-San Joaquin Delta during a North Delta directed flow action: August - October 2018
This report documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta in the Sacramento-San Joaquin River Delta of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, and chlorophyll . Data-collection...
Assessment of nutrients and water-quality constituents in the North Delta during Yolo Bypass flooding events in March 2017 Assessment of nutrients and water-quality constituents in the North Delta during Yolo Bypass flooding events in March 2017
The data release contains data for the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta in the Sacramento-San Joaquin River Delta of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, and chlorophyll. Data...
Assessment of nutrients and water-quality constituents at the Sacramento-San Joaquin River Confluence during a phytoplankton bloom in July 2017 Assessment of nutrients and water-quality constituents at the Sacramento-San Joaquin River Confluence during a phytoplankton bloom in July 2017
This report documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta in the Sacramento-San Joaquin River Delta of California, USA. The data set includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved oxygen, turbidity, and chlorophyll. Data-collection were...
High-Resolution Measurements to Identify Effects of Aquatic Vegetation on Water Quality and Stratification High-Resolution Measurements to Identify Effects of Aquatic Vegetation on Water Quality and Stratification
The dataset documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta of the Sacramento-San Joaquin River Delta of California, USA. The dataset includes surface mapping, depth profile, and discrete data for nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved...
Assessing spatial variability of nutrients and related water quality constituents in the California Sacramento-San Joaquin Delta at the landscape scale: 2018 High resolution mapping surveys (ver. 2.0, October 2023) Assessing spatial variability of nutrients and related water quality constituents in the California Sacramento-San Joaquin Delta at the landscape scale: 2018 High resolution mapping surveys (ver. 2.0, October 2023)
The dataset documents the spatial and temporal variability of nutrients and related water quality parameters at high spatial resolution in the North Delta, Central Delta, and the Western Delta out to Suisun Bay in the Sacramento-San Joaquin River Delta of California, USA. The dataset includes nitrate, ammonium, phosphate, dissolved organic carbon, temperature, conductivity, dissolved...
Filter Total Items: 111
Combining eddy covariance and chamber methods to better constrain CO2 and CH4 fluxes across a heterogeneous restored tidal wetland Combining eddy covariance and chamber methods to better constrain CO2 and CH4 fluxes across a heterogeneous restored tidal wetland
Tidal wetlands play an important role in global carbon cycling by storing carbon in sediment at millennial time scales, transporting dissolved carbon into coastal waters, and contributing significantly to global CH4 budgets. However, these ecosystems' greenhouse gas monitoring and predictions are challenging due to spatial heterogeneity and tidal flooding. We utilized eddy covariance and...
Authors
Julie Shahan, Housen Chu, Lisamarie Windham-Myers, Maiyah Matsumura, Joseph Carlin, Elke Eichelmann, Ellen J Goodrich-Stuart, Brian A. Bergamaschi, Kyle Kensuke Nakatsuka, Patty Oikawa, Cove Sturtevant
Carbon flux, storage, and wildlife co-benefits in a restoring estuary Carbon flux, storage, and wildlife co-benefits in a restoring estuary
Tidal marsh restorations may result in transitional mudflat habitats depending on hydrological and geomorphological conditions. Compared to tidal marsh, mudflats are thought to have limited value for carbon sequestration, carbon storage, and foraging benefits for salmon. We evaluated greenhouse gas exchange, sediment carbon storage, and invertebrate production at restoration and...
Authors
Isa Woo, Melanie J. Davis, Susan E.W. De La Cruz, Lisamarie Windham-Myers, Judith Z. Drexler, Kristin B. Byrd, Ellen Stuart-Haëntjens, Frank E Anderson, Brian A. Bergamaschi, Glynnis Nakai, Christopher S. Ellings, Sayre Hodgson
Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales
Relations between spectral absorbance and fluorescence properties of water and human-associated and fecal indicator bacteria were developed for facilitating field sensor applications to estimate wastewater contamination in waterways. Leaking wastewater conveyance infrastructure commonly contaminates receiving waters. Methods to quantify such contamination can be time consuming, expensive...
Authors
Steven R. Corsi, Laura A. DeCicco, Angela Hansen, Peter L. Lenaker, Brian A. Bergamaschi, Brian A. Pellerin, Debra Dila, Melinda Bootsma, Susan Spencer, Mark A. Borchardt, Sandra L. McLellan
Changing nitrogen inputs to the northern San Francisco Estuary: Potential ecosystem responses and opportunities for investigation Changing nitrogen inputs to the northern San Francisco Estuary: Potential ecosystem responses and opportunities for investigation
Anthropogenic activities have resulted in elevated ambient nitrogen (N) and phosphorus (P) concentrations in many regions of the Sacramento-San Joaquin Delta and Suisun Bay (northern San Francisco Estuary, (nSFE). The Sacramento Regional wastewater treatment plant (SRWTP WWTP) currently acts as the largest N point source to the system, discharging 13,000-15,000 kg/d of ammonium-N (NH4)...
Authors
David Senn, Tamara E. C. Kraus, Amy Richey, Brian A. Bergamaschi, Larry R. Brown, Louise Conrad, Christopher A. Francis, Wim Kimmerer, Raphael Kudela, Timothy G. Otten, Alexander E. Parker, April Robinson, Anke Mueller-Solger, Dylan Stern, Janet Thompson
Trihalomethane precursors: Land use hot spots, persistence during transport, and management options Trihalomethane precursors: Land use hot spots, persistence during transport, and management options
To meet drinking water regulations, rather than investing in costly treatment plant operations, managers can look for ways to improve source water quality; this requires understanding watershed sources and fates of constituents of concern. Trihalomethanes (THMs) are one of the major classes of regulated disinfection byproducts, formed when a specific fraction of the organic carbon pool...
Authors
Robert S. Eckard, Brian A. Bergamaschi, Brian A. Pellerin, Tamara E. C. Kraus, Peter J. Hernes
Hydrologic export is a major component of coastal wetland carbon budgets Hydrologic export is a major component of coastal wetland carbon budgets
Coastal wetlands are among the most productive habitats on Earth and sequester globally significant amounts of atmospheric carbon (C). Extreme rates of soil C accumulation are widely assumed to reflect efficient C storage. Yet the fraction of wetland C lost via hydrologic export has not been directly quantified, since comprehensive budgets including direct estimates of lateral C loss are...
Authors
Matthew Bogard, Brian A. Bergamaschi, David Butman, Frank Anderson, Sara Knox, Lisamarie Windham-Myers
Tidal wetland gross primary production across the continental United States, 2000–2019 Tidal wetland gross primary production across the continental United States, 2000–2019
We mapped tidal wetland gross primary production (GPP) with unprecedented detail for multiple wetland types across the continental United States (CONUS) at 16‐day intervals for the years 2000–2019. To accomplish this task, we developed the spatially explicit Blue Carbon (BC) model, which combined tidal wetland cover and field‐based eddy covariance tower data into a single Bayesian...
Authors
R.A. Feagin, I. Forbrich, T. P. Huff, J.G. Barr, J. Ruiz-Plancarte, J.D. Fuentes, R.G. Najjar, R. Vargas, A. Vazquez Lule, L. Windham-Myers, Kevin D. Kroeger, E. J. Ward, G. W. Moore, M. Leclerc, K. W. Krauss, C.L. Stagg, M. Alber, S. H. Knox, K. V. R. Schafer, T.S. Bianchi, J. A. Hutchings, H. Nahrawi, A. Noormets, B. Mitra, A. Jaimes, A.L. Hinson, Brian A. Bergamaschi, J.S. King, G. Miao
The use of stable isotope-based water age to evaluate a hydrodynamic model The use of stable isotope-based water age to evaluate a hydrodynamic model
Transport time scales are common metrics of the strength of transport processes. Water age is the time elapsed since water from a specific source has entered a study area. An observational method to estimate water age relies on the progressive concentration of the heavier isotopes of hydrogen and oxygen in water that occurs during evaporation. The isotopic composition is used to derive...
Authors
Edward Gross, Stephen Andrews, Brian A. Bergamaschi, Bryan D. Downing, Rusty Holleman, Scott Burdick, John Durand
Spatial variability of phytoplankton in a shallow tidal freshwater system reveals complex controls on abundance and community structure Spatial variability of phytoplankton in a shallow tidal freshwater system reveals complex controls on abundance and community structure
Estuaries worldwide are undergoing changes to patterns of aquatic productivity because of human activities that alter flow, impact sediment delivery and thus the light field, and contribute nutrients and contaminants like pesticides and metals. These changes can influence phytoplankton communities, which in turn can alter estuarine food webs. We used multiple approaches-including high...
Authors
Elizabeth B. Stumpner, Brian A. Bergamaschi, Tamara E. C. Kraus, Alexander Parker, Francis Wilkerson, Bryan D. Downing, Richard Dugdale, Michael T. Murrell, Kurt D. Carpenter, James Orlando, Carol Kendall
Zooplankton dynamics in the Cache Slough complex of the upper San Francisco Estuary Zooplankton dynamics in the Cache Slough complex of the upper San Francisco Estuary
We studied abundance and dynamics of zooplankton in the tidal freshwater Cache Slough Complex (CSC) in the northern Delta of the San Francisco Estuary during June, July, and October 2015. We asked whether the CSC was an area of high zooplankton production that could act as a source region for open waters of the estuary. Abundance of the copepod Pseudodiaptomus forbesi was similar to that...
Authors
Wim Kimmerer, Toni R. Ignoffo, Brooke Bemowski, Julien Moderan, Ann E. Holmes, Brian A. Bergamaschi
Procedures for using the Horiba Scientific Aqualog® fluorometer to measure absorbance and fluorescence from dissolved organic matter Procedures for using the Horiba Scientific Aqualog® fluorometer to measure absorbance and fluorescence from dissolved organic matter
Advances in spectroscopic techniques have led to an increase in the use of optical measurements (absorbance and fluorescence) to assess dissolved organic matter composition and infer sources and processing. Although optical measurements are easy to make, they can be affected by many variables rendering them less comparable, including by inconsistencies in sample collection (for example...
Authors
Angela M. Hansen, Jacob Fleck, Tamara E. C. Kraus, Bryan D. Downing, Travis von Dessonneck, Brian A. Bergamaschi
Direct and indirect effects of tides on ecosystem-scale CO2 exchange in a brackish tidal marsh in Northern California Direct and indirect effects of tides on ecosystem-scale CO2 exchange in a brackish tidal marsh in Northern California
We investigated the direct and indirect influence of tides on net ecosystem exchange (NEE) of carbon dioxide (CO2) in a temperate brackish tidal marsh. NEE displayed a tidally driven pattern with obvious characteristics at the multiday scale, with greater net CO2uptake during spring tides than neap tides. Based on the relative mutual information between NEE and biophysical variables...
Authors
Sara Knox, Lisamarie Windham-Myers, Frank Anderson, Cove Sturtevant, Brian A. Bergamaschi
Non-USGS Publications**
Bergamaschi, B.A. and Hedges, J.I. (1995) A Multichambered Apparatus for HF Solvolysis Experiments - Reaction of Cellulose HF Solvolysis Products with Acetic-Acid and Acetic-Anhydride. Carbohydrate Research 267, 115-126. https://doi.org/10.1016/0008-6215(94)00279-O
Hedges, J.I., Bergamaschi, B.A. and Benner, R. (1994) Comparative Analyses of DOC and DON in Natural Water - Erratum (Vol 41, Pg 121, 1989). Marine Chemistry 46, 407-408. https://doi.org/10.1016/0304-4203(94)90035-3
Hedges, J.I., Bergamaschi, B.A. and Benner, R. (1993) Comparative Analyses of DOC and DON in Natural Water. Marine Chemistry 41, 121-134. https://doi.org/10.1016/0304-4203(93)90110-A
Hopkinson, C., Cifuentes, L., Burdige, D., Fitzwater, S., Hansell, D., Henrichs, S., Kahler, P., Koike, I., Walsh, T. and Bergamaschi, B. (1993) Measurement of Dissolved Organic Carbon and Nitrogen in Natural Waters - DON Subgroup Report. Marine Chemistry 41, 23-36. https://doi.org/10.1016/0304-4203(93)90103-U
Hedges, J.I. and Bergamaschi, B.A. (1992) Seawater Carbon Measurement. Nature 359, 202-202. https://doi.org/DOI 10.1038/359202a0
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.