Daren M Carlisle, Ph.D.
Dr. Daren Carlisle manages the Ecological Flows Program for the Water Resources Mission Area.
Science and Products
Filter Total Items: 17
Monthly estimates of natural baseflow for 15,866 stream reaches, defined by the National Hydrography Dataset Plus Version 2.0 (NHDPlusV2), in the Delaware River Basin for the period 1950-2015 Monthly estimates of natural baseflow for 15,866 stream reaches, defined by the National Hydrography Dataset Plus Version 2.0 (NHDPlusV2), in the Delaware River Basin for the period 1950-2015
This metadata record describes monthly estimates of natural baseflow for 15,866 stream reaches, defined by the National Hydrography Dataset Plus Version 2.0 (NHDPlusV2), in the Delaware River Basin for the period 1950-2015. A statistical machine learning technique - random forest modeling (Liaw and Wiener, 2018; R Core Team, 2020) - was applied to estimate natural flows using about 150...
Modeled estimates of altered hydrologic metrics for all NHDPlus v21 reaches in the Chesapeake Bay watershed Modeled estimates of altered hydrologic metrics for all NHDPlus v21 reaches in the Chesapeake Bay watershed
Data are modeled estimates of flow status (inclined, diminished, or indeterminant) for 12 published hydrologic metrics (HMs) that characterize main components of flow regimes (duration, frequency, magnitude, timing, and rate of change). Model estimates came from random forest models independently built for each HM that predict flow status category using drainage area and previously...
Datasets for estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable Datasets for estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable
These data were used to describe a possible approach to estimate changes in invertebrate taxa richness at sites across the United States with known water-quality trends but no invertebrate data. This data release consists of invertebrate, water-quality, and covariate data from 1,322 sites and water-quality, covariate, and trend result data from an additional 259 sites with reported water...
Data set for an ecological risk assessment of Firpronil compounds in US streams Data set for an ecological risk assessment of Firpronil compounds in US streams
The phenylpyrazole insecticide fipronil and its degradates are a potential surface-water contaminant and toxicant to nontarget species such as aquatic macroinvertebrates. To better understand how fipronil, fipronil sulfide, fipronil sulfone, desulfinyl fipronil, and fipronil amide affect aquatic communities, a 30-day mesocosm experiment was run. Rock trays were colonized with natural...
Trends in selected streamflow metrics at reference streamgages in the conterminous United States, 1980-2014 Trends in selected streamflow metrics at reference streamgages in the conterminous United States, 1980-2014
This dataset includes four tables related to annual trends in streamflow metrics at 599 reference streamgages in the conterminous United States for the period 1955-2014. Reference streamgages are defined here as gages with drainage basins that are minimally impacted by anthropogenic effects such as reservoirs or urbanization. The four tables are: 1) computed annual values for 16...
Datasets used to asses the effects of antecedent streamflow and sample timing on trend assessments of fish, invertebrate and diatom communities (2002-12) Datasets used to asses the effects of antecedent streamflow and sample timing on trend assessments of fish, invertebrate and diatom communities (2002-12)
Detecting trends in biological attributes is central to many stream monitoring programs; however, understanding how natural variability in environmental factors affects trend results is not well understood. We evaluated the influence of antecedent streamflow and sample timing (covariates) on trend estimates for fish, invertebrate, and diatom taxa richness and biolgical condition from...
Filter Total Items: 58
Modeling functional flows in California rivers Modeling functional flows in California rivers
Environmental flows are critical to the recovery and conservation of freshwater ecosystems worldwide. However, estimating desired ranges of environmental flows across large, diverse landscapes is challenging. To advance protections of environmental flows for streams in California, USA, we developed a statewide modeling approach focused on functional components of the natural flow regime
Authors
Theodore E. Grantham, Daren M. Carlisle, Jeanette K. Howard, Belize Lane, Robert Lusardi, Alyssa Obester, Samuel Sandoval-Solis, Bronwen Stanford, Eric D. Stein, Kristine T. Taniguchi-Quan, Sarah M. Yarnell, Julie K. H Zimmerman
Natural and anthropogenic influences on benthic cyanobacteria in streams of the northeastern United States Natural and anthropogenic influences on benthic cyanobacteria in streams of the northeastern United States
Benthic cyanobacteria are widespread in streams and rivers and have the potential to release toxins. In large numbers, these microorganisms and their toxins present a risk to human health. Cyanobacterial abundance in stream biofilms is typically related to single or a limited set of environmental factors, mainly light availability, water temperature, and nutrient concentrations. However...
Authors
Nicholas O. Schulte, Daren M. Carlisle, Sarah Spaulding
Toward improved prediction of streamflow effects on freshwater fishes Toward improved prediction of streamflow effects on freshwater fishes
Understanding the effects of hydrology on fish populations is essential to managing for native fish conservation. However, despite decades of research illustrating streamflow influences on fish habitat, reproduction and survival, biologists remain challenged when tasked with predicting how fish populations will respond to changes in flow regimes. This uncertainty stems from insufficient
Authors
Mary Freeman, Kevin R. Bestgen, Daren M. Carlisle, Emmanuel A. Frimpong, Nathan R. Franssen, Ketih B. Gido, Elise R. Irwin, Yoichiro Kanno, Charles H. Luce, S. Kyle McKay, Meryl C. Mims, Julian D. Olden, N. LeRoy Poff, David L. Propst, Laura Rack, Allison H. Roy, Edward S. Stowe, Annika W. Walters, Seth J. Wenger
A web-based tool for assessing the condition of benthic diatom assemblages in streams and rivers of the conterminous United States A web-based tool for assessing the condition of benthic diatom assemblages in streams and rivers of the conterminous United States
Benthic diatom assemblages are known to be indicative of water quality but have yet to be widely adopted in biological assessments in the United States due to several limitations. Our goal was to address some of these limitations by developing regional multi-metric indices (MMIs) that are robust to inter-laboratory taxonomic inconsistency, adjusted for natural covariates, and sensitive...
Authors
Daren M. Carlisle, Sarah Spaulding, Meredith Tyree, Nicholas O. Schulte, Sylvia S Lee, Richard M. Mitchell, Amina A. Pollard
Estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable Estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable
The purpose of this report is to describe a possible approach to estimate changes in invertebrate taxa richness at sites with known water-quality trends but no invertebrate data. In this study, data from 1,322 sites were used to describe invertebrate response to changes in total nitrogen, total phosphorus, or specific conductance, and to estimate changes in invertebrate taxa richness at...
Authors
Robert E. Zuellig, Daren M. Carlisle
Multiple in-stream stressors degrade biological assemblages in five U.S. regions Multiple in-stream stressors degrade biological assemblages in five U.S. regions
Biological assemblages in streams are affected by a wide variety of physical and chemical stressors associated with land-use development, yet the importance of combinations of different types of stressors is not well known. From 2013 to 2017, the U.S. Geological Survey completed multi-stressor/multi-assemblage stream ecological assessments in five regions of the United States (434...
Authors
Ian R. Waite, Peter C. Van Metre, Patrick W. Moran, Christopher P. Konrad, Lisa H. Nowell, Michael R. Meador, Mark D. Munn, Travis S. Schmidt, Allen C. Gellis, Daren M. Carlisle, Paul M. Bradley, Barbara Mahler
By
Ecosystems Mission Area, Water Resources Mission Area, Contaminant Biology, Environmental Health Program, Toxic Substances Hydrology, Maryland-Delaware-D.C. Water Science Center, Central Plains Water Science Center, California Water Science Center, Oklahoma-Texas Water Science Center, Oregon Water Science Center, South Atlantic Water Science Center (SAWSC), Washington Water Science Center, Wyoming-Montana Water Science Center
Science and Products
Filter Total Items: 17
Monthly estimates of natural baseflow for 15,866 stream reaches, defined by the National Hydrography Dataset Plus Version 2.0 (NHDPlusV2), in the Delaware River Basin for the period 1950-2015 Monthly estimates of natural baseflow for 15,866 stream reaches, defined by the National Hydrography Dataset Plus Version 2.0 (NHDPlusV2), in the Delaware River Basin for the period 1950-2015
This metadata record describes monthly estimates of natural baseflow for 15,866 stream reaches, defined by the National Hydrography Dataset Plus Version 2.0 (NHDPlusV2), in the Delaware River Basin for the period 1950-2015. A statistical machine learning technique - random forest modeling (Liaw and Wiener, 2018; R Core Team, 2020) - was applied to estimate natural flows using about 150...
Modeled estimates of altered hydrologic metrics for all NHDPlus v21 reaches in the Chesapeake Bay watershed Modeled estimates of altered hydrologic metrics for all NHDPlus v21 reaches in the Chesapeake Bay watershed
Data are modeled estimates of flow status (inclined, diminished, or indeterminant) for 12 published hydrologic metrics (HMs) that characterize main components of flow regimes (duration, frequency, magnitude, timing, and rate of change). Model estimates came from random forest models independently built for each HM that predict flow status category using drainage area and previously...
Datasets for estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable Datasets for estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable
These data were used to describe a possible approach to estimate changes in invertebrate taxa richness at sites across the United States with known water-quality trends but no invertebrate data. This data release consists of invertebrate, water-quality, and covariate data from 1,322 sites and water-quality, covariate, and trend result data from an additional 259 sites with reported water...
Data set for an ecological risk assessment of Firpronil compounds in US streams Data set for an ecological risk assessment of Firpronil compounds in US streams
The phenylpyrazole insecticide fipronil and its degradates are a potential surface-water contaminant and toxicant to nontarget species such as aquatic macroinvertebrates. To better understand how fipronil, fipronil sulfide, fipronil sulfone, desulfinyl fipronil, and fipronil amide affect aquatic communities, a 30-day mesocosm experiment was run. Rock trays were colonized with natural...
Trends in selected streamflow metrics at reference streamgages in the conterminous United States, 1980-2014 Trends in selected streamflow metrics at reference streamgages in the conterminous United States, 1980-2014
This dataset includes four tables related to annual trends in streamflow metrics at 599 reference streamgages in the conterminous United States for the period 1955-2014. Reference streamgages are defined here as gages with drainage basins that are minimally impacted by anthropogenic effects such as reservoirs or urbanization. The four tables are: 1) computed annual values for 16...
Datasets used to asses the effects of antecedent streamflow and sample timing on trend assessments of fish, invertebrate and diatom communities (2002-12) Datasets used to asses the effects of antecedent streamflow and sample timing on trend assessments of fish, invertebrate and diatom communities (2002-12)
Detecting trends in biological attributes is central to many stream monitoring programs; however, understanding how natural variability in environmental factors affects trend results is not well understood. We evaluated the influence of antecedent streamflow and sample timing (covariates) on trend estimates for fish, invertebrate, and diatom taxa richness and biolgical condition from...
Filter Total Items: 58
Modeling functional flows in California rivers Modeling functional flows in California rivers
Environmental flows are critical to the recovery and conservation of freshwater ecosystems worldwide. However, estimating desired ranges of environmental flows across large, diverse landscapes is challenging. To advance protections of environmental flows for streams in California, USA, we developed a statewide modeling approach focused on functional components of the natural flow regime
Authors
Theodore E. Grantham, Daren M. Carlisle, Jeanette K. Howard, Belize Lane, Robert Lusardi, Alyssa Obester, Samuel Sandoval-Solis, Bronwen Stanford, Eric D. Stein, Kristine T. Taniguchi-Quan, Sarah M. Yarnell, Julie K. H Zimmerman
Natural and anthropogenic influences on benthic cyanobacteria in streams of the northeastern United States Natural and anthropogenic influences on benthic cyanobacteria in streams of the northeastern United States
Benthic cyanobacteria are widespread in streams and rivers and have the potential to release toxins. In large numbers, these microorganisms and their toxins present a risk to human health. Cyanobacterial abundance in stream biofilms is typically related to single or a limited set of environmental factors, mainly light availability, water temperature, and nutrient concentrations. However...
Authors
Nicholas O. Schulte, Daren M. Carlisle, Sarah Spaulding
Toward improved prediction of streamflow effects on freshwater fishes Toward improved prediction of streamflow effects on freshwater fishes
Understanding the effects of hydrology on fish populations is essential to managing for native fish conservation. However, despite decades of research illustrating streamflow influences on fish habitat, reproduction and survival, biologists remain challenged when tasked with predicting how fish populations will respond to changes in flow regimes. This uncertainty stems from insufficient
Authors
Mary Freeman, Kevin R. Bestgen, Daren M. Carlisle, Emmanuel A. Frimpong, Nathan R. Franssen, Ketih B. Gido, Elise R. Irwin, Yoichiro Kanno, Charles H. Luce, S. Kyle McKay, Meryl C. Mims, Julian D. Olden, N. LeRoy Poff, David L. Propst, Laura Rack, Allison H. Roy, Edward S. Stowe, Annika W. Walters, Seth J. Wenger
A web-based tool for assessing the condition of benthic diatom assemblages in streams and rivers of the conterminous United States A web-based tool for assessing the condition of benthic diatom assemblages in streams and rivers of the conterminous United States
Benthic diatom assemblages are known to be indicative of water quality but have yet to be widely adopted in biological assessments in the United States due to several limitations. Our goal was to address some of these limitations by developing regional multi-metric indices (MMIs) that are robust to inter-laboratory taxonomic inconsistency, adjusted for natural covariates, and sensitive...
Authors
Daren M. Carlisle, Sarah Spaulding, Meredith Tyree, Nicholas O. Schulte, Sylvia S Lee, Richard M. Mitchell, Amina A. Pollard
Estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable Estimating invertebrate response to changes in total nitrogen, total phosphorus, and specific conductance at sites where invertebrate data are unavailable
The purpose of this report is to describe a possible approach to estimate changes in invertebrate taxa richness at sites with known water-quality trends but no invertebrate data. In this study, data from 1,322 sites were used to describe invertebrate response to changes in total nitrogen, total phosphorus, or specific conductance, and to estimate changes in invertebrate taxa richness at...
Authors
Robert E. Zuellig, Daren M. Carlisle
Multiple in-stream stressors degrade biological assemblages in five U.S. regions Multiple in-stream stressors degrade biological assemblages in five U.S. regions
Biological assemblages in streams are affected by a wide variety of physical and chemical stressors associated with land-use development, yet the importance of combinations of different types of stressors is not well known. From 2013 to 2017, the U.S. Geological Survey completed multi-stressor/multi-assemblage stream ecological assessments in five regions of the United States (434...
Authors
Ian R. Waite, Peter C. Van Metre, Patrick W. Moran, Christopher P. Konrad, Lisa H. Nowell, Michael R. Meador, Mark D. Munn, Travis S. Schmidt, Allen C. Gellis, Daren M. Carlisle, Paul M. Bradley, Barbara Mahler
By
Ecosystems Mission Area, Water Resources Mission Area, Contaminant Biology, Environmental Health Program, Toxic Substances Hydrology, Maryland-Delaware-D.C. Water Science Center, Central Plains Water Science Center, California Water Science Center, Oklahoma-Texas Water Science Center, Oregon Water Science Center, South Atlantic Water Science Center (SAWSC), Washington Water Science Center, Wyoming-Montana Water Science Center