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Theresa Fregoso

Geographer at the USGS Pacific Coastal and Marine Science Center

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San Francisco Bay, California, consists of several subembayments. North Bay consists of Honker, Suisun, and Grizzly Bays.

San Francisco Bay Bathymetry

Bathymetry of a dynamic tidal estuary, such as San Francisco Bay, provides the observable linkage between anthropogenic modifications of the landscape—such as evolving land use practices, flood control, and water diversions—and natural forces of climate-driven river flow, sea level change, tides, and wind. By examining our record of hydrographic surveys, spanning over 150 years, we can gain...
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center, San Francisco Bay and Sacramento-San Joaquin Delta Estuary
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San Francisco Bay Bathymetry

Bathymetry of a dynamic tidal estuary, such as San Francisco Bay, provides the observable linkage between anthropogenic modifications of the landscape—such as evolving land use practices, flood control, and water diversions—and natural forces of climate-driven river flow, sea level change, tides, and wind. By examining our record of hydrographic surveys, spanning over 150 years, we can gain...
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Illustration showing the contours of the bay floor underwater and the relief of surrounding hills, and dots.

San Francisco Bay geomorphology

The primary objective of this task is to develop tools for predicting the long-term geomorphic evolution of estuaries. Sediment core and historical change analysis will be used in combination with interpretation of high-resolution seismic profiles to develop tools for predicting geomorphic evolution of estuaries. Historical change analysis will use hydrographic and lidar data. Longer-term data...
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center, Core Preparation and Analysis Laboratory and Sample Repositories, Multi-Sensor Core Logger Laboratory
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San Francisco Bay geomorphology

The primary objective of this task is to develop tools for predicting the long-term geomorphic evolution of estuaries. Sediment core and historical change analysis will be used in combination with interpretation of high-resolution seismic profiles to develop tools for predicting geomorphic evolution of estuaries. Historical change analysis will use hydrographic and lidar data. Longer-term data...
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Bathymetric change analysis in San Francisco Bay, California, from 1971 to 2020

This data release provides bathymetric change grids of four geographic areas of San Francisco Bay, California, comparing digital elevation models (DEMs) created from bathymetric data collected in the 1970s and 1980s with DEMs created from bathymetric data collected in the 2010s and 2020. These types of change analyses can provide information on the quantities and patterns of erosion and deposition
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Pacific Coastal and Marine Science Center

Bathymetric surveys collected near Dumbarton Bridge in south San Francisco Bay, California, 2008 to 2019

In 2008, the U.S. Geological Survey began mapping the main channel and shallow intertidal mudflats between the Dumbarton Bridge and a railroad bridge located 1 km to the south in south San Francisco Bay. This information was collected to document bathymetric change before and after restoration to inform the South Bay Salt Pond Restoration Project (https://www.southbayrestoration.org), which initia
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center

High-resolution (1 m) digital elevation model (DEM) of San Francisco Bay, California, created using bathymetry data collected between 1999 and 2020 (ver. 2.0, July 2021)

A 1-m resolution bathymetric digital elevation model (DEM) of all off San Francisco Bay was constructed from bathymetric surveys collected from 1999 to 2016. The DEM has been divided into northern and southern sections due to file size, and is available in both MLLW and NAVD88 versions. Background: In 2014 and 2015 the California Ocean Protection Council (OPC) contracted the collection of bathy
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center

Pilot study on bathymetric change analyses in the Sacramento-San Joaquin Delta, California

The bathymetry of the Sacramento-San Joaquin Delta affects the flow of water and sediment throughout the system and is a basic control on levee stability, habitat distribution, and water quality. Delta bathymetry is dynamic, responding to both natural forces and human activities. Assessment of future Delta conditions is aided by understanding how its bathymetry has changed in the past. This pilot
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center

Bathymetry, topography, and acoustic backscatter data, and a digital elevation model (DEM) of the Cache Slough Complex and Sacramento River Deep Water Ship Channel, Sacramento-San Joaquin Delta, California

This data release presents bathymetric and topographic data from surveys performed between 2017 and 2018 in the Cache Slough Complex and the Sacramento River Deep Water Ship Channel (DWSC), northern Sacramento-San Joaquin Delta, California. The shallow, highly vegetated aquatic habitats of this region necessitated a variety of survey platforms and techniques. In the deeper channels, swath bathymet
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center, San Francisco Bay and Sacramento-San Joaquin Delta Estuary

Projected flood water depths on Roi-Namur, Kwajalein Atoll, Republic of the Marshall Islands

Projected future wave-driven flooding depths on Roi-Namur Island on Kwajalein Atoll in the Republic of the Marshall Islands for a range of climate-change scenarios. This study utilized field data to calibrate oceanographic and hydrogeologic models, which were then used with climate-change and sea-level rise projections to explore the effects of sea-level rise and wave-driven flooding on atoll isl
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Pacific Coastal and Marine Science Center

Bathymetry and acoustic backscatter data of the Sacramento River, from the Feather River to Knights Landing, California in February, 2011

On February 1, 2011, the USGS Pacific Coastal and Marine Science Center (PCMSC) team carried out a project using interferometric sidescan sonar to characterize the riverbed and channel banks of a 12 mile reach of the Sacramento River near the town of Knights Landing, California (River Mile 79 through River Mile 91). The project was developed in coordination with David Smith, Engineering Research a
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Pacific Coastal and Marine Science Center

Gravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California

This data release contains information on gravity cores that were collected by the U.S. Geological Survey in the area of San Pablo Bay and Carquinez Strait, California in 1990, 1991, and 2000. Ten (10) pdf files describe gravity cores that were split, photographed, and imaged by X-rays, and another pdf file contains a core-log legend. In addition, a shapefile (sanpablo_spls.shp) provides sample co
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center, Core Preparation and Analysis Laboratory and Sample Repositories, Multi-Sensor Core Logger Laboratory

San Francisco Bay Delta Bathymetric/Topographic digital elevation model (DEM) - 2016 SF Bay Delta DEM 10-m

A high-resolution (10-meter per pixel) digital elevation model (DEM) was created for the Sacramento-San Joaquin Delta using both bathymetry and topography data. This DEM is the result of collaborative efforts of the U.S. Geological Survey (USGS) and the California Department of Water Resources (DWR). The base of the DEM is from a 10-m DEM released in 2004 and updated in 2005 (Foxgrover and others,
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Natural Hazards Mission Area, Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center
Filter Total Items: 13

Successful hindcast of 7 years of mud morphodynamics influenced by salt pond restoration in south San Francisco Bay

Alviso Slough in South San Francisco Bay has been experiencing restoration of adjacent former salt-production ponds into muted tidal ponds, tidal ponds, and salt marsh. As a result, tidal prism through Alviso Slough has increased and mercury-contaminated sediment has been remobilized. We developed a 2D, high-resolution, process-based model (Delft3D FM-wave) to hindcast observed morpho-dynamic deve
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Mick Van der Wegen, Johan Reyns, Bruce E. Jaffe, Amy C. Foxgrover, Fernanda Achete, Mark C. Marvin-DiPasquale, Theresa A. Fregoso, Judy Nam, Jessica Lovering
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Pacific Coastal and Marine Science Center

Observations and morphodynamic modeling of decadal-scale morphologic change in estuaries under sea level rise

Sea level rise is expected to affect coastal areas all around the world, including the estuarine environment. New bathymetry collected in 2014 provided a unique opportunity to test the modeling of Elmilady et al. (2019), who presented a morphodynamic DELFT3D model of San Pablo Bay, California, that included detailed tidal water movement, wind-wave action, sediment transport, and resulting bed leve
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Bruce E. Jaffe, Hesham Elmilady, Mick Van der Wegen, Theresa A. Fregoso
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Natural Hazards Mission Area, Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center

Sediment deposition, erosion, and bathymetric change in San Francisco Bay, California, 1971–1990 and 1999–2020

Bathymetric change analyses document historical patterns of sediment deposition and erosion, providing valuable insight into the sediment dynamics of coastal systems, including pathways of sediment and sediment-bound contaminants. In 2014 and 2015, the Office for Coastal Management, in partnership with the National Oceanic and Atmospheric Administration (NOAA) Office of Coastal Management, provide
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Theresa A. Fregoso, Amy C. Foxgrover, Bruce E. Jaffe
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Pacific Coastal and Marine Science Center

A revised continuous surface elevation model for modeling

A digital elevation model (DEM) is an essential component of any hydrodynamic model. The Delta Modeling Section (Section) has maintained a database of bathymetry soundings and levee surveys for decades and published a 10-meter (10m) DEM for the San Francisco Bay and Sacramento-San Joaquin Delta (Delta) (California Department of Water Resources 2012). In collaboration with the U.S. Geological Surve
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Rueen-Fang Wang, Eli Ateljevich, Theresa A. Fregoso, Bruce E. Jaffe
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Natural Hazards Mission Area, Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center

Slough evolution and legacy mercury remobilization induced by wetland restoration in South San Francisco Bay

Coastal wetlands have a long history of degradation and destruction due to human development. Now recognized as one of the most productive ecosystems in the world, substantial efforts are being made to restore this critical habitat. While wetland restoration efforts are generally viewed as beneficial in terms of providing wildlife habitat and flood control, they are often accompanied by dramatic p
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Amy C. Foxgrover, Mark C. Marvin-DiPasquale, Bruce E. Jaffe, Theresa A. Fregoso
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Natural Hazards Mission Area, Coastal and Marine Hazards and Resources Program, Toxic Substances Hydrology, Pacific Coastal and Marine Science Center

Description of gravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California

Seventy-two gravity cores were collected by the U.S. Geological Survey in 1990, 1991, and 2000 from San Pablo Bay and Carquinez Strait, California. The gravity cores collected within San Pablo Bay contain bioturbated laminated silts and sandy clays, whole and broken bivalve shells (mostly mussels), fossil tube structures, and fine-grained plant or wood fragments. Gravity cores from the channel wal
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Donald L. Woodrow, John L. Chin, Florence L. Wong, Theresa A. Fregoso, Bruce E. Jaffe
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Pacific Coastal and Marine Science Center

A new seamless, high-resolution digital elevation model of the San Francisco Bay-Delta Estuary, California

Climate change, sea-level rise, and human development have contributed to the changing geomorphology of the San Francisco Bay - Delta (Bay-Delta) Estuary system. The need to predict scenarios of change led to the development of a new seamless, high-resolution digital elevation model (DEM) of the Bay – Delta that can be used by modelers attempting to understand potential future changes to the estua
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Theresa A. Fregoso, Rueen-Fang Wang, Eli Ateljevich, Bruce E. Jaffe
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Pacific Coastal and Marine Science Center, San Francisco Bay and Sacramento-San Joaquin Delta Estuary

Late Holocene sedimentary environments of south San Francisco Bay, California, illustrated in gravity cores

Data are reported here from 51 gravity cores collected from the southern part of San Francisco Bay by the U.S. Geological Survey in 1990. The sedimentary record in the cores demonstrates a stable geographic distribution of facies and spans a few thousand years. Carbon-14 dating of the sediments suggests that sedimentation rates average about 1 mm/yr. The geometry of the bay floor and the character
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Donald L. Woodrow, Theresa A. Fregoso, Florence L. Wong, Bruce E. Jaffe
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Pacific Coastal and Marine Science Center

Burial and exhumation of temperate bedrock reefs as elucidated by repetitive high-resolution sea floor sonar surveys: Spatial patterns and impacts to species' richness and diversity

To understand how chronic sediment burial and scour contribute to variation in the structure of algal and invertebrate communities on temperate bedrock reefs, the dynamics of the substrate and communities were monitored at locations that experience sand inundation and adjacent areas that do not. Co-located benthic scuba-transect surveys and high-resolution swath-sonar surveys were completed on bed
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Curt D. Storlazzi, Theresa A. Fregoso, Jared D. Figurski, Jan Freiwald, Steve I. Lonhart, David P. Finlayson
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Pacific Coastal and Marine Science Center

Bathymetry and digital elevation models of Coyote Creek and Alviso Slough, South San Francisco Bay, California

In 2010, the U.S. Geological Survey (USGS), Pacific Coastal and Marine Science Center completed three cruises to map the bathymetry of the main channel and shallow intertidal mudflats in the southernmost part of south San Francisco Bay. The three surveys were merged to generate comprehensive maps of Coyote Creek (from Calaveras Point east to the railroad bridge) and Alviso Slough (from the bay to
Authors
Amy C. Foxgrover, David P. Finlayson, Bruce E. Jaffe, Theresa A. Fregoso
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center, San Francisco Bay and Sacramento-San Joaquin Delta Estuary

Estuarine sedimentation, sediment character, and foraminiferal distribution in central San Francisco Bay, California

Central San Francisco Bay is the deepest subembayment in the San Francisco Bay estuary and hence has the largest water volume of any of the subembayments. It also has the strongest tidal currents and the coarsest sediment within the estuary. Tidal currents are strongest over the west-central part of central bay and, correspondingly, this area is dominated by sand-size sediment. Much of the area ea
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John L. Chin, Donald L. Woodrow, Mary McGann, Florence L. Wong, Theresa A. Fregoso, Bruce E. Jaffe
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center, San Francisco Bay and Sacramento-San Joaquin Delta Estuary

Sediment deposition, erosion, and bathymetric change in central San Francisco Bay: 1855-1979

Central San Francisco Bay is the hub of a dynamic estuarine system connecting the San Joaquin and Sacramento River Deltas, Suisun Bay, and San Pablo Bay to the Pacific Ocean and South San Francisco Bay. To understand the role that Central San Francisco Bay plays in sediment transport throughout the system, it is necessary to first determine historical changes in patterns of sediment deposition and
Authors
Theresa A. Fregoso, Amy C. Foxgrover, Bruce E. Jaffe
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Coastal and Marine Hazards and Resources Program, Pacific Coastal and Marine Science Center, San Francisco Bay and Sacramento-San Joaquin Delta Estuary
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Bathymetric Data Tracks Sediment Flux in San Francisco Bay

New detailed analysis of bathymetric digital elevation models (DEMs) spanning much of San Francisco Bay reveals a net loss of sediment since the 1980s...

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