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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42871

Determining the distribution, status, and linkages of Agassiz's desert tortoise populations in the uplands surrounding the Coachella Valley Determining the distribution, status, and linkages of Agassiz's desert tortoise populations in the uplands surrounding the Coachella Valley

In support of the goals of the Coachella Valley Conservation Commission and the Bureau of Land Management, we performed surveys to determine the status, distribution, demographics, and possible genetic linkages of Agassiz’s desert tortoise (Gopherus agassizii) populations within the Coachella Valley Multiple Species Habitat Conservation Plan (CVMSHCP) area during a multi-decadal...
Authors
Michele R. Puffer, Jeffrey E. Lovich, Kristy L. Cummings

Analysis adapted from text mining quantitively reveals abrupt and gradual plant-community transitions after fire in sagebrush steppe Analysis adapted from text mining quantitively reveals abrupt and gradual plant-community transitions after fire in sagebrush steppe

Context Plant communities vary both abruptly and gradually over time but differentiating between types of change can be difficult with existing classification and ordination methods. Structural topic modeling (STRUTMO), a text mining analysis, offers a flexible methodology for analyzing both types of temporal trends.Objectives Our objectives were to (1) identify post-fire dominant...
Authors
Cara Applestein, Christopher R. Anthony, Matthew J. Germino

Accurately characterizing climate change scenario planning in the U.S. National Park Service: Comment on Murphy et al. 2023 Accurately characterizing climate change scenario planning in the U.S. National Park Service: Comment on Murphy et al. 2023

We more accurately locate the boundary between current practice and research priorities regarding climate change scenario planning in U.S. federal land management agencies by supplementing the characterization in a recent article (“Understanding perceptions of climate change scenario planning in United States public land management agencies”) of its use in the U.S. National Park Service
Authors
Joel H. Reynolds, Brian W. Miller, Gregor W. Schuurman, Wylie A. Carr, Amy Symstad, John E. Gross, Amber N. Runyon

Nerodia clarkii (Saltmarsh Watersnake). Predation Nerodia clarkii (Saltmarsh Watersnake). Predation

Predators of Nerodia clarkii are suspected to include larger species of crabs, fish, wading birds, snakes, alligators, and crocodiles. To our knowledge, there have only been two published observations of predation on N. clarkii, including a predation attempt from a Callinectes sapidus (Blue Crab) in Mississippi, USA and a successful predation by a Grus americana (Whooping Crane) in Texas...
Authors
Bryna L. Daykin, Sidney T. Godfrey, Michael Cherkiss, Gareth Blakemore, Frank J. Mazzotti

Characterizing vegetation and return periods in avalanche paths using lidar and aerial imagery Characterizing vegetation and return periods in avalanche paths using lidar and aerial imagery

Snow avalanches are a hazard and ecological disturbance across mountain landscapes worldwide. Understanding how avalanche frequency affects forests and vegetation improves infrastructure planning, risk management, and avalanche forecasting. We implemented a novel approach using lidar, aerial imagery, and a random forest model to classify imagery-observed vegetation within avalanche paths...
Authors
Erich H. Peitzsch, Chelsea Martin-Mikle, Jordy Hendrikx, Karl W. Birkeland, Daniel B. Fagre

Sea turtle density surface models along the United States Atlantic coast Sea turtle density surface models along the United States Atlantic coast

Spatially explicit estimates of marine species distribution and abundance are required to quantify potential impacts from human activities such as military training and testing, fisheries interactions, and offshore energy development. There are 4 protected species of sea turtle (loggerhead, green, Kemp’s ridley, and leatherback) commonly found along the east coast of the USA, our study...
Authors
Andrew DiMatteo, Jason J. Roberts, D. Todd Jones-Farrand, Lance Garrison, Kristen Hart, Robert D. Kenney, William A. McLellan, Kate Lomac-MacNair, Debra Palka, Meghan E. Rickard, Kelsey E. Roberts, Ann M. Zoidis, L. Sparks

Allochthonous marsh subsidies enhances food web productivity in an estuary and its surrounding ecosystem mosaic Allochthonous marsh subsidies enhances food web productivity in an estuary and its surrounding ecosystem mosaic

Terrestrial organic matter is believed to play an important role in promoting resilient estuarine food webs, but the inherent interconnectivity of estuarine systems often obscures the origins and importance of these terrestrial inputs. To determine the relative contributions of terrestrial (allochthonous) and aquatic (autochthonous) organic matter to the estuarine food web, we analyzed...
Authors
Melanie J. Davis, Isa Woo, Susan E.W. De La Cruz, Christopher S. Ellings, Sayre Hodgson, Glynnis Nakai

Wildfire probability estimated from recent climate and fine fuels across the big sagebrush region Wildfire probability estimated from recent climate and fine fuels across the big sagebrush region

Background Wildfire is a major proximate cause of historical and ongoing losses of intact big sagebrush (Artemisia tridentata Nutt.) plant communities and declines in sagebrush obligate wildlife species. In recent decades, fire return intervals have shortened and area burned has increased in some areas, and habitat degradation is occurring where post-fire re-establishment of sagebrush is...
Authors
Martin C. Holdrege, Daniel Rodolphe Schlaepfer, Kyle A. Palmquist, Michele R. Crist, Kevin E. Doherty, William K. Lauenroth, Thomas E. Remington, Karin L. Riley, Karen C. Short, John C. Tull, Lief A. Wiechman, John B. Bradford

The past, present, and a future for native charr in Japan The past, present, and a future for native charr in Japan

Charrs (Salvelinus) reach their southernmost distribution in Japan, and are uniquely adapted to the short, steep streams of this island archipelago. Southern Asian Dolly Varden (Salvelinus curilus) occur only in Hokkaido Island, whereas white-spotted charr (Salvelinus leucomaenis) range to southern Honshu. Both species diverged from an ancestral lineage during the late Pliocene/early...
Authors
K.D. Fausch, Kentaro Morita, Jun-ichi Tsuboi, Yoichiro Kanno, Shoichiro Yamamoto, Daisuke Kishi, Jason Dunham, Itsuro Koizumi, Koh Hasegawa, Mikio Inoue, Takuya Sato, Satoshi Kitano

Brief communication: Recent estimates of glacier mass loss for western North America from laser altimetry Brief communication: Recent estimates of glacier mass loss for western North America from laser altimetry

Glaciers in western North American outside of Alaska are often overlooked in global studies because their potential to contribute to changes in sea level is small. Nonetheless, these glaciers represent important sources of freshwater, especially during times of drought. Differencing recent ICESat-2 data from a digital elevation model derived from a combination of synthetic aperture radar...
Authors
Brian Menounos, Alex Gardner, Caitlyn Florentine, Andrew Fountain

Geese migrating over the Pacific Ocean select altitudes coinciding with offshore wind turbine blades Geese migrating over the Pacific Ocean select altitudes coinciding with offshore wind turbine blades

Renewable energy facilities are a key part of mitigating climate change, but can pose threats to wild birds and bats, most often through collisions with infrastructure. Understanding collision risk and the factors affecting it can help minimize impacts on wild populations. For wind turbines, flight altitude is a major factor influencing collision risk, and altitude-selection analyses can...
Authors
Emily L. Weiser, Cory T. Overton, David C. Douglas, Michael L. Casazza, Paul L. Flint

Long-term occupancy monitoring reveals value of moderate disturbance for an open-habitat specialist, the Stephens' kangaroo rat (Dipodomys stephensi) Long-term occupancy monitoring reveals value of moderate disturbance for an open-habitat specialist, the Stephens' kangaroo rat (Dipodomys stephensi)

For species of conservation concern, long-term monitoring is vital to properly characterize changes in population distribution and abundance over time. In addition, long-term monitoring guides management decisions by informing and evaluating the efficacy of management actions. A long-term monitoring initiative for the federally threatened Stephens' Kangaroo rat (Dipodomys stephensi, SKR)...
Authors
Cheryl S. Brehme, Philip Robert Gould, Denise Clark, Robert N. Fisher
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