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Publications

Explore scientific publications from the USGS St. Petersburg Coastal and Marine Science Center.

Filter Total Items: 912

Spatial and temporal variability of pCO2, carbon fluxes and saturation state on the West Florida Shelf

The West Florida Shelf (WFS) is a source of uncertainty for the Gulf of Mexico carbon budget. Data from the synthesis of approximately 135,000 pCO2 values from over 96 cruises from the WFS show that the shelf waters fluctuate between being a weak source to a weak sink of carbon with the atmosphere. Overall, the shelf acts as a weak source of CO2 at 0.32 ± 1.5 mol m-2 yr-1. Subregions, however, r
Authors
L. Robbins, K. Daley, L. Barbero, R. Wanninkhof, R.L. Heathcote, H. Zong, John T. Lisle, W.-J. Cai, C. Smith

Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype

Cold-water corals provide critical habitats for a multitude of marine species, but are understudied relative to tropical corals. Primnoa pacifica is a cold-water coral prevalent throughout Alaskan waters, while another species in the genus, Primnoa resedaeformis, is widely distributed in the Atlantic Ocean. This study examined the V4-V5 region of the 16S rRNA gene after amplifying and pyrosequenci
Authors
Dawn B. Goldsmith, Christina A. Kellogg, Cheryl L. Morrison, Michael A. Gray, Robert P. Stone, Rhian G. Waller, Sandra D. Brooke, Steve W. Ross

Airborne bacteria in Earth’s lower stratosphere resemble taxa detected in the troposphere: results from a new NASA aircraft bioaerosol collector (ABC)

Airborne microorganisms in the upper troposphere and lower stratosphere remain elusive due to a lack of reliable sample collection systems. To address this problem, we designed, installed, and flight-validated a novel Aircraft Bioaerosol Collector (ABC) for NASA's C-20A that can make collections for microbiological research investigations up to altitudes of 13.7 km. Herein we report results from t
Authors
David J. Smith, Jayamary D. Ravichandar, Sunit Jain, Dale W. Griffin, Hongbin Yu, Qian Tan, James Thissen, Terry Lusby, Patrick Nicoll, Sarah Shedler, P. Martinez, Alejandro Osorio, Jason Lechniak, Samuel Choi, Kayleen Sabino, Kathryn Iverson, Luisa Chan, Crystal Jaing, John McGrath

Dynamic modeling of barrier island response to hurricane storm surge under future sea level rise

Sea level rise (SLR) has the potential to exacerbate the impacts of extreme storm events on the coastal landscape. This study examines the coupled interactions of SLR on storm-driven hydrodynamics and barrier island morphology. A numerical model is used to simulate the hydrodynamic and morphodynamic impacts of two Gulf of Mexico hurricanes under present-day and future sea levels. SLR increased sur
Authors
Davina Passeri, Matthew V. Bilskie, Nathaniel G. Plant, Joseph W. Long, Scott C. Hagen

Rapid, remote assessment of Hurricane Matthew impacts using four-dimensional structure-from-motion photogrammetry

Timely assessment of coastal landforms and structures after storms is important for evaluating storm impacts, aiding emergency response and restoration, and initializing and assessing morphological models. Four-dimensional multiview photogrammetry, also known as structure from motion (4D SfM), provides a method for generating three-dimensional reconstructions of landscapes at two times (before and
Authors
Christopher R. Sherwood, Jonathan Warrick, Andrew D. Hill, Andrew C. Ritchie, Brian D. Andrews, Nathaniel G. Plant

The foraminifera of Chincoteague Bay, Assateague Island, and the surrounding areas: A regional distribution study

Foraminiferal census data from Chincoteague Bay, Newport Bay, the salt marshes of Assateague Island, adjacent mainland salt marshes, and the inner-shelf, were assessed to determine the current assemblages in Chincoteague Bay, and how the different environments surrounding the bay, and the gradients within the bay, influence the microfossil distribution. Determining the current background distribut
Authors
Alisha M. Ellis, Jaimie E. Shaw, Lisa E. Osterman, Christopher G. Smith

Analysis of the impact of African dust storms on the presence of enteric viruses in the atmosphere in Tenerife, Spain

Airborne viruses and their relation to dust storms, as a possible route for dispersion, have not been widely investigated. There are, however, studies that have described the airborne dispersal of pathogenic viruses and their potential impact on public and agronomical health. Atmospheric samples were collected in an urban area of Tenerife during 2009, 2010, 2012 and 2013 and screened for the prese
Authors
Cristina Gonzalez-Martin, Nieves Coronado-Alvarez, Nuria Teigell-Perez, Raquel Diaz-Solano, Francisco Exposito, Juan Diaz, Dale W. Griffin, Basilio Valladares

A framework for identifying and characterising coral reef “oases” against a backdrop of degradation

Human activities have led to widespread ecological decline; however, the severity of degradation is spatially heterogeneous due to some locations resisting, escaping, or rebounding from disturbances.We developed a framework for identifying oases within coral reef regions using long‐term monitoring data. We calculated standardised estimates of coral cover (z‐scores) to distinguish sites that deviat
Authors
James R. Guest, Peter J. Edmunds, Ruth D. Gates, Ilsa B. Kuffner, Andreas J Andersson, Brian B. Barnes, Iliana Chollett, Travis A. Courtney, Robin Elahi, Kevin Gross, Elizabeth A. Lenz, Satoshi Mitarai, Peter J. Mumby, Hannah R. Nelson, Britt A. Parker, Hollie M. Putnam, Caroline S. Rogers, Lauren Toth

Sea-level rise could overwhelm coral reefs

An assessment of the capacity of coral reefs to grow fast enough to keep up with projected rises in sea level finds that most reefs will fall behind if nothing is done to restore them.
Authors
Ilsa B. Kuffner

Benthic foraminifera from the Carnarvon Ramp reveal variability in Leeuwin Current activity (Western Australia) since the Pliocene

Benthic foraminiferal assemblages from a ~300 m deep core from an outer carbonate-ramp site off Western Australia (International Ocean Discovery Program Core U1460A) were examined to reconstruct the paleoceanographic evolution of the Carnarvon Ramp and the warm surficial Leeuwin Current (LC) for the last 3.54 Ma. Of the identified 179 benthic foraminiferal species, occurrences of the 15 most abund
Authors
Christian Haller, Pamela Hallock, Albert C. Hine, Christopher G. Smith

Environmental controls on the geochemistry of Globorotalia truncatulinoides in the Gulf of Mexico: Implications for paleoceanographic reconstructions

Modern observations of planktic foraminifera from sediment trap studies help to constrain the regional ecology of paleoceanographically valuable species. Results from a weekly-resolved sediment trap time series (2008–2014) in the northern Gulf of Mexico demonstrate that 92% of Globorotalia truncatulinoides flux occurs in winter (January, February, and March), and that encrusted and non-encrusted i
Authors
Caitlin E. Reynolds, Julie N. Richey, Jennifer S. Fehrenbacher, Brad E. Rosenheim, Howard J. Spero

A framework for modeling scenario-based barrier island storm impacts

Methods for investigating the vulnerability of existing or proposed coastal features to storm impacts often rely on simplified parametric models or one-dimensional process-based modeling studies that focus on changes to a profile across a dune or barrier island. These simple studies tend to neglect the impacts to curvilinear or alongshore varying island planforms, influence of non-uniform nearshor
Authors
Rangley C. Mickey, Joseph W. Long, P. Soupy Dalyander, Nathaniel G. Plant, David M. Thompson