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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42994

Building resilience in dryland ecosystems: A climate adaptation strategy menu for pinyon–juniper woodlands Building resilience in dryland ecosystems: A climate adaptation strategy menu for pinyon–juniper woodlands

Pinyon–juniper (PJ) woodlands, one of the most extensive mature and old-growth woodland types in the Western United States, provide critical ecological, cultural, and economic benefits but face increasing threats from climate change, altered disturbance regimes, invasive species, and pests. We developed the PJ Woodland Climate Adaptation Management Menu, a decision support tool designed...
Authors
Jesse Gray, Mandy L. Slate, Alyson Ennis, Courtney Peterson, John B. Bradford, Adam Roy Noel, Michael C. Duniway, Tara B. Bishop, Ian P. Barrett, Chris Domschke, Joel T. Humphries, Nicole N. Barger

Nest site and habitat changes over 15 years in a predicted climate refugium in Beluga, AK, USA, have a positive impact on Hudsonian godwit (Limosa haemastica) nest survival Nest site and habitat changes over 15 years in a predicted climate refugium in Beluga, AK, USA, have a positive impact on Hudsonian godwit (Limosa haemastica) nest survival

Climate change is transforming the Arctic and sub-Arctic at a pace that threatens many taxa with population declines and extinction. However, some habitats–such as muskeg bogs–can serve as climatic refugia and lessen the effects of a changing climate on the species that rely on them. Hudsonian Godwits (Limosa haemastica) are a species of migratory shorebird that utilizes the muskeg bogs...
Authors
Eden Smith, Rose J. Swift, Anna Courtemanche, Feipeng Huang, Mary Margaret Pelton, Lauren Puleo, Josiah Simmonds, Matthew Waller, Hannah Walton, Casey Weissburg, Luke R. Wilde, Nathan R. Senner

A hierarchical approach for finding undiscovered populations of an endangered bumble bee A hierarchical approach for finding undiscovered populations of an endangered bumble bee

Understanding the distributions of rare species is necessary to guide monitoring and inform species recovery efforts. The rusty patched bumble bee (RPBB; Bombus affinis, Cresson) is an endangered species with an extant, known distribution centered around urban areas of the Midwestern United States. We tested a novel approach for finding undocumented RPBBs outside of urban centers and...
Authors
Clint Otto, Alma Christa Schrage, Audrey Claire Lothspeich, Larissa L. Bailey, Tamara Smith, Robert Planman, Judy Cardin, Kristen S. Ellis, Bethany Dennis, Ralph Grundel

Modeling chronic wasting disease transmission risk in mule deer related to habitat characteristics Modeling chronic wasting disease transmission risk in mule deer related to habitat characteristics

Chronic wasting disease (CWD) is a prion disease of cervids that spreads to uninfected individuals through direct transmission (contact with infected individuals), vertical transmission (from mother to offspring), or indirect transmission (exposure to contaminated environments). The risk of indirect transmission is unevenly distributed on the landscape, and risk levels are expected to be
Authors
Erica Meta Christensen, Nathan J. Kleist, David R. Edmunds, Julie A. Heinrichs, D. Joanne Saher, Ashley L. Whipple, Melia DeVivo, Cameron L. Aldridge

Efficiency of down-looking cameras for detecting round goby (Neogobius melanostomus) over varying substrates in laboratory microcosms Efficiency of down-looking cameras for detecting round goby (Neogobius melanostomus) over varying substrates in laboratory microcosms

Since invading the Laurentian Great Lakes in the late 1980s, round goby Neogobius melanostomus have become a dominant benthic prey species, resulting in a need to accurately monitor their population abundance to inform fisheries management. Camera-based methods for assessing round goby abundances have gained popularity, but their efficiencies for detecting round goby are poorly...
Authors
Nicholas Yeager, Travis O. Brenden, Peter C. Esselman, Kailee A. Schulz, Alden T. Tilley

Using structured decision-making to develop a communications strategy for the U.S. Geological Survey Cooperative Research Units Program Using structured decision-making to develop a communications strategy for the U.S. Geological Survey Cooperative Research Units Program

Communication regarding the mission of the U.S. Geological Survey (USGS) Cooperative Research Units Program (CRU) can take many forms, yet clear and concise messaging for various audiences is critical to highlight program accomplishments and increase visibility. Before the work described in this report, CRU did not have a communication strategy; therefore, CRU leadership supported a...
Authors
Kelly Filer Robinson, Sarah Nelson Sells, Conor P. McGowan, Elise R. Irwin

Rethinking seed selection based on climate matching during restoration: Geography, soils and climate explain species-specific mortality Rethinking seed selection based on climate matching during restoration: Geography, soils and climate explain species-specific mortality

Implicit in the construction of seed transfer zones (STZs) are the assumptions that plant populations are adapted to their home climates and that transferring native seed across climate gradients risks maladaptation and poor performance. However, plants are adapted to multiple aspects of their environments that are often excluded from STZ development. Here, we used models integrating...
Authors
Carla Maria Roybal, Ella M. Samuel, Rachel M. Mitchell, Daniel E. Winkler, Robert Massatti

GT-Seq panel development for species identification and parentage analysis of closely related hybridising Scaphirhynchus sturgeons GT-Seq panel development for species identification and parentage analysis of closely related hybridising Scaphirhynchus sturgeons

Hatchery supplementation is vital for conserving dwindling fish populations. Effective augmentation requires distinguishing hatchery-origin from wild individuals and accurately identifying species, particularly in systems where closely related species coexist. Genetic monitoring is key to quantifying genetic differences, but conventional markers do not distinguish hybrids, especially...
Authors
Junman Huang, Richard Flamio Jr., Nathan R. Campbell, Aaron J. DeLonay, Amy C. Buhman, Edward J. Heist

Cumulative effects of multiple stressors on marine mammals: Elephant seals as a model system Cumulative effects of multiple stressors on marine mammals: Elephant seals as a model system

Noise exposure is a potential stressor for free-ranging marine mammals and is often studied in the absence of other environmental factors. Here, a multi-investigator, interdisciplinary effort was undertaken to examine the response of elephant seals to multiple stressors. An integrated physiological and ecological approach was taken, including immunology, stress physiology, toxicology...
Authors
Daniel P. Costa, Rachel R. Holser, Garrett T. Shipway, Arina B. Favilla, Birgitte I. McDonald, Daphne M. Shen, Amber R. Diluzio, Sarah H. Peterson, Joshua T. Ackerman, Daniel E. Crocker

Development of a two-stage lifecycle model to inform the trap-and-haul program for Oncorhynchus kisutch (coho salmon) in the Lewis River, Washington Development of a two-stage lifecycle model to inform the trap-and-haul program for Oncorhynchus kisutch (coho salmon) in the Lewis River, Washington

Restoration of salmon populations in the upper Lewis River Basin, Washington, depends on a trap-and-haul program owing to the Lewis River Hydroelectric Project (hereinafter referred to as “Project”) operated by PacifiCorp and Cowlitz Public Utilities District (hereinafter referred to as “Utilities”), which has been a barrier to salmon passage since the 1930s. Thus, sustaining the...
Authors
John M. Plumb, Russell W. Perry

A site prioritization tool for invasive species management: Integrating diverse spatial data to improve decision making A site prioritization tool for invasive species management: Integrating diverse spatial data to improve decision making

Resource managers are tasked with protecting natural areas from invasive species with limited resources. Further, invasive management goals can vary greatly based on different management priorities specific to management agencies or taxa of interest. The site prioritization tool for invasive species management addresses these challenges by creating a platform to view and combine diverse...
Authors
Janet S. Prevéy, Cameron J. Reimer, Peder S. Engelstad, Pairsa N. Belamaric, Terri Hogan, Jillian M. LaRoe, Colter J. Mumford, Jennifer L. Sieracki, Catherine S. Jarnevich
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