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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42878

Annual and inter-annual variability in the diffuse attenuation coefficient and turbidity in an urbanized Washington lake from 2013 to 2022 assessed using Landsat-8/9 Annual and inter-annual variability in the diffuse attenuation coefficient and turbidity in an urbanized Washington lake from 2013 to 2022 assessed using Landsat-8/9

Water clarity, defined in this study using measurements of the downwelling diffuse light attenuation coefficient (Kd) and turbidity, is an important indicator of lake trophic status and ecosystem health. We used in-situ measurements to evaluate existing semi-analytical models for Kd and turbidity, developed a regional turbidity model based on spectral shape, and evaluated the spatial and...
Authors
Jennifer A. Schulien, Tessa Julianne Code, Curtis L. DeGasperi, David Beauchamp, Arielle Tonus Ellis, Arni H. Litt

Impacts of acute and chronic suspended solids exposure on juvenile freshwater mussels Impacts of acute and chronic suspended solids exposure on juvenile freshwater mussels

Construction activities may affect adjacent water systems by introducing increased levels of suspended solids into the water body and may subsequently affect the survival and growth of freshwater mussels. We tested three sediment types from sites in Missouri, including Spring River sediment (SRS), Osage River bank clay soil (ORC), and quarried limestone from Columbia (LMT). We prepared...
Authors
Wenyu Zhu, James L. Kunz, Eric Brunson, Christopher M. Barnhart, Henry Brown, Stephen E. McMurray, Andy Roberts, Christopher Shulse, Kathleen Trauth, Bin Wang, Jeffery A. Steevens, Baolin Deng

Ammonia and aquatic ecosystems – A review of global sources, biogeochemical cycling, and effects on fish Ammonia and aquatic ecosystems – A review of global sources, biogeochemical cycling, and effects on fish

The purpose of this review is to better understand the full life cycle and influence of ammonia from an aquatic biology perspective. While ammonia has toxic properties in water and air, it also plays a central role in the biogeochemical nitrogen (N) cycle and regulates mechanisms of normal and abnormal fish physiology. Additionally, as the second most synthesized chemical on Earth...
Authors
Thea M. Edwards, Holly J. Puglis, Jonathan Lopez Duran, Lillian Bradshaw, Douglas B. Kent, Aida Farag

Climate-induced shifts in grassland bird nesting phenology have implications for grassland management Climate-induced shifts in grassland bird nesting phenology have implications for grassland management

Grasslands are among the most impacted ecosystems globally. In the midcontinent of North America, a > 80% loss of grasslands has made their conservation a major priority for resource managers. Grassland ecosystems evolved under periodic disturbances; consequently, grassland management often involves regular actions such as grazing, haying, or burning to maintain ecosystem integrity. The...
Authors
Michael J. Anteau, Kristen S. Ellis, Garrett J. MacDonald, Lawrence Igl, Neal D. Niemuth, Josh Vest

Conservation genomics of an endangered montane amphibian reveals low population structure, low genomic diversity and selection pressure from disease Conservation genomics of an endangered montane amphibian reveals low population structure, low genomic diversity and selection pressure from disease

Wildlife diseases are a major global threat to biodiversity. Boreal toads (Anaxyrus [Bufo] boreas) are a state-endangered species in the southern Rocky Mountains of Colorado and New Mexico, and a species of concern in Wyoming, largely due to lethal skin infections caused by the amphibian chytrid fungus Batrachochytrium dendrobatidis (Bd). We performed conservation and landscape genomic...
Authors
Daryl Trumbo, Bennett Hardy, Harry Crockett, Erin L. Muths, Brenna R. Forester, Rebecca Cheek, Shawna J Zimmerman, Sarah Corey-Rivas, Larissa L. Bailey, Chris Funk

An integrated framework for examining groundwater vulnerability in the Mekong River Delta region An integrated framework for examining groundwater vulnerability in the Mekong River Delta region

The Mekong River provides water, food security, and many other valuable benefits to the more than 60 million Southeast Asian residents living within its basin. However, the Mekong River Basin is increasingly stressed by changes in climate, land cover, and infrastructure. These changes can affect water quantity and quality and exacerbate related hazards such as land subsidence and...
Authors
Kathryn Powlen, Saira M. Haider, Kyle W. Davis, Nina Burkardt, Sachin D. Shah, Stephanie Romanach, Matthew E. Andersen

Seasonal and elevational differences by sex in capture rate of ʻōpeʻapeʻa (Lasiurus semotus) on Hawai‘i Island Seasonal and elevational differences by sex in capture rate of ʻōpeʻapeʻa (Lasiurus semotus) on Hawai‘i Island

The study of nocturnally active bats is difficult even for those species that seasonally congregate. This challenge is particularly acute for ‘ōpe‘ape‘a (Hawaiian hoary bat; Lasiurus semotus) because of its solitary foliage-roosting behavior. Yet surveys are essential for conservation and management of this endangered species and only land mammal endemic to the Hawaiian Islands. We...
Authors
Julia P. S. Hoeh, Aaron A. Aguirre, Flor A. Calderon, Sean P. Casler, Sarah G. Ciarrachi, Karen Courtot, Kristina Montoya-Aiona, Corinna A. Pinzari, P. Marcos Gorresen

Bayesian weighting of climate models based on climate sensitivity Bayesian weighting of climate models based on climate sensitivity

Using climate model ensembles containing members that exhibit very high climate sensitivities to increasing CO2 concentrations can result in biased projections. Various methods have been proposed to ameliorate this ‘hot model’ problem, such as model emulators or model culling. Here, we utilize Bayesian Model Averaging as a framework to address this problem without resorting to outright...
Authors
Elias Massoud, Huikyo Lee, Adam Terando, Michael Wehner

Comparing methods to estimate feral burro abundance Comparing methods to estimate feral burro abundance

Obtaining precise and unbiased estimates of feral burro (Equus asinus) abundance in the western United States is challenging due to their cryptic pelage and the rugged terrain they inhabit. Management agencies employ helicopter-based, simultaneous double-observer sightability surveys (hereafter denoted as DOS) to estimate abundance of burros; but the DOS method routinely produces...
Authors
Jacob D. Hennig, Kathryn A. Schoenecker

Alternative measures of trait–niche relationships: A test on dispersal traits in saproxylic beetles Alternative measures of trait–niche relationships: A test on dispersal traits in saproxylic beetles

Functional trait approaches are common in ecology, but a lack of clear hypotheses on how traits relate to environmental gradients (i.e., trait–niche relationships) often makes uncovering mechanisms difficult. Furthermore, measures of community functional structure differ in their implications, yet inferences are seldom compared among metrics. Community-weighted mean trait values (CWMs)...
Authors
Ryan C. Burner, Jörg G. Stephan, Lukas Drag, Mária Potterf, Tone Birkemoe, Juha Siitonen, Jörg Müller, Otso Ovaskainen, Anne Sverdrup-Thygeson, Tord Snäll

Ecological associations of non-native ungulates on the Hawaiian Island of Lāna‘i Ecological associations of non-native ungulates on the Hawaiian Island of Lāna‘i

Sustained-yield hunting of introduced ungulates in the Hawaiian Islands often conflicts with the conservation of native species, but there is little reliable data to guide effective management. European mouflon sheep (Ovis musimon; mouflon) and axis deer (Axis axis; deer) were introduced on the island of Lāna‘i to provide additional hunting opportunities. Managers will require better...
Authors
Steven C. Hess, Kevin W. Brinck, Christina R Leopold, Jacob Muise, Jonathan Sprague

Leaf litter decomposition and detrital communities following the removal of two large dams on the Elwha River (Washington, USA) Leaf litter decomposition and detrital communities following the removal of two large dams on the Elwha River (Washington, USA)

Large-scale dam removals provide opportunities to restore river function in the long-term and are massive disturbances to riverine ecosystems in the short-term. The removal of two dams on the Elwha River (WA, USA) between 2011 and 2014 was the largest dam removal project to be completed by that time and has since resulted in major changes to channel dynamics, river substrates, in-stream
Authors
Carri J. LeRoy, Sarah A. Morley, Jeffrey J. Duda, Alex A. Zinck, Paris J. Lamoureux, Cameron Pennell, Ali Bailey, Caitlyn Oswell, Mary Silva, Brandy K. Kamakawiwo’ole, Sorrel Hartford, Jacqueline Van Der Hout, Roger Peters, Rebecca Mahan, Justin Stapleton, Rachelle Carina Johnson, Melissa M. Foley
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